MGE detailed information
MGE type: Prophage MGE length: 44581 bp
Accession: NC_017656 Location: 1724419..1768999 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: chromosome
Accession: NC_017656 Location: 1724419..1768999 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECO55CA74_RS08615 () | 1720469..1721452 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECO55CA74_RS31845 () | 1721727..1721897 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| ECO55CA74_RS08625 () | 1721930..1723303 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| ECO55CA74_RS08630 () | 1723432..1724367 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECO55CA74_RS28375 () | 1724419..1725654 | - | 1236 | WP_000040839.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ECO55CA74_RS08640 () | 1725656..1725871 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECO55CA74_RS08645 () | 1725971..1726159 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1725975..1726153 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1725975..1726153 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1725975..1726153 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1725975..1726153 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECO55CA74_RS08650 () | 1726197..1726346 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECO55CA74_RS08655 () | 1726402..1727211 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| ECO55CA74_RS08660 () | 1727204..1729876 | - | 2673 | WP_000102126.1 | exodeoxyribonuclease VIII | - |
| ECO55CA74_RS08665 () | 1729969..1730157 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| ECO55CA74_RS08670 () | 1730154..1730342 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| ECO55CA74_RS08680 () | 1730832..1730984 | - | 153 | WP_000379610.1 | DUF1391 family protein | - |
| ECO55CA74_RS08685 () | 1731250..1731669 | - | 420 | WP_000362153.1 | hypothetical protein | - |
| ECO55CA74_RS08690 () | 1731770..1732051 | + | 282 | WP_000391950.1 | helix-turn-helix domain-containing protein | - |
| ECO55CA74_RS08695 () | 1732035..1732460 | + | 426 | WP_000693888.1 | Rha family transcriptional regulator | - |
| ECO55CA74_RS08700 () | 1732483..1733451 | + | 969 | WP_000095674.1 | helix-turn-helix domain-containing protein | - |
| ECO55CA74_RS08705 () | 1733458..1734198 | + | 741 | WP_000790459.1 | ATP-binding protein | - |
| ECO55CA74_RS08710 () | 1734228..1734998 | + | 771 | WP_000450861.1 | DUF1627 domain-containing protein | - |
| ECO55CA74_RS08715 () | 1735014..1735406 | + | 393 | WP_001141104.1 | DUF977 family protein | - |
| ECO55CA74_RS08720 () | 1735403..1735699 | + | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| ECO55CA74_RS08725 () | 1735696..1736304 | + | 609 | WP_001209468.1 | ead/Ea22-like family protein | - |
| ECO55CA74_RS30180 () | 1736402..1736878 | + | 477 | WP_000137945.1 | hypothetical protein | - |
| ECO55CA74_RS08735 () | 1737170..1737325 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ECO55CA74_RS08740 () | 1737570..1737929 | + | 360 | WP_001219082.1 | helix-turn-helix domain-containing protein | - |
| ECO55CA74_RS08745 () | 1737932..1738408 | + | 477 | WP_000284536.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ECO55CA74_RS30185 () | 1738841..1739119 | + | 279 | WP_032207160.1 | hypothetical protein | - |
| ECO55CA74_RS08755 () | 1739121..1740170 | + | 1050 | WP_001265237.1 | DUF968 domain-containing protein | - |
| ECO55CA74_RS08760 () | 1740183..1740542 | + | 360 | WP_001217425.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ECO55CA74_RS08765 () | 1740539..1741207 | + | 669 | WP_001064874.1 | antiterminator | - |
| ECO55CA74_RS08790 () | 1742469..1744415 | + | 1947 | WP_000874523.1 | DUF1737 domain-containing protein | - |
| ECO55CA74_RS08795 () | 1744553..1744732 | + | 180 | WP_014640514.1 | DUF1378 family protein | - |
| ECO55CA74_RS08800 () | 1744773..1745045 | + | 273 | WP_001290217.1 | DUF826 domain-containing protein | - |
| ECO55CA74_RS08805 () | 1745122..1745337 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| ECO55CA74_RS08810 () | 1745342..1745875 | + | 534 | WP_000087714.1 | lysozyme | - |
| ECO55CA74_RS08815 () | 1746150..1746719 | + | 570 | WP_001056883.1 | hypothetical protein | - |
| ECO55CA74_RS31600 () | 1746719..1746868 | + | 150 | WP_000455406.1 | hypothetical protein | - |
| ECO55CA74_RS31605 () | 1747096..1747302 | + | 207 | WP_123005736.1 | lysis system o-spanin lipoprotein Rz1 | - |
| ECO55CA74_RS31015 () | 1747331..1747483 | + | 153 | WP_001139680.1 | hypothetical protein | - |
| ECO55CA74_RS08835 () | 1747562..1747849 | + | 288 | WP_000343114.1 | hypothetical protein | - |
| ECO55CA74_RS31980 () | 1747926..1748102 | - | 177 | WP_171815854.1 | hypothetical protein | - |
| ECO55CA74_RS08845 () | 1748363..1748839 | + | 477 | WP_000373409.1 | DUF1441 family protein | - |
| ECO55CA74_RS08850 () | 1748836..1750959 | + | 2124 | WP_001077625.1 | phage terminase large subunit family protein | - |
| ECO55CA74_RS08855 () | 1750956..1751168 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| ECO55CA74_RS08860 () | 1751168..1752670 | + | 1503 | WP_000974568.1 | phage portal protein | - |
| ECO55CA74_RS08865 () | 1752615..1754639 | + | 2025 | WP_001114423.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| ECO55CA74_RS08870 () | 1754727..1755053 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| ECO55CA74_RS08875 () | 1755046..1755327 | + | 282 | WP_001281346.1 | DNA breaking-rejoining protein | - |
| ECO55CA74_RS08880 () | 1755330..1755953 | + | 624 | WP_000974951.1 | phage tail protein | - |
| ECO55CA74_RS08885 () | 1755966..1756364 | + | 399 | WP_000682718.1 | hypothetical protein | - |
| ECO55CA74_RS08890 () | 1756372..1757121 | + | 750 | WP_000235130.1 | phage tail protein | - |
| ECO55CA74_RS08895 () | 1757137..1757559 | + | 423 | WP_000479056.1 | phage minor tail protein G | - |
| ECO55CA74_RS08900 () | 1757586..1757894 | + | 309 | WP_000532075.1 | phage tail assembly protein T | - |
| ECO55CA74_RS08905 () | 1757938..1760583 | + | 2646 | WP_000918244.1 | phage tail tape measure protein | - |
| ECO55CA74_RS08910 () | 1760580..1760909 | + | 330 | WP_000847298.1 | phage tail protein | - |
| ECO55CA74_RS08915 () | 1760909..1761607 | + | 699 | WP_001419068.1 | phage minor tail protein L | - |
| ECO55CA74_RS08920 () | 1761618..1762361 | + | 744 | WP_014640516.1 | C40 family peptidase | - |
| ECO55CA74_RS08925 () | 1762307..1762942 | + | 636 | WP_139003283.1 | tail assembly protein | - |
| ECO55CA74_RS08930 () | 1763189..1766680 | + | 3492 | WP_000515151.1 | host specificity protein J | - |
| ECO55CA74_RS08935 () | 1766751..1767350 | + | 600 | WP_001230550.1 | hypothetical protein | VF |
| ECO55CA74_RS08940 () | 1767415..1768728 | + | 1314 | WP_000268808.1 | ISNCY family transposase KIS | Transposase |
| ECO55CA74_RS08945 () | 1768730..1768999 | + | 270 | WP_001023994.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECO55CA74_RS08950 () | 1769112..1769687 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| ECO55CA74_RS30205 () | 1769760..1770389 | + | 630 | WP_001359536.1 | DUF1076 domain-containing protein | - |
| ECO55CA74_RS08960 () | 1770471..1771112 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| ECO55CA74_RS08965 () | 1771693..1772127 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| ECO55CA74_RS08970 () | 1772268..1773401 | - | 1134 | WP_000837948.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|