MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94015 bp
Accession: NC_017653 Location: 1..94015 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: plasmid p12579_1
Accession: NC_017653 Location: 1..94015 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: plasmid p12579_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECO55CA74_RS26365 () | 207..428 | + | 222 | WP_000542386.1 | hypothetical protein | - |
| ECO55CA74_RS26370 () | 436..1467 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| ECO55CA74_RS26375 () | 1518..1829 | + | 312 | WP_001224250.1 | hypothetical protein | - |
| ECO55CA74_RS31335 () | 2022..2129 | - | 108 | WP_071595431.1 | Tn3 family transposase | - |
| ECO55CA74_RS31340 () | 2178..2817 | + | 640 | Protein_4 | recombinase family protein | - |
| ECO55CA74_RS26385 () | 2924..3325 | - | 402 | Protein_5 | ester cyclase | - |
| ECO55CA74_RS26390 () | 3334..4323 | - | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| ECO55CA74_RS26395 () | 4339..5115 | - | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| ECO55CA74_RS26400 () | 5334..5720 | + | 387 | WP_001276786.1 | Ref family protein | - |
| ECO55CA74_RS26405 () | 5910..6551 | + | 642 | WP_001376241.1 | hypothetical protein | - |
| ECO55CA74_RS26410 () | 6608..7911 | + | 1304 | Protein_10 | SIR2 family protein | - |
| ECO55CA74_RS26415 () | 7953..8201 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| ECO55CA74_RS26420 () | 8198..8638 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| ECO55CA74_RS26425 () | 8672..15439 | - | 6768 | WP_001038184.1 | N-6 DNA methylase | - |
| ECO55CA74_RS26430 () | 15515..17224 | + | 1710 | WP_000774696.1 | hypothetical protein | - |
| ECO55CA74_RS26435 () | 17217..18236 | + | 1020 | WP_000132938.1 | head processing protein | - |
| ECO55CA74_RS26445 () | 18528..19085 | - | 558 | WP_001345478.1 | lysozyme | - |
| ECO55CA74_RS26450 () | 19255..19743 | + | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| ECO55CA74_RS26455 () | 19941..20618 | + | 678 | WP_001376650.1 | DUF2829 domain-containing protein | - |
| ECO55CA74_RS26460 () | 20625..21407 | + | 783 | WP_000432105.1 | hypothetical protein | - |
| ECO55CA74_RS26465 () | 21436..21747 | - | 312 | WP_001165933.1 | hypothetical protein | - |
| ECO55CA74_RS26470 () | 21737..24724 | - | 2988 | WP_000058811.1 | hypothetical protein | - |
| ECO55CA74_RS26475 () | 24737..25102 | - | 366 | WP_000175482.1 | hypothetical protein | - |
| ECO55CA74_RS26480 () | 25099..27018 | - | 1920 | WP_000434678.1 | hypothetical protein | - |
| ECO55CA74_RS26485 () | 27020..27622 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| ECO55CA74_RS26490 () | 27609..28052 | - | 444 | WP_000580776.1 | hypothetical protein | - |
| ECO55CA74_RS26495 () | 28049..28378 | - | 330 | WP_000887652.1 | holin | - |
| ECO55CA74_RS29715 () | 28453..28716 | - | 264 | WP_000145199.1 | hypothetical protein | - |
| ECO55CA74_RS26500 () | 29152..29724 | - | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| ECO55CA74_RS29725 () | 29796..30263 | + | 468 | WP_023156928.1 | phage tail protein | - |
| ECO55CA74_RS26510 () | 30274..30780 | + | 507 | WP_014640494.1 | phage tail protein | - |
| ECO55CA74_RS29730 () | 30821..31294 | + | 474 | WP_014640495.1 | phage tail protein | - |
| ECO55CA74_RS29735 () | 31305..31763 | + | 459 | WP_001376654.1 | phage tail protein | - |
| ECO55CA74_RS26520 () | 31763..32374 | + | 612 | WP_000367943.1 | tail fiber assembly protein | - |
| ECO55CA74_RS30725 () | 32380..34530 | - | 2151 | WP_001000782.1 | tail fiber protein | - |
| ECO55CA74_RS26535 () | 34542..34976 | - | 435 | WP_001286325.1 | hypothetical protein | - |
| ECO55CA74_RS26540 () | 35055..35891 | - | 837 | WP_001189832.1 | hypothetical protein | - |
| ECO55CA74_RS26545 () | 35891..37324 | - | 1434 | WP_000047918.1 | bleomycin hydrolase | - |
| ECO55CA74_RS26550 () | 37321..37677 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| ECO55CA74_RS26555 () | 37677..41069 | - | 3393 | WP_000440170.1 | lytic transglycosylase domain-containing protein | - |
| ECO55CA74_RS26560 () | 41151..42032 | - | 882 | WP_000926345.1 | hypothetical protein | - |
| ECO55CA74_RS26565 () | 42047..42658 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| ECO55CA74_RS26570 () | 42669..43235 | - | 567 | WP_000188918.1 | hypothetical protein | - |
| ECO55CA74_RS26575 () | 43444..44223 | - | 780 | WP_000765490.1 | hypothetical protein | - |
| ECO55CA74_RS26580 () | 44231..44548 | - | 318 | WP_000908460.1 | hypothetical protein | - |
| ECO55CA74_RS29770 () | 45129..45350 | + | 222 | WP_000245703.1 | host cell division inhibitor Icd-like protein | - |
| ECO55CA74_RS26585 () | 45347..46390 | + | 1044 | WP_000743159.1 | phage antirepressor Ant | - |
| ECO55CA74_RS26590 () | 46554..47354 | + | 801 | WP_001187874.1 | phage antirepressor KilAC domain-containing protein | - |
| ECO55CA74_RS26595 () | 47384..48229 | + | 846 | WP_001376803.1 | hypothetical protein | - |
| ECO55CA74_RS26600 () | 48280..48525 | + | 246 | WP_001426344.1 | hypothetical protein | - |
| ECO55CA74_RS26605 () | 48707..48862 | + | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| ECO55CA74_RS26610 () | 48979..49488 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| ECO55CA74_RS27720 () | 49500..50081 | - | 582 | WP_000035301.1 | hypothetical protein | - |
| ECO55CA74_RS26620 () | 50117..50932 | - | 816 | WP_000041760.1 | hypothetical protein | - |
| ECO55CA74_RS26625 () | 50942..52531 | - | 1590 | WP_000085145.1 | hypothetical protein | - |
| ECO55CA74_RS26630 () | 52592..54298 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| ECO55CA74_RS26635 () | 54524..55525 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| ECO55CA74_RS26640 () | 55542..56738 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| ECO55CA74_RS26645 () | 56907..57716 | - | 810 | WP_001154683.1 | GIY-YIG nuclease family protein | - |
| ECO55CA74_RS26650 () | 58009..58893 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| ECO55CA74_RS26655 () | 59228..59620 | - | 393 | WP_001281116.1 | hypothetical protein | - |
| ECO55CA74_RS31885 () | 59632..59772 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| ECO55CA74_RS26665 () | 59798..60220 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| ECO55CA74_RS26670 () | 60260..61048 | - | 789 | WP_000890198.1 | hypothetical protein | - |
| ECO55CA74_RS30730 () | 61062..61214 | - | 153 | WP_161403143.1 | hypothetical protein | - |
| ECO55CA74_RS26680 () | 61511..61795 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| ECO55CA74_RS26685 () | 61788..62693 | + | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| ECO55CA74_RS26690 () | 62690..64708 | + | 2019 | WP_000660985.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| ECO55CA74_RS26720 () | 66683..67510 | + | 828 | WP_000751808.1 | hypothetical protein | - |
| ECO55CA74_RS26730 () | 67900..69264 | + | 1365 | WP_001276604.1 | replicative DNA helicase | - |
| ECO55CA74_RS26735 () | 69264..70262 | + | 999 | WP_001198662.1 | hypothetical protein | - |
| ECO55CA74_RS26740 () | 70309..70941 | - | 633 | WP_000535202.1 | baseplate protein | - |
| ECO55CA74_RS26745 () | 70934..71950 | - | 1017 | WP_000212018.1 | hypothetical protein | - |
| ECO55CA74_RS26750 () | 71952..72737 | - | 786 | WP_000602711.1 | hypothetical protein | - |
| ECO55CA74_RS26755 () | 72724..73452 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| ECO55CA74_RS26760 () | 73456..74673 | - | 1218 | WP_001141915.1 | hypothetical protein | - |
| ECO55CA74_RS26765 () | 74683..75060 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| ECO55CA74_RS26770 () | 75207..75452 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| ECO55CA74_RS26775 () | 75455..76033 | + | 579 | WP_000943608.1 | VRR-NUC domain-containing protein | - |
| ECO55CA74_RS26780 () | 76100..76255 | + | 156 | WP_000096174.1 | hypothetical protein | - |
| ECO55CA74_RS26790 () | 76757..77383 | + | 627 | WP_000484110.1 | norphogenetic protein | - |
| ECO55CA74_RS26795 () | 77380..78057 | + | 678 | WP_024174695.1 | metallophosphoesterase | - |
| ECO55CA74_RS26800 () | 78054..78755 | + | 702 | WP_000684868.1 | hypothetical protein | - |
| ECO55CA74_RS26810 () | 79057..80319 | + | 1263 | WP_000633036.1 | hypothetical protein | - |
| ECO55CA74_RS26815 () | 80392..80898 | + | 507 | WP_000021767.1 | hypothetical protein | - |
| ECO55CA74_RS26825 () | 81093..81476 | + | 384 | Protein_85 | morphogenetic protein | - |
| ECO55CA74_RS26830 () | 81473..81940 | + | 468 | Protein_86 | hypothetical protein | - |
| ECO55CA74_RS26835 () | 81937..82635 | + | 699 | WP_000154832.1 | ead/Ea22-like family protein | - |
| ECO55CA74_RS26840 () | 82632..82922 | + | 291 | WP_001018057.1 | DUF4752 family protein | - |
| ECO55CA74_RS26845 () | 82919..83632 | + | 714 | WP_000672529.1 | hypothetical protein | - |
| ECO55CA74_RS26850 () | 83629..83928 | + | 300 | WP_000215167.1 | hypothetical protein | - |
| ECO55CA74_RS26855 () | 83930..84616 | + | 687 | WP_000161573.1 | ead/Ea22-like family protein | - |
| ECO55CA74_RS32060 () | 84618..84767 | + | 150 | WP_001151811.1 | hypothetical protein | - |
| ECO55CA74_RS26860 () | 84771..85787 | + | 1017 | WP_000208040.1 | hypothetical protein | - |
| ECO55CA74_RS26865 () | 85771..86055 | + | 285 | WP_001142394.1 | hypothetical protein | - |
| ECO55CA74_RS29790 () | 86040..86249 | - | 210 | WP_001344848.1 | hypothetical protein | - |
| ECO55CA74_RS26875 () | 86423..86674 | + | 252 | WP_001283837.1 | DNA polymerase III subunit theta | - |
| ECO55CA74_RS26880 () | 86798..87187 | + | 390 | WP_000506726.1 | DNA repair protein | - |
| ECO55CA74_RS26885 () | 87260..87481 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ECO55CA74_RS26890 () | 87481..87861 | + | 381 | WP_001216047.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| ECO55CA74_RS26895 () | 87866..88045 | + | 180 | WP_000113019.1 | hypothetical protein | - |
| ECO55CA74_RS26900 () | 88073..89116 | + | 1044 | WP_000644102.1 | DUF968 domain-containing protein | - |
| ECO55CA74_RS26905 () | 89205..89657 | + | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| ECO55CA74_RS26910 () | 89744..90937 | + | 1194 | WP_000219608.1 | hypothetical protein | - |
| ECO55CA74_RS26915 () | 90937..92421 | + | 1485 | WP_000124150.1 | terminase | - |
| ECO55CA74_RS26920 () | 92446..93297 | - | 852 | WP_000611656.1 | hypothetical protein | - |
| ECO55CA74_RS26925 () | 93408..93617 | - | 210 | WP_000874154.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|