NC_0176451..160573

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 160573 bp
Accession: NC_017645        Location: 1..160573         Organism: Escherichia coli UMNK88       Replicon: plasmid pUMNK88


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
UMNK88_RS28370 () 323..862 + 540 WP_001447712.1 hypothetical protein -
UMNK88_RS28375 () 867..1154 + 288 WP_000127321.1 hypothetical protein -
UMNK88_RS28380 () 1139..2239 + 1101 WP_000350011.1 plasmid replication protein -
UMNK88_RS28390 () 3276..3710 - 435 WP_000883925.1 hypothetical protein -
UMNK88_RS28395 () 3728..4843 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
UMNK88_RS28400 () 5112..5720 + 609 WP_000849071.1 hypothetical protein -
UMNK88_RS28405 () 5725..6246 + 522 WP_000393785.1 hypothetical protein -
UMNK88_RS28410 () 6249..6770 + 522 WP_000805800.1 hypothetical protein -
UMNK88_RS28415 () 6867..7340 + 474 WP_000057877.1 hypothetical protein -
UMNK88_RS28420 () 7351..7644 + 294 WP_001370730.1 hypothetical protein -
UMNK88_RS28425 () 7649..8503 + 855 WP_000539392.1 hypothetical protein -
UMNK88_RS28430 () 8503..9462 + 960 WP_000829616.1 S49 family peptidase -
UMNK88_RS28435 () 9478..10338 + 861 WP_000139698.1 DsbA family protein -
UMNK88_RS28440 () 10372..10800 + 429 WP_000591074.1 hypothetical protein -
UMNK88_RS28445 () 10857..11216 + 360 WP_000422768.1 hypothetical protein -
UMNK88_RS28450 () 11216..11662 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
UMNK88_RS28455 () 11659..12177 + 519 WP_000210756.1 nitrite reductase -
UMNK88_RS28460 () 12177..12407 + 231 WP_000972663.1 hypothetical protein -
UMNK88_RS28465 () 12394..13251 + 858 WP_001167032.1 hypothetical protein -
UMNK88_RS28470 () 13277..13465 + 189 WP_001270411.1 hypothetical protein -
UMNK88_RS28475 () 13482..14009 + 528 WP_001236377.1 thermonuclease family protein -
UMNK88_RS28480 () 14067..14339 + 273 WP_001043047.1 HU family DNA-binding protein -
UMNK88_RS28485 () 14427..14720 + 294 WP_001239997.1 chromosome segregation protein ParM -
UMNK88_RS28490 () 14747..15049 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
UMNK88_RS28495 () 15054..15404 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
UMNK88_RS28500 () 15567..16115 + 549 WP_001061574.1 transcriptional regulator -
UMNK88_RS32945 () 16456..16650 + 195 WP_000343597.1 hypothetical protein -
UMNK88_RS32950 () 16661..17032 + 372 WP_000516916.1 hypothetical protein -
UMNK88_RS28520 () 17025..17495 + 471 WP_001281821.1 hypothetical protein -
UMNK88_RS28525 () 17510..17845 - 336 WP_000683476.1 hypothetical protein -
UMNK88_RS28530 () 17942..18430 + 489 WP_001273096.1 DUF1643 domain-containing protein -
UMNK88_RS28535 () 18433..18930 + 498 WP_000062185.1 hypothetical protein -
UMNK88_RS28540 () 19145..19849 - 705 WP_024250745.1 IS6 family transposase IS26 Transposase
UMNK88_RS28545 () 19914..20093 - 180 Protein_33 helix-turn-helix transcriptional regulator -
UMNK88_RS28550 () 20400..21104 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
UMNK88_RS34160 () 21110..21250 + 141 WP_001044210.1 hypothetical protein -
UMNK88_RS28555 () 21735..22472 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
UMNK88_RS28560 () 22469..22693 + 225 WP_000743213.1 hypothetical protein -
UMNK88_RS28565 () 22904..24397 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
UMNK88_RS34565 () 24866..25312 + 447 Protein_39 DUF3363 domain-containing protein -
UMNK88_RS28575 () 25529..26743 + 1215 WP_000214123.1 Inner membrane transport protein YdhC ARG
UMNK88_RS28580 () 26771..27076 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
UMNK88_RS33625 () 27188..27376 + 189 Protein_42 IS91 family transposase -
UMNK88_RS28585 () 27343..28542 - 1200 WP_000804063.1 Tetracycline resistance protein, class C ARG
UMNK88_RS28590 () 28648..29298 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
UMNK88_RS28595 () 29330..29572 - 243 WP_000844627.1 transposase -
UMNK88_RS28605 () 29878..30714 - 837 WP_000480968.1 hypothetical protein ARG
UMNK88_RS28610 () 30714..31517 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
UMNK88_RS28615 () 31578..32393 - 816 WP_001043260.1 Dihydropteroate synthase ARG
UMNK88_RS28620 () 32700..33011 + 312 WP_000338945.1 hypothetical protein -
UMNK88_RS28625 () 33185..33970 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
UMNK88_RS28630 () 33974..35155 + 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
UMNK88_RS28635 () 35204..35476 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
UMNK88_RS28640 () 35529..36164 - 636 WP_000074431.1 N-6 DNA methylase -
UMNK88_RS34165 () 36256..36399 - 144 WP_000939033.1 hypothetical protein -
UMNK88_RS28645 () 36726..37103 + 378 WP_001125904.1 hypothetical protein -
UMNK88_RS34540 () 37096..37377 + 282 WP_000044823.1 hypothetical protein -
UMNK88_RS28655 () 37352..38026 + 675 WP_000344149.1 hypothetical protein -
UMNK88_RS28660 () 38094..38525 + 432 WP_001326170.1 hypothetical protein -
UMNK88_RS28665 () 38531..38842 + 312 WP_001447539.1 hypothetical protein -
UMNK88_RS28670 () 38851..39351 + 501 WP_000647188.1 hypothetical protein -
UMNK88_RS28675 () 39355..40782 + 1428 WP_000936897.1 DNA cytosine methyltransferase -
UMNK88_RS28680 () 40782..41438 + 657 WP_000268552.1 hypothetical protein -
UMNK88_RS28685 () 41494..42111 + 618 WP_000464630.1 hypothetical protein -
UMNK88_RS28695 () 42323..42622 + 300 WP_001326171.1 hypothetical protein -
UMNK88_RS28700 () 42713..43201 - 489 WP_000467110.1 hypothetical protein -
UMNK88_RS28705 () 43216..45408 - 2193 WP_000366823.1 DNA topoisomerase 3 -
UMNK88_RS28710 () 45408..45641 - 234 WP_001191890.1 hypothetical protein -
UMNK88_RS28715 () 45623..46240 - 618 WP_001249395.1 hypothetical protein -
UMNK88_RS29430 () 46408..49380 + 2973 WP_001326173.1 hypothetical protein Relaxase
UMNK88_RS28725 () 49377..51242 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
UMNK88_RS28730 () 51253..51837 + 585 WP_000332868.1 hypothetical protein -
UMNK88_RS28735 () 51794..52423 + 630 WP_000743449.1 DUF4400 domain-containing protein -
UMNK88_RS28740 () 52433..52879 + 447 WP_000122507.1 hypothetical protein -
UMNK88_RS28745 () 52889..53266 + 378 WP_000869297.1 hypothetical protein -
UMNK88_RS28750 () 53266..53928 + 663 WP_001231464.1 hypothetical protein -
UMNK88_RS34545 () 54109..54252 + 144 WP_001275801.1 hypothetical protein -
UMNK88_RS28755 () 54252..54629 + 378 WP_001326174.1 hypothetical protein -
UMNK88_RS28760 () 54774..55055 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
UMNK88_RS28765 () 55052..55678 + 627 WP_001049717.1 hypothetical protein -
UMNK88_RS28770 () 55662..56579 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
UMNK88_RS28775 () 56579..57892 + 1314 WP_024131605.1 conjugal transfer protein TraB -
UMNK88_RS28780 () 57889..58467 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
UMNK88_RS28785 () 58471..58863 + 393 WP_000479535.1 hypothetical protein -
UMNK88_RS28790 () 59144..60399 + 1256 Protein_84 IS1380 family transposase ISEcp1 Transposase
UMNK88_RS28800 () 60723..61868 + 1146 WP_000976514.1 Beta-lactamase ARG
UMNK88_RS28805 () 61962..62495 + 534 WP_001221666.1 lipocalin family protein -
UMNK88_RS28810 () 62492..62809 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
UMNK88_RS28815 () 63537..69023 + 5487 WP_000606835.1 DUF4165 domain-containing protein -
UMNK88_RS28820 () 69172..69879 + 708 WP_015674844.1 DsbC family protein -
UMNK88_RS28825 () 69876..72323 + 2448 WP_000637384.1 type IV secretion system protein TraC -
UMNK88_RS28830 () 72338..72655 + 318 WP_000351984.1 hypothetical protein -
UMNK88_RS28835 () 72652..73182 + 531 WP_001010740.1 S26 family signal peptidase -
UMNK88_RS28840 () 73145..74410 + 1266 WP_001447719.1 conjugal transfer protein TraW -
UMNK88_RS28845 () 74407..75078 + 672 WP_000575345.1 EAL domain-containing protein -
UMNK88_RS28850 () 75075..76082 + 1008 WP_000983282.1 TraU family protein -
UMNK88_RS28855 () 76186..78993 + 2808 WP_001447718.1 conjugal transfer mating pair stabilization protein TraN -
UMNK88_RS28860 () 79032..79892 - 861 WP_000709517.1 hypothetical protein -
UMNK88_RS28865 () 80015..80656 - 642 WP_000796664.1 hypothetical protein -
UMNK88_RS28870 () 80951..81271 + 321 WP_000547566.1 hypothetical protein -
UMNK88_RS28875 () 81575..81760 + 186 WP_001186917.1 hypothetical protein -
UMNK88_RS28880 () 81980..82948 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
UMNK88_RS28885 () 82959..83867 + 909 WP_000739139.1 hypothetical protein -
UMNK88_RS28890 () 83928..84458 + 531 WP_000987165.1 single-stranded DNA-binding protein -
UMNK88_RS28895 () 84553..85542 + 990 WP_001282585.1 phage recombination protein Bet -
UMNK88_RS28900 () 85605..86615 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
UMNK88_RS28905 () 86815..88092 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
UMNK88_RS28910 () 88177..89973 + 1797 WP_000039319.1 VWA domain-containing protein -
UMNK88_RS32030 () 90035..90370 + 336 WP_001447572.1 hypothetical protein -
UMNK88_RS28915 () 90635..91174 + 540 WP_000018872.1 hypothetical protein -
UMNK88_RS28920 () 91265..91765 + 501 WP_000793769.1 hypothetical protein -
UMNK88_RS28925 () 91839..92723 + 885 WP_000477209.1 hypothetical protein -
UMNK88_RS28930 () 92789..93013 + 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
UMNK88_RS28935 () 93075..93464 + 390 WP_000026577.1 hypothetical protein -
UMNK88_RS32955 () 93454..93906 + 453 WP_001176699.1 hypothetical protein -
UMNK88_RS34170 () 93984..94226 - 243 WP_002210529.1 hypothetical protein -
UMNK88_RS28950 () 94244..94435 + 192 WP_000651508.1 hypothetical protein -
UMNK88_RS28955 () 94480..94857 + 378 WP_001337696.1 hypothetical protein -
UMNK88_RS28960 () 95049..95393 + 345 WP_000209093.1 hypothetical protein -
UMNK88_RS28965 () 95471..95773 + 303 WP_000410925.1 hypothetical protein -
UMNK88_RS28970 () 95851..97476 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
UMNK88_RS28975 () 97537..97968 + 432 WP_000687894.1 hypothetical protein -
UMNK88_RS28980 () 98042..98596 + 555 WP_001093867.1 hypothetical protein -
UMNK88_RS28985 () 98829..99215 + 387 WP_000042274.1 hypothetical protein -
UMNK88_RS28990 () 99303..101756 + 2454 WP_001187969.1 phosphoadenosine phosphosulfate reductase -
UMNK88_RS28995 () 101958..102161 + 204 WP_000050847.1 hypothetical protein -
UMNK88_RS29000 () 102233..102838 + 606 WP_000071870.1 5'-deoxynucleotidase -
UMNK88_RS29005 () 102831..103100 + 270 WP_000184110.1 hypothetical protein -
UMNK88_RS29010 () 103114..103332 + 219 WP_000260293.1 hypothetical protein -
UMNK88_RS29015 () 103406..103963 + 558 WP_000064432.1 hypothetical protein -
UMNK88_RS29020 () 104038..104889 + 852 WP_000595210.1 hypothetical protein -
UMNK88_RS29025 () 105348..105734 + 387 WP_001077336.1 hypothetical protein -
UMNK88_RS29030 () 105912..107639 + 1728 WP_000122922.1 toprim domain-containing protein -
UMNK88_RS29035 () 107626..107904 + 279 WP_000268337.1 hypothetical protein -
UMNK88_RS29040 () 107977..108198 + 222 WP_000714163.1 hypothetical protein -
UMNK88_RS29045 () 108380..109384 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
UMNK88_RS29050 () 109463..112435 - 2973 WP_001138073.1 Tn3 family transposase TnpA_TnAs3 Transposase
UMNK88_RS29055 () 112438..112995 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
UMNK88_RS29065 () 113301..114314 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
UMNK88_RS29070 () 114460..115218 + 759 WP_024250748.1 Streptomycin 3''-adenylyltransferase ARG
UMNK88_RS32040 () 115327..115572 + 246 WP_032492013.1 DUF1010 domain-containing protein -
UMNK88_RS29075 () 115591..115929 + 339 WP_011977801.1 integrase -
UMNK88_RS29080 () 116219..117478 + 1260 WP_012300772.1 Bicyclomycin resistance protein ARG
UMNK88_RS29085 () 117571..118362 + 792 WP_001261740.1 Streptomycin 3''-adenylyltransferase ARG
UMNK88_RS29090 () 118486..118833 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
UMNK88_RS29095 () 118827..119666 + 840 WP_000259031.1 Dihydropteroate synthase ARG
UMNK88_RS29100 () 119794..120294 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
UMNK88_RS29105 () 120829..121611 - 783 WP_001163403.1 IS21 family transposase IS1326 Transposase
UMNK88_RS29110 () 121601..123124 - 1524 WP_001324342.1 IS21 family transposase IS1326 Transposase
UMNK88_RS29115 () 123247..124791 + 1545 WP_000287615.1 IS3 family transposase IS1353 Transposase
UMNK88_RS29120 () 124842..125702 - 861 WP_000344784.1 TniB family NTP-binding protein -
UMNK88_RS29125 () 125705..126139 - 435 Protein_151 Mu transposase C-terminal domain-containing protein -
UMNK88_RS29135 () 126193..126896 - 704 Protein_152 IS6 family transposase IS26 Transposase
UMNK88_RS29140 () 127106..128095 - 990 WP_001276635.1 putative signaling protein VF
UMNK88_RS29145 () 128092..128328 - 237 WP_001087810.1 broad-spectrum mercury transporter MerE -
UMNK88_RS29150 () 128325..128690 - 366 WP_000995361.1 mercury resistance co-regulator MerD -
UMNK88_RS29155 () 128802..129440 - 639 WP_000761850.1 organomercurial lyase MerB -
UMNK88_RS29160 () 129455..131140 - 1686 WP_000149288.1 mercury(II) reductase -
UMNK88_RS29165 () 131212..131487 - 276 WP_000732290.1 mercury resistance system periplasmic binding protein MerP -
UMNK88_RS29170 () 131503..131853 - 351 WP_001294666.1 mercuric transport protein MerT -
UMNK88_RS29175 () 131925..132359 + 435 WP_000414383.1 IS607 family transposase ISChh1 Transposase
UMNK88_RS29180 () 132459..133463 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
UMNK88_RS34275 () 133740..133859 + 120 Protein_162 permease -
UMNK88_RS34280 () 133869..133985 + 117 WP_000338626.1 hypothetical protein -
UMNK88_RS29185 () 134106..134480 + 375 WP_000868820.1 hypothetical protein -
UMNK88_RS29190 () 134594..135319 + 726 WP_000988731.1 hypothetical protein -
UMNK88_RS29195 () 135452..139705 + 4254 WP_001257735.1 RHS repeat protein -
UMNK88_RS29200 () 139677..140117 + 441 WP_001326394.1 hypothetical protein -
UMNK88_RS34290 () 140288..140740 + 453 Protein_168 hypothetical protein -
UMNK88_RS29210 () 140756..141358 - 603 WP_000278322.1 hypothetical protein -
UMNK88_RS29215 () 141628..141909 + 282 WP_000575657.1 hypothetical protein -
UMNK88_RS29225 () 142208..142744 + 537 WP_000949433.1 hypothetical protein -
UMNK88_RS29230 () 142747..143757 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
UMNK88_RS29235 () 143762..144631 + 870 WP_000997323.1 3'-5' exonuclease -
UMNK88_RS29240 () 144628..145119 + 492 WP_000139717.1 hypothetical protein -
UMNK88_RS29245 () 145446..146321 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
UMNK88_RS29250 () 146483..147523 + 1041 WP_000101568.1 DNA-binding protein -
UMNK88_RS29260 () 147810..149321 + 1512 WP_000811656.1 ATP-dependent helicase -
UMNK88_RS29265 () 149432..150472 + 1041 WP_001326396.1 conjugal transfer protein TraF -
UMNK88_RS29270 () 150474..151907 + 1434 WP_000256129.1 conjugal transfer protein TraH -
UMNK88_RS29275 () 151920..155534 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
UMNK88_RS29280 () 155572..155934 - 363 WP_000683483.1 hypothetical protein -
UMNK88_RS29285 () 156651..156923 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
UMNK88_RS29290 () 156923..157456 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
UMNK88_RS29295 () 157467..158075 + 609 WP_000891157.1 hypothetical protein -
UMNK88_RS29300 () 158072..158623 + 552 WP_001020646.1 hypothetical protein -
UMNK88_RS29305 () 158683..159102 - 420 WP_000651490.1 H-NS histone family protein -
UMNK88_RS29310 () 159104..159397 - 294 WP_000919078.1 hypothetical protein -
UMNK88_RS29315 () 159414..160397 - 984 WP_000077458.1 ParM/StbA family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance