MGE detailed information
MGE type: Conjugative plasmid MGE length: 102536 bp
Accession: NC_017637 Location: 1..102536 Organism: Escherichia coli W Replicon: plasmid pRK1
Accession: NC_017637 Location: 1..102536 Organism: Escherichia coli W Replicon: plasmid pRK1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECW_RS27350 () | 17..331 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| ECW_RS24505 () | 715..1242 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| ECW_RS24510 () | 1299..1532 | + | 234 | WP_001042947.1 | DUF905 domain-containing protein | - |
| ECW_RS24515 () | 1594..3552 | + | 1959 | WP_000117798.1 | ParB/RepB/Spo0J family partition protein | - |
| ECW_RS24520 () | 3607..4041 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| ECW_RS24525 () | 4038..4757 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| ECW_RS24530 () | 4754..5350 | + | 597 | WP_000978014.1 | hypothetical protein | - |
| ECW_RS24540 () | 5813..6313 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| ECW_RS24555 () | 8488..8922 | + | 435 | WP_000218859.1 | hypothetical protein | - |
| ECW_RS24560 () | 9016..9282 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| ECW_RS24565 () | 9347..10237 | + | 891 | WP_000038398.1 | Recombination-promoting nuclease RpnA | VF |
| ECW_RS27360 () | 10237..10458 | + | 222 | WP_014358130.1 | hypothetical protein | - |
| ECW_RS24570 () | 10489..10740 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| ECW_RS28060 () | 10774..10971 | - | 198 | WP_001161109.1 | hypothetical protein | - |
| ECW_RS24580 () | 11322..12170 | + | 849 | WP_001077028.1 | DUF4942 domain-containing protein | - |
| ECW_RS24585 () | 12256..12591 | - | 336 | WP_000157097.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| ECW_RS24590 () | 12825..13157 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| ECW_RS24595 () | 13168..15867 | + | 2700 | WP_001350015.1 | Protein TraI | Relaxase |
| ECW_RS24600 () | 15904..18195 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| ECW_RS24605 () | 18188..19258 | - | 1071 | WP_000151587.1 | IncI1-type conjugal transfer protein TrbB | - |
| ECW_RS24610 () | 19277..20485 | - | 1209 | WP_000121272.1 | IncI1-type conjugal transfer protein TrbA | - |
| ECW_RS24615 () | 20747..21655 | - | 909 | WP_000055084.1 | hypothetical protein | - |
| ECW_RS28065 () | 22447..22623 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| ECW_RS24635 () | 22833..23024 | - | 192 | WP_001147208.1 | hemolysin expression modulator Hha | - |
| ECW_RS24640 () | 23090..23704 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ECW_RS24645 () | 23780..25948 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| ECW_RS24650 () | 26045..26629 | - | 585 | WP_001037990.1 | IncI1-type conjugal transfer protein TraX | - |
| ECW_RS24655 () | 26658..27860 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| ECW_RS24660 () | 27827..28441 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| ECW_RS24665 () | 28441..31485 | - | 3045 | WP_001024787.1 | IncI1-type conjugal transfer protein TraU | - |
| ECW_RS24670 () | 31575..32375 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| ECW_RS24675 () | 32359..32547 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| ECW_RS24680 () | 32611..33015 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| ECW_RS24685 () | 33066..33593 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| ECW_RS24690 () | 33593..34297 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| ECW_RS24695 () | 34297..35586 | - | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| ECW_RS24700 () | 35589..36572 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| ECW_RS24705 () | 36583..37275 | - | 693 | WP_000138549.1 | DotI/IcmL family type IV secretion protein | - |
| ECW_RS24710 () | 37272..37619 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| ECW_RS24715 () | 37637..41404 | - | 3768 | WP_001141538.1 | hypothetical protein | - |
| ECW_RS24720 () | 41494..42045 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| ECW_RS26795 () | 42060..42350 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| ECW_RS24725 () | 42347..43495 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| ECW_RS24730 () | 43492..44310 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| ECW_RS24735 () | 44307..44765 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| ECW_RS24740 () | 45160..45744 | - | 585 | WP_000977526.1 | histidine phosphatase family protein | - |
| ECW_RS24745 () | 45804..47006 | - | 1203 | WP_000976350.1 | conjugal transfer protein TraF | - |
| ECW_RS24750 () | 47092..47916 | - | 825 | WP_001238943.1 | hypothetical protein | - |
| ECW_RS27370 () | 48124..48249 | + | 126 | Protein_49 | transposase | - |
| ECW_RS24755 () | 48306..49598 | - | 1293 | WP_001350014.1 | hypothetical protein | VF |
| ECW_RS24760 () | 49598..50254 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| ECW_RS24765 () | 50239..50799 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| ECW_RS24770 () | 50809..51423 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| ECW_RS24775 () | 51440..52525 | - | 1086 | WP_001208804.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| ECW_RS24780 () | 52538..54091 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| ECW_RS24785 () | 54102..54554 | - | 453 | WP_001236383.1 | hypothetical protein | VF |
| ECW_RS24790 () | 54541..55836 | - | 1296 | WP_000752792.1 | type 4b pilus protein PilO2 | - |
| ECW_RS24795 () | 55829..57511 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| ECW_RS24800 () | 57525..57962 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| ECW_RS24805 () | 57962..59029 | - | 1068 | WP_001350013.1 | hypothetical protein | VF |
| ECW_RS24810 () | 60043..60297 | - | 255 | WP_001113622.1 | PilI type IV pilus biogenesis protein | - |
| ECW_RS24815 () | 60461..61144 | - | 684 | WP_000213860.1 | hypothetical protein | - |
| ECW_RS24820 () | 61398..61931 | - | 534 | WP_001350011.1 | transcription termination factor NusG | - |
| ECW_RS24825 () | 62373..62660 | - | 288 | WP_000074853.1 | hypothetical protein | - |
| ECW_RS25205 () | 62578..62841 | - | 264 | Protein_65 | ash family protein | - |
| ECW_RS24840 () | 63813..64844 | + | 1032 | WP_000907868.1 | replication initiation protein | - |
| ECW_RS24845 () | 65748..66032 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| ECW_RS24850 () | 66032..66307 | + | 276 | WP_000421267.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECW_RS24855 () | 66413..66700 | + | 288 | WP_001105072.1 | hypothetical protein | - |
| ECW_RS28070 () | 66891..67157 | - | 267 | WP_000627834.1 | hypothetical protein | - |
| ECW_RS24865 () | 67157..67651 | - | 495 | WP_001350009.1 | hypothetical protein | - |
| ECW_RS24870 () | 67707..68309 | - | 603 | WP_000517697.1 | hypothetical protein | - |
| ECW_RS24875 () | 68663..70009 | + | 1347 | WP_001132027.1 | hypothetical protein | - |
| ECW_RS24880 () | 70287..70973 | + | 687 | Protein_74 | colicin-Ia domain protein | - |
| ECW_RS24885 () | 71162..72349 | - | 1188 | WP_001350007.1 | IS91 family transposase ISEc37 | Transposase |
| ECW_RS24890 () | 72349..72714 | - | 366 | WP_000124136.1 | hypothetical protein | - |
| ECW_RS24895 () | 73428..73724 | + | 297 | WP_049789836.1 | Major pilu subunit operon regulatory protein PapB | VF |
| ECW_RS24900 () | 73766..74308 | + | 543 | WP_001350006.1 | hypothetical protein | VF |
| ECW_RS24905 () | 74365..76767 | + | 2403 | WP_000466170.1 | Outer membrane usher protein YraJ | VF |
| ECW_RS24910 () | 76760..77536 | + | 777 | WP_000044490.1 | Chaperone protein FaeE | VF |
| ECW_RS24915 () | 77571..78062 | + | 492 | WP_000753462.1 | hypothetical protein | VF |
| ECW_RS24920 () | 78299..79156 | + | 858 | WP_000751748.1 | K88 fimbrial protein AD | VF |
| ECW_RS24925 () | 79252..79722 | + | 471 | WP_001123022.1 | hypothetical protein | VF |
| ECW_RS24930 () | 79944..81536 | + | 1593 | WP_001350003.1 | hypothetical protein | - |
| ECW_RS24935 () | 81571..82695 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| ECW_RS24940 () | 82695..82985 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| ECW_RS24950 () | 83488..83817 | + | 330 | WP_001137792.1 | IS66 family transposase ISEc49 | Transposase |
| ECW_RS24955 () | 83804..84184 | + | 381 | WP_000957247.1 | IS66 family transposase ISEc49 | Transposase |
| ECW_RS24960 () | 84227..85810 | + | 1584 | WP_000355318.1 | IS66 family transposase ISEc49 | Transposase |
| ECW_RS28075 () | 85824..85967 | - | 144 | WP_000877738.1 | hypothetical protein | - |
| ECW_RS24965 () | 86339..87340 | + | 1002 | WP_000785695.1 | DUF4238 domain-containing protein | - |
| ECW_RS24970 () | 87514..87858 | - | 345 | WP_000792769.1 | hypothetical protein | - |
| ECW_RS24975 () | 88357..88611 | - | 255 | WP_000678528.1 | hypothetical protein | - |
| ECW_RS24980 () | 88661..89587 | - | 927 | WP_001290414.1 | hypothetical protein | - |
| ECW_RS24985 () | 90120..90470 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| ECW_RS24990 () | 90529..91350 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| ECW_RS24995 () | 91350..92129 | + | 780 | WP_000147282.1 | site-specific integrase | - |
| ECW_RS25000 () | 92310..92954 | + | 645 | WP_001144036.1 | ParA family protein | - |
| ECW_RS25005 () | 93041..93349 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| ECW_RS25010 () | 93763..94743 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| ECW_RS25015 () | 94736..95152 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| ECW_RS25020 () | 95154..96428 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| ECW_RS25025 () | 96428..96865 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ECW_RS25030 () | 96862..97110 | - | 249 | WP_000618103.1 | DinI-like family protein | - |
| ECW_RS25035 () | 97528..98430 | + | 903 | WP_125075260.1 | DUF1281 domain-containing protein | - |
| ECW_RS27390 () | 98427..98738 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| ECW_RS25045 () | 98814..99497 | + | 684 | WP_000086148.1 | DNA methylase | - |
| ECW_RS25050 () | 99498..99719 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| ECW_RS25055 () | 99733..100167 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| ECW_RS28080 () | 100213..100989 | + | 777 | WP_001005028.1 | hypothetical protein | - |
| ECW_RS27400 () | 101523..101825 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| ECW_RS25070 () | 101872..102294 | + | 423 | WP_000271691.1 | DUF1380 family protein | - |
| ECW_RS25075 () | 102291..102482 | + | 192 | WP_001027495.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|