MGE detailed information
MGE type: Genomic_island MGE length: 21013 bp
Accession: NC_017634 Location: 1541740..1562752 Organism: Escherichia coli O83:H1 str. NRG 857C Replicon: chromosome
Accession: NC_017634 Location: 1541740..1562752 Organism: Escherichia coli O83:H1 str. NRG 857C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRG857_RS07535 () | 1537501..1538901 | - | 1401 | WP_000358943.1 | glutamate decarboxylase | - |
| NRG857_RS07540 () | 1539263..1540420 | - | 1158 | Protein_1475 | insulinase family protein | - |
| NRG857_RS07545 () | 1540440..1540565 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| NRG857_RS07550 () | 1540531..1541688 | - | 1158 | WP_001445446.1 | anaerobic sulfatase maturase | - |
| NRG857_RS07555 () | 1541740..1543422 | - | 1683 | WP_001296072.1 | sulfatase | - |
| NRG857_RS07560 () | 1543824..1544585 | - | 762 | WP_000060473.1 | acid stress response transcriptional regulator YdeO | - |
| NRG857_RS07565 () | 1544661..1544858 | - | 198 | WP_001445447.1 | two-component system connector SafA | - |
| NRG857_RS07570 () | 1545106..1547385 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| NRG857_RS07575 () | 1547724..1548638 | - | 915 | WP_000520591.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| NRG857_RS07580 () | 1548698..1549201 | - | 504 | WP_000825470.1 | Protein FimG | VF |
| NRG857_RS07585 () | 1549214..1549744 | - | 531 | WP_000876774.1 | Protein FimF | VF |
| NRG857_RS07590 () | 1549758..1552409 | - | 2652 | WP_014640148.1 | Outer membrane usher protein FimD | VF |
| NRG857_RS07595 () | 1552451..1553161 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| NRG857_RS07600 () | 1553523..1554086 | - | 564 | WP_001296074.1 | Type-1 fimbrial protein, A chain | VF |
| NRG857_RS07605 () | 1554862..1555644 | - | 783 | WP_001221834.1 | SDR family oxidoreductase | - |
| NRG857_RS07610 () | 1555793..1556686 | + | 894 | Protein_1489 | HTH-type transcriptional regulator PgrR | VF |
| NRG857_RS07615 () | 1556935..1557999 | - | 1065 | WP_000859695.1 | alpha/beta fold hydrolase | - |
| NRG857_RS07620 () | 1558157..1558918 | - | 762 | WP_001066621.1 | carboxymuconolactone decarboxylase family protein | - |
| NRG857_RS07625 () | 1558896..1559375 | - | 480 | WP_015912499.1 | cupin domain-containing protein | - |
| NRG857_RS07630 () | 1559380..1560015 | - | 636 | WP_044069244.1 | Transcriptional activator protein CopR | VF |
| NRG857_RS23580 () | 1560064..1560836 | + | 773 | Protein_1494 | alpha/beta hydrolase | - |
| NRG857_RS07640 () | 1561146..1562468 | - | 1323 | WP_001125432.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| NRG857_RS07645 () | 1562468..1562734 | - | 267 | WP_001304368.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| NRG857_RS07650 () | 1563042..1563800 | + | 759 | WP_001286543.1 | trans-aconitate 2-methyltransferase | - |
| NRG857_RS07655 () | 1563804..1564718 | - | 915 | WP_001313828.1 | bestrophin family inner membrane protein | - |
| NRG857_RS07660 () | 1564915..1566366 | - | 1452 | WP_000854639.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA10098 | NZ_CP007799 | 1694571..1711514 | 0.01 |