MGE detailed information
MGE type: Genomic_island MGE length: 11745 bp
Accession: NC_017633 Location: 1699662..1711406 Organism: Escherichia coli ETEC H10407 Replicon: chromosome
Accession: NC_017633 Location: 1699662..1711406 Organism: Escherichia coli ETEC H10407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETEC_RS08545 () | 1696477..1698162 | - | 1686 | WP_000628585.1 | ABC transporter ATP-binding protein/permease | - |
| ETEC_RS30585 () | 1698365..1698487 | + | 123 | WP_120795387.1 | protein YneP | - |
| ETEC_RS08550 () | 1698453..1699610 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| ETEC_RS08555 () | 1699662..1701344 | - | 1683 | WP_014639910.1 | sulfatase | - |
| ETEC_RS08560 () | 1701746..1702507 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| ETEC_RS08565 () | 1702582..1702779 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| ETEC_RS08570 () | 1703027..1705306 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| ETEC_RS08575 () | 1705640..1706554 | - | 915 | WP_000520666.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| ETEC_RS08580 () | 1706613..1707116 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| ETEC_RS08585 () | 1707129..1707641 | - | 513 | WP_044519720.1 | type 1 fimbrial protein | - |
| ETEC_RS08595 () | 1707732..1708960 | + | 1229 | WP_149006549.1 | IS3 family transposase IS2 | Transposase |
| ETEC_RS08600 () | 1709009..1709533 | - | 525 | Protein_1631 | Outer membrane usher protein FimD | VF |
| ETEC_RS08605 () | 1709836..1711140 | - | 1305 | WP_001125437.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| ETEC_RS08610 () | 1711140..1711406 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| ETEC_RS08615 () | 1711629..1713029 | - | 1401 | WP_001083595.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |