MGE detailed information
MGE type: Prophage MGE length: 55397 bp
Accession: NC_017626 Location: 1755914..1811310 Organism: Escherichia coli 042 Replicon: chromosome
Accession: NC_017626 Location: 1755914..1811310 Organism: Escherichia coli 042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC042_RS08785 () | 1750930..1751364 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| EC042_RS08790 () | 1751384..1751767 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| EC042_RS08795 () | 1751799..1752017 | + | 219 | WP_000803529.1 | multiple antibiotic resistance protein MarB | - |
| EC042_RS08800 () | 1752048..1752947 | - | 900 | WP_000087219.1 | O-acetylserine/cysteine exporter | - |
| EC042_RS08805 () | 1753142..1754329 | + | 1188 | WP_001054157.1 | efflux MFS transporter YdeE | - |
| EC042_RS08810 () | 1754456..1754551 | + | 96 | WP_000901367.1 | protein MgtS | - |
| EC042_RS08815 () | 1754769..1755659 | - | 891 | WP_000592808.1 | diguanylate cyclase DgcZ | - |
| EC042_RS08820 () | 1755914..1756306 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| EC042_RS08830 () | 1756671..1758716 | - | 2046 | WP_014639190.1 | peptidyl-dipeptidase Dcp | - |
| EC042_RS08835 () | 1758853..1759599 | + | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| EC042_RS08840 () | 1759688..1760374 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| EC042_RS08845 () | 1760551..1760754 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EC042_RS08850 () | 1760790..1762250 | - | 1461 | WP_000527823.1 | mannitol dehydrogenase family protein | - |
| EC042_RS08855 () | 1762340..1763623 | - | 1284 | Protein_1675 | MHS family MFS transporter YdfJ | - |
| EC042_RS30105 () | 1764227..1764340 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| EC042_RS08860 () | 1764409..1764642 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EC042_RS08865 () | 1764960..1765550 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EC042_RS08870 () | 1765648..1766223 | - | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| EC042_RS27835 () | 1766223..1769186 | - | 2964 | WP_000279152.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EC042_RS08895 () | 1769251..1769850 | - | 600 | WP_001230379.1 | Outer membrane protein X | VF |
| EC042_RS08900 () | 1769920..1773333 | - | 3414 | WP_000515372.1 | host specificity protein J | - |
| EC042_RS08905 () | 1773394..1774026 | - | 633 | WP_000090891.1 | tail assembly protein | - |
| EC042_RS08910 () | 1773963..1774706 | - | 744 | WP_000194780.1 | C40 family peptidase | - |
| EC042_RS08915 () | 1774712..1775410 | - | 699 | WP_001152624.1 | phage minor tail protein L | - |
| EC042_RS08920 () | 1775410..1775739 | - | 330 | WP_000847331.1 | phage tail protein | - |
| EC042_RS08925 () | 1775736..1778314 | - | 2579 | Protein_1687 | phage tail tape measure protein | - |
| EC042_RS08930 () | 1778307..1778741 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| EC042_RS08935 () | 1778723..1779145 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| EC042_RS08940 () | 1779161..1779901 | - | 741 | WP_014639191.1 | phage tail protein | - |
| EC042_RS08945 () | 1779909..1780304 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| EC042_RS08950 () | 1780301..1780879 | - | 579 | WP_000975067.1 | phage tail protein | - |
| EC042_RS08955 () | 1780891..1781244 | - | 354 | WP_000753007.1 | head-tail joining protein | - |
| EC042_RS08960 () | 1781256..1781654 | - | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| EC042_RS08965 () | 1781696..1782721 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| EC042_RS08970 () | 1782777..1783109 | - | 333 | WP_001295978.1 | head decoration protein | - |
| EC042_RS08975 () | 1783119..1784438 | - | 1320 | WP_000123272.1 | S49 family peptidase | - |
| EC042_RS08980 () | 1784419..1786020 | - | 1602 | WP_001676384.1 | phage portal protein | - |
| EC042_RS08985 () | 1786017..1786223 | - | 207 | Protein_1699 | gpW family protein | - |
| EC042_RS08990 () | 1786220..1788145 | - | 1926 | WP_001027316.1 | phage terminase large subunit family protein | - |
| EC042_RS08995 () | 1788120..1788665 | - | 546 | WP_000453576.1 | DNA-packaging protein | - |
| EC042_RS09005 () | 1789054..1789287 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EC042_RS09010 () | 1789345..1789755 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EC042_RS09015 () | 1789907..1790080 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EC042_RS09020 () | 1790252..1790407 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| EC042_RS30115 () | 1790487..1790552 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| EC042_RS27840 () | 1790555..1790743 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EC042_RS09025 () | 1790754..1790966 | - | 213 | WP_000072434.1 | cold shock protein CspI | - |
| EC042_RS09030 () | 1791329..1791742 | - | 414 | WP_041031799.1 | DUF2514 family protein | - |
| EC042_RS09035 () | 1791700..1792248 | - | 549 | WP_001092972.1 | lysozyme | - |
| EC042_RS09040 () | 1792245..1792556 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EC042_RS09045 () | 1792561..1792776 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EC042_RS09050 () | 1793530..1793745 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EC042_RS09055 () | 1794046..1794258 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EC042_RS30120 () | 1794313..1794402 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EC042_RS09060 () | 1794680..1795432 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EC042_RS09065 () | 1795446..1796495 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EC042_RS09070 () | 1796497..1796775 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EC042_RS09075 () | 1796842..1797093 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| EC042_RS09080 () | 1797310..1797465 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC042_RS09085 () | 1797537..1797824 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EC042_RS09090 () | 1797824..1798063 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EC042_RS27845 () | 1798088..1798393 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| EC042_RS09095 () | 1798737..1798928 | + | 192 | WP_000211628.1 | FlxA-like family protein | - |
| EC042_RS09100 () | 1799365..1800678 | - | 1314 | WP_000589008.1 | ISNCY family transposase ISCARN112 | Transposase |
| EC042_RS30930 () | 1801447..1801734 | - | 288 | Protein_1726 | hypothetical protein | - |
| EC042_RS09115 () | 1802345..1802701 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EC042_RS09120 () | 1802698..1803120 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| EC042_RS09125 () | 1803161..1804126 | - | 966 | WP_000054515.1 | hypothetical protein | - |
| EC042_RS09130 () | 1804107..1804628 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| EC042_RS09135 () | 1804612..1804842 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EC042_RS09140 () | 1804926..1805333 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EC042_RS09145 () | 1805500..1805655 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EC042_RS09150 () | 1805815..1806033 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| EC042_RS09160 () | 1806601..1806789 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EC042_RS09165 () | 1806786..1806977 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EC042_RS09170 () | 1807070..1809541 | + | 2472 | WP_000048341.1 | exonuclease | - |
| EC042_RS09175 () | 1809614..1809865 | + | 252 | WP_000005555.1 | excisionase family protein | - |
| EC042_RS09180 () | 1809900..1811180 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EC042_RS29420 () | 1811200..1811310 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| EC042_RS09185 () | 1811368..1812387 | - | 1020 | WP_000836033.1 | Zn-dependent oxidoreductase | - |
| EC042_RS09190 () | 1812399..1813613 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EC042_RS09195 () | 1813819..1814145 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| EC042_RS09200 () | 1814280..1814621 | + | 342 | WP_000705206.1 | DUF1283 family protein | - |
| EC042_RS09205 () | 1814656..1815216 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EC042_RS09210 () | 1815219..1815929 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|