MGE detailed information
MGE type: Prophage MGE length: 45942 bp
Accession: NC_017626 Location: 1533695..1579636 Organism: Escherichia coli 042 Replicon: chromosome
Accession: NC_017626 Location: 1533695..1579636 Organism: Escherichia coli 042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC042_RS07715 () | 1529745..1530728 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EC042_RS07725 () | 1531206..1532579 | + | 1374 | WP_000123753.1 | ATP-dependent RNA helicase DbpA | - |
| EC042_RS07730 () | 1532708..1533643 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EC042_RS27735 () | 1533695..1534930 | - | 1236 | WP_000040836.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EC042_RS07740 () | 1534932..1535147 | - | 216 | WP_000079601.1 | excisionase XisR | - |
| EC042_RS07745 () | 1535247..1535435 | - | 189 | WP_001383994.1 | DUF1187 family protein | - |
| - () | 1535251..1535429 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1535251..1535429 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1535251..1535429 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1535251..1535429 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EC042_RS07750 () | 1535428..1535622 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EC042_RS07755 () | 1535686..1536774 | - | 1089 | WP_001516464.1 | recombinase RecT | - |
| EC042_RS07760 () | 1536789..1539812 | - | 3024 | WP_000105115.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| EC042_RS07765 () | 1539914..1540189 | - | 276 | WP_001516463.1 | phage protein | - |
| EC042_RS07770 () | 1540264..1540440 | - | 177 | WP_000245522.1 | hypothetical protein | - |
| EC042_RS07775 () | 1540434..1540655 | - | 222 | WP_000560230.1 | killing protein KilR | - |
| EC042_RS07780 () | 1541086..1541574 | + | 489 | WP_014639167.1 | superinfection exclusion B family protein | - |
| EC042_RS07785 () | 1541571..1541726 | - | 156 | WP_001169146.1 | DUF1391 family protein | - |
| EC042_RS26980 () | 1542160..1542579 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| EC042_RS07795 () | 1542659..1542913 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| EC042_RS07800 () | 1542910..1543332 | + | 423 | WP_000693802.1 | hypothetical protein | - |
| EC042_RS07805 () | 1543345..1544202 | + | 858 | WP_000899759.1 | DUF1376 domain-containing protein | - |
| EC042_RS07810 () | 1544209..1544955 | + | 747 | WP_000788766.1 | ATP-binding protein | - |
| EC042_RS07815 () | 1544978..1545739 | + | 762 | WP_000450696.1 | DUF1627 domain-containing protein | - |
| EC042_RS07820 () | 1545755..1546171 | + | 417 | WP_001151236.1 | DUF977 family protein | - |
| EC042_RS07825 () | 1546356..1547021 | + | 666 | WP_021554705.1 | epoxyqueuosine reductase QueH | - |
| EC042_RS07830 () | 1547259..1547414 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC042_RS07835 () | 1547881..1548480 | + | 600 | WP_000940322.1 | DUF1367 family protein | - |
| EC042_RS07840 () | 1548480..1548770 | + | 291 | WP_000228021.1 | DUF1364 domain-containing protein | - |
| EC042_RS07845 () | 1548767..1549303 | + | 537 | WP_000640127.1 | DUF1133 family protein | - |
| EC042_RS07860 () | 1550596..1550811 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| EC042_RS07865 () | 1550811..1551308 | + | 498 | WP_001135280.1 | lysozyme RrrD | - |
| EC042_RS29385 () | 1551525..1551710 | + | 186 | WP_001228693.1 | Rz1 family lipoprotein | - |
| EC042_RS07875 () | 1551907..1553364 | + | 1458 | WP_001097899.1 | Trk system potassium transporter TrkG | - |
| EC042_RS07880 () | 1553502..1554293 | + | 792 | WP_001291096.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EC042_RS07885 () | 1554286..1555218 | + | 933 | WP_001204030.1 | hypothetical protein | - |
| EC042_RS07890 () | 1555154..1555405 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| EC042_RS07895 () | 1555409..1556503 | + | 1095 | WP_000089437.1 | terminase small subunit | - |
| EC042_RS07900 () | 1556484..1557785 | + | 1302 | WP_000625349.1 | terminase family protein | - |
| EC042_RS07905 () | 1557788..1559194 | + | 1407 | WP_000763705.1 | DUF4055 domain-containing protein | - |
| EC042_RS07910 () | 1559178..1560290 | + | 1113 | WP_024165603.1 | hypothetical protein | - |
| EC042_RS07915 () | 1560395..1561159 | + | 765 | WP_000770040.1 | hypothetical protein | - |
| EC042_RS07920 () | 1561258..1562397 | + | 1140 | WP_000918489.1 | hypothetical protein | - |
| EC042_RS07925 () | 1562440..1562664 | + | 225 | WP_000908083.1 | hypothetical protein | - |
| EC042_RS07930 () | 1562668..1563063 | + | 396 | WP_000634207.1 | hypothetical protein | - |
| EC042_RS07935 () | 1563063..1563446 | + | 384 | WP_000524258.1 | hypothetical protein | - |
| EC042_RS07940 () | 1563447..1563827 | + | 381 | WP_001029818.1 | hypothetical protein | - |
| EC042_RS07945 () | 1563824..1564216 | + | 393 | WP_000144682.1 | hypothetical protein | - |
| EC042_RS07950 () | 1564243..1565205 | + | 963 | WP_000094291.1 | hypothetical protein | - |
| EC042_RS07955 () | 1565356..1565715 | + | 360 | WP_122984268.1 | hypothetical protein | - |
| EC042_RS07965 () | 1566187..1569420 | + | 3234 | WP_000840612.1 | phage tail tape measure protein | - |
| EC042_RS07970 () | 1569413..1569751 | + | 339 | WP_000024053.1 | phage tail protein | - |
| EC042_RS07975 () | 1569751..1570449 | + | 699 | WP_001152480.1 | phage minor tail protein L | - |
| EC042_RS07980 () | 1570454..1571197 | + | 744 | WP_000194743.1 | C40 family peptidase | - |
| EC042_RS07985 () | 1571095..1571742 | + | 648 | WP_011703559.1 | tail assembly protein | - |
| EC042_RS07990 () | 1571803..1575198 | + | 3396 | WP_000515284.1 | host specificity protein J | - |
| EC042_RS07995 () | 1575266..1575865 | + | 600 | WP_001228228.1 | Outer membrane protein X | VF |
| EC042_RS08000 () | 1575930..1578305 | + | 2376 | WP_000741766.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EC042_RS08005 () | 1578305..1578586 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| EC042_RS08010 () | 1578596..1579636 | + | 1041 | WP_001353819.1 | tail fiber domain-containing protein | - |
| EC042_RS08015 () | 1579679..1579972 | + | 294 | WP_000355601.1 | hypothetical protein | - |
| EC042_RS27755 () | 1579992..1580111 | + | 120 | Protein_1514 | tail fiber assembly protein | - |
| EC042_RS08020 () | 1580324..1581181 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EC042_RS08025 () | 1581178..1582035 | - | 858 | WP_001101725.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EC042_RS08030 () | 1582032..1582859 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EC042_RS08035 () | 1582859..1583773 | - | 915 | WP_000555618.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|