MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NC_017625 Location: 3968762..3988790 Organism: Escherichia coli DH1 Replicon: chromosome
Accession: NC_017625 Location: 3968762..3988790 Organism: Escherichia coli DH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECDH1_RS19590 () | 3964241..3964744 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| ECDH1_RS19595 () | 3964757..3965287 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| ECDH1_RS19600 () | 3965297..3967933 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| ECDH1_RS19605 () | 3968000..3968725 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| ECDH1_RS19610 () | 3968762..3969301 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| ECDH1_RS19615 () | 3969366..3969914 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| ECDH1_RS19625 () | 3970396..3971010 | - | 615 | WP_038404959.1 | Tyrosine recombinase XerD | VF |
| ECDH1_RS19630 () | 3971003..3971700 | - | 698 | Protein_3743 | IS1 family transposase IS1A | Transposase |
| ECDH1_RS19635 () | 3972246..3972848 | - | 603 | WP_000790589.1 | Tyrosine recombinase XerC | VF |
| ECDH1_RS19650 () | 3974304..3975020 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECDH1_RS19655 () | 3975040..3976146 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ECDH1_RS19660 () | 3976211..3977191 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECDH1_RS19665 () | 3977774..3979014 | - | 1241 | Protein_3748 | helicase YjhR | - |
| ECDH1_RS25865 () | 3979130..3979375 | + | 246 | Protein_3749 | GNAT family N-acetyltransferase | - |
| ECDH1_RS19680 () | 3979752..3980009 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ECDH1_RS19685 () | 3980021..3980566 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ECDH1_RS19690 () | 3980622..3981368 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ECDH1_RS25400 () | 3981537..3981755 | + | 219 | Protein_3753 | hypothetical protein | - |
| ECDH1_RS26055 () | 3981793..3981909 | + | 117 | Protein_3754 | VOC family protein | - |
| ECDH1_RS19695 () | 3982154..3983275 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ECDH1_RS19700 () | 3983272..3983550 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECDH1_RS19705 () | 3983562..3984875 | + | 1314 | WP_000460842.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECDH1_RS19710 () | 3984888..3985694 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECDH1_RS19715 () | 3985825..3986256 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| ECDH1_RS19720 () | 3986268..3986900 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECDH1_RS19725 () | 3986917..3987699 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECDH1_RS19730 () | 3988002..3988790 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| ECDH1_RS19735 () | 3988795..3989700 | + | 906 | WP_000714564.1 | dihydrodipicolinate synthase family protein | - |
| ECDH1_RS19740 () | 3989711..3991678 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| ECDH1_RS19745 () | 3991785..3993134 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|