MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91728 bp
Accession: NC_017580 Location: 1..91728 Organism: Shewanella baltica OS117 Replicon: plasmid pSBAL11702
Accession: NC_017580 Location: 1..91728 Organism: Shewanella baltica OS117 Replicon: plasmid pSBAL11702
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBAL117_RS23725 () | 30..248 | + | 219 | WP_014620912.1 | helix-turn-helix domain-containing protein | - |
| SBAL117_RS23730 () | 432..2189 | + | 1758 | WP_148258344.1 | hypothetical protein | Relaxase |
| SBAL117_RS23735 () | 2189..2716 | + | 528 | WP_014620914.1 | DUF2857 family protein | - |
| SBAL117_RS23740 () | 2703..3347 | + | 645 | WP_014620915.1 | TIGR03761 family integrating conjugative element protein | - |
| SBAL117_RS23745 () | 3356..4108 | + | 753 | WP_014620916.1 | hypothetical protein | - |
| SBAL117_RS23750 () | 4717..5613 | + | 897 | WP_014620917.1 | hypothetical protein | - |
| SBAL117_RS23755 () | 5650..5913 | + | 264 | WP_014620918.1 | hypothetical protein | - |
| SBAL117_RS25245 () | 6085..6399 | + | 315 | Protein_7 | hypothetical protein | - |
| SBAL117_RS23760 () | 6400..6591 | - | 192 | WP_014620457.1 | hypothetical protein | - |
| SBAL117_RS23770 () | 6938..8509 | + | 1572 | WP_014620920.1 | hypothetical protein | - |
| SBAL117_RS23775 () | 8615..9145 | + | 531 | WP_131524927.1 | hypothetical protein | - |
| SBAL117_RS23780 () | 9200..9883 | + | 684 | WP_014620922.1 | hypothetical protein | - |
| SBAL117_RS23785 () | 9946..10335 | + | 390 | WP_014620923.1 | hypothetical protein | - |
| SBAL117_RS23790 () | 10706..11692 | + | 987 | WP_041409236.1 | Abi family protein | - |
| SBAL117_RS23795 () | 11739..12245 | + | 507 | WP_014620925.1 | superinfection exclusion B family protein | - |
| SBAL117_RS23800 () | 12500..16063 | + | 3564 | WP_014620926.1 | hypothetical protein | - |
| SBAL117_RS23805 () | 16351..16980 | - | 630 | WP_014620928.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SBAL117_RS23810 () | 17230..18135 | + | 906 | WP_158306873.1 | XRE family transcriptional regulator | - |
| SBAL117_RS25250 () | 18419..19914 | + | 1496 | Protein_18 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS25255 () | 19967..21467 | + | 1501 | Protein_19 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS23830 () | 21457..22203 | + | 747 | WP_011839978.1 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS23835 () | 22308..23054 | + | 747 | WP_011839978.1 | IS21 family transposase ISSba11 | Transposase |
| SBAL117_RS23840 () | 23476..24399 | - | 924 | WP_014620930.1 | phage integrase | - |
| SBAL117_RS23850 () | 24966..25244 | + | 279 | WP_014620932.1 | hypothetical protein | - |
| SBAL117_RS23855 () | 25241..25822 | + | 582 | WP_014620933.1 | DUF2913 family protein | - |
| SBAL117_RS23860 () | 25920..26396 | - | 477 | WP_014620934.1 | DUF417 family protein | - |
| SBAL117_RS23865 () | 26582..27083 | + | 502 | Protein_26 | hypothetical protein | - |
| SBAL117_RS23870 () | 27132..27581 | + | 450 | WP_014620936.1 | single-stranded DNA-binding protein | - |
| SBAL117_RS23875 () | 27584..27895 | + | 312 | WP_014620937.1 | hypothetical protein | - |
| SBAL117_RS23880 () | 27905..30040 | + | 2136 | WP_014620938.1 | DNA topoisomerase III | - |
| SBAL117_RS23885 () | 30365..30796 | + | 432 | WP_011839988.1 | DUF3577 domain-containing protein | - |
| SBAL117_RS23890 () | 30899..31219 | + | 321 | WP_014620939.1 | hypothetical protein | - |
| SBAL117_RS23895 () | 31308..31601 | + | 294 | WP_049793086.1 | hypothetical protein | - |
| SBAL117_RS23900 () | 31728..32021 | + | 294 | WP_014620941.1 | hypothetical protein | - |
| SBAL117_RS23905 () | 32102..32440 | + | 339 | WP_148258341.1 | hypothetical protein | - |
| SBAL117_RS23910 () | 32677..33267 | - | 591 | WP_011839983.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| SBAL117_RS23915 () | 33428..36412 | + | 2985 | WP_011846847.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| SBAL117_RS24690 () | 36452..37651 | + | 1200 | WP_014620943.1 | hypothetical protein | VF |
| SBAL117_RS23925 () | 37651..39114 | + | 1464 | WP_014620944.1 | type II and III secretion system protein | - |
| SBAL117_RS23930 () | 39111..40256 | + | 1146 | WP_014620945.1 | hypothetical protein | - |
| SBAL117_RS23935 () | 40270..40902 | + | 633 | WP_014620946.1 | hypothetical protein | - |
| SBAL117_RS23940 () | 40895..42493 | + | 1599 | WP_014620947.1 | Flp pilus assembly complex ATPase component TadA | - |
| SBAL117_RS23945 () | 42490..43494 | + | 1005 | WP_014620948.1 | hypothetical protein | - |
| SBAL117_RS23950 () | 43538..44107 | + | 570 | WP_014620949.1 | hypothetical protein | - |
| SBAL117_RS23955 () | 44107..44589 | + | 483 | WP_014620950.1 | hypothetical protein | - |
| SBAL117_RS23960 () | 44645..45574 | + | 930 | WP_014620951.1 | type II secretion system GspH family protein | - |
| SBAL117_RS23965 () | 45590..46285 | + | 696 | WP_014620952.1 | hypothetical protein | - |
| SBAL117_RS23970 () | 46390..46644 | + | 255 | WP_014620953.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SBAL117_RS23975 () | 46644..46985 | + | 342 | WP_014620954.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| SBAL117_RS23980 () | 47068..48060 | + | 993 | WP_014620955.1 | trypsin-like serine protease | - |
| SBAL117_RS23985 () | 48281..48967 | + | 687 | WP_014620956.1 | hypothetical protein | - |
| SBAL117_RS23990 () | 48964..49662 | + | 699 | WP_014620957.1 | TIGR03759 family integrating conjugative element protein | - |
| SBAL117_RS23995 () | 49671..50171 | + | 501 | WP_131524925.1 | hypothetical protein | VF |
| SBAL117_RS24000 () | 50164..50571 | + | 408 | WP_014620959.1 | integrating conjugative element protein | - |
| SBAL117_RS25740 () | 50671..50844 | + | 174 | WP_014620960.1 | hypothetical protein | - |
| SBAL117_RS24005 () | 50828..52435 | + | 1608 | WP_014620961.1 | PcfJ domain-containing protein | - |
| SBAL117_RS24010 () | 52425..53009 | + | 585 | WP_041409240.1 | hypothetical protein | - |
| SBAL117_RS24015 () | 53015..55153 | + | 2139 | WP_014620962.1 | type IV conjugative transfer system coupling protein TraD | - |
| SBAL117_RS24020 () | 55143..55799 | + | 657 | WP_014620963.1 | DUF4400 domain-containing protein | - |
| SBAL117_RS24025 () | 55818..56153 | + | 336 | WP_014620964.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SBAL117_RS24030 () | 56226..56540 | + | 315 | WP_014620965.1 | helix-turn-helix domain-containing protein | - |
| SBAL117_RS24035 () | 56555..56866 | + | 312 | WP_014620966.1 | hypothetical protein | - |
| SBAL117_RS24040 () | 56890..57129 | + | 240 | WP_014620967.1 | hypothetical protein | - |
| SBAL117_RS24045 () | 57407..58000 | + | 594 | WP_014620968.1 | tyrosine-type recombinase/integrase | - |
| SBAL117_RS24050 () | 58165..59268 | + | 1104 | WP_014620969.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SBAL117_RS24055 () | 59249..59809 | + | 561 | Protein_65 | PIN domain-containing protein | - |
| SBAL117_RS24060 () | 59865..61436 | + | 1572 | WP_014620970.1 | type I restriction-modification system subunit M | - |
| SBAL117_RS24065 () | 61433..62641 | + | 1209 | WP_014620971.1 | restriction endonuclease subunit S | - |
| SBAL117_RS24070 () | 62730..63731 | + | 1002 | WP_012588478.1 | Fic family protein | - |
| SBAL117_RS24075 () | 63795..66908 | + | 3114 | WP_014620972.1 | type I restriction endonuclease subunit R | - |
| SBAL117_RS24080 () | 67420..67734 | + | 315 | WP_014620973.1 | hypothetical protein | - |
| SBAL117_RS24085 () | 67727..67966 | + | 240 | WP_014620974.1 | TIGR03758 family integrating conjugative element protein | - |
| SBAL117_RS24090 () | 67968..68336 | + | 369 | WP_014620975.1 | DUF2976 domain-containing protein | - |
| SBAL117_RS24095 () | 68336..68677 | + | 342 | WP_014620976.1 | DUF3487 family protein | - |
| SBAL117_RS24100 () | 68670..69086 | + | 417 | WP_014620977.1 | hypothetical protein | - |
| SBAL117_RS24105 () | 69086..69415 | + | 330 | WP_014620978.1 | hypothetical protein | - |
| SBAL117_RS24110 () | 69412..70059 | + | 648 | WP_014620979.1 | TIGR03746 family integrating conjugative element protein | - |
| SBAL117_RS24115 () | 70056..70901 | + | 846 | WP_014620980.1 | TIGR03749 family integrating conjugative element protein | - |
| SBAL117_RS24120 () | 70891..72300 | + | 1410 | WP_014620981.1 | TIGR03752 family integrating conjugative element protein | - |
| SBAL117_RS24125 () | 72287..72700 | + | 414 | WP_014620982.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| SBAL117_RS24130 () | 72700..75426 | + | 2727 | WP_014620983.1 | conjugative transfer ATPase | - |
| SBAL117_RS24135 () | 75462..76376 | + | 915 | WP_148258345.1 | TIGR03756 family integrating conjugative element protein | - |
| SBAL117_RS24140 () | 76390..77643 | + | 1254 | WP_014620985.1 | integrating conjugative element protein | - |
| SBAL117_RS24145 () | 77640..77954 | + | 315 | WP_014620986.1 | hypothetical protein | - |
| SBAL117_RS24150 () | 77966..79546 | + | 1581 | WP_158306874.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SBAL117_RS24155 () | 79549..79773 | - | 225 | WP_014620988.1 | hypothetical protein | - |
| SBAL117_RS24160 () | 80011..81225 | + | 1215 | WP_014620989.1 | ParA family protein | - |
| SBAL117_RS24695 () | 81228..82238 | + | 1011 | WP_014620990.1 | plasmid partitioning protein B | - |
| SBAL117_RS24175 () | 83216..83791 | + | 576 | WP_014620991.1 | DUF3275 family protein | - |
| SBAL117_RS24180 () | 83860..84948 | + | 1089 | WP_014620992.1 | type I restriction-modification system subunit M | - |
| SBAL117_RS24185 () | 85016..85648 | + | 633 | WP_014620993.1 | hypothetical protein | - |
| SBAL117_RS24190 () | 85645..87930 | + | 2286 | WP_014620994.1 | DEAD/DEAH box helicase family protein | - |
| SBAL117_RS24195 () | 87997..88368 | + | 372 | WP_014620995.1 | DUF957 domain-containing protein | - |
| SBAL117_RS24200 () | 89474..90526 | + | 1053 | WP_014620996.1 | replication initiation protein | - |
| SBAL117_RS24205 () | 90542..90874 | - | 333 | WP_014620997.1 | helix-turn-helix transcriptional regulator | - |
| SBAL117_RS24700 () | 91339..91674 | - | 336 | WP_014620998.1 | ISNCY family transposase ISH7A | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|