MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 72460 bp
Accession: NC_017565 Location: 1..72460 Organism: Yersinia enterocolitica subsp. palearctica Y11 Replicon: plasmid pYV03
Accession: NC_017565 Location: 1..72460 Organism: Yersinia enterocolitica subsp. palearctica Y11 Replicon: plasmid pYV03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y11_RS20700 () | 891..1436 | - | 546 | WP_005165559.1 | hypothetical protein | - |
| Y11_RS20705 () | 1544..2269 | - | 726 | WP_014609442.1 | IS21 family transposase ISYen2A | Transposase |
| Y11_RS20710 () | 2256..3758 | - | 1503 | WP_014609443.1 | IS21 family transposase ISYen2B | Transposase |
| Y11_RS20715 () | 3991..4458 | + | 468 | WP_010891197.1 | hypothetical protein | VF |
| Y11_RS20720 () | 4466..6655 | + | 2190 | WP_014609444.1 | Protein kinase YpkA | VF |
| Y11_RS20725 () | 7401..8267 | + | 867 | WP_010891200.1 | Effector protein YopJ | VF |
| Y11_RS20730 () | 8791..9528 | - | 738 | WP_013749499.1 | complement resistance protein TraT | - |
| Y11_RS23105 () | 9565..9851 | - | 287 | Protein_7 | IS3 family transposase | - |
| Y11_RS20740 () | 10010..10558 | - | 549 | WP_014609447.1 | hypothetical protein | VF |
| Y11_RS20745 () | 11079..12047 | + | 969 | WP_010891203.1 | Cysteine protease YopT | VF |
| Y11_RS20750 () | 12047..12439 | + | 393 | WP_010891204.1 | Chaperone protein SycT | VF |
| Y11_RS23565 () | 12845..13002 | + | 158 | Protein_11 | DDE-type integrase/transposase/recombinase | - |
| Y11_RS20765 () | 13074..14162 | + | 1089 | Protein_12 | IS3 family transposase | - |
| Y11_RS20770 () | 14297..14647 | + | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| Y11_RS20775 () | 14820..15653 | + | 834 | Protein_14 | Tn3 family transposase TnpA_Tn3 | Transposase |
| Y11_RS22575 () | 15749..16310 | - | 562 | Protein_15 | transposase family protein | - |
| Y11_RS20790 () | 16908..18320 | + | 1413 | WP_014609457.1 | Adhesin YadA | VF |
| Y11_RS20795 () | 18390..19265 | + | 876 | WP_013749484.1 | DMT family transporter | - |
| Y11_RS20800 () | 19587..20039 | - | 453 | WP_010891241.1 | PprA | - |
| Y11_RS20805 () | 20195..21046 | - | 852 | WP_010891242.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| Y11_RS20810 () | 21207..21788 | + | 582 | WP_010891243.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| Y11_RS20815 () | 21802..22227 | - | 426 | WP_014609460.1 | glutaredoxin-dependent arsenate reductase | - |
| Y11_RS20820 () | 22240..23529 | - | 1290 | WP_014609461.1 | arsenite efflux transporter membrane subunit ArsB | - |
| Y11_RS20825 () | 23575..23895 | - | 321 | WP_013749489.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| Y11_RS20830 () | 23981..24679 | + | 699 | WP_013749490.1 | arsenic resistance NADPH-dependent reductase ArsH | - |
| Y11_RS20835 () | 24819..25344 | + | 526 | Protein_25 | Multifunctional conjugation protein TraI | Relaxase |
| Y11_RS20840 () | 25312..26402 | - | 1091 | Protein_26 | IS3 family transposase | - |
| Y11_RS20855 () | 26715..26933 | + | 219 | WP_013749479.1 | hypothetical protein | - |
| Y11_RS20860 () | 26994..27464 | - | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| Y11_RS20865 () | 28080..29246 | + | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| Y11_RS20870 () | 29243..30208 | + | 966 | WP_014609466.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| Y11_RS22585 () | 30633..30925 | + | 293 | Protein_31 | IS6 family transposase ISEas1 | Transposase |
| Y11_RS20875 () | 31091..31333 | + | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| Y11_RS20880 () | 31326..31625 | + | 300 | WP_014609469.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Y11_RS20885 () | 31765..32424 | - | 660 | WP_010891237.1 | Outer membrane virulence protein YopE | VF |
| Y11_RS20890 () | 32617..33009 | + | 393 | WP_010891236.1 | YopE regulator | VF |
| Y11_RS22590 () | 33266..34418 | + | 1153 | Protein_36 | IS3 family transposase | - |
| Y11_RS20905 () | 34622..35047 | + | 426 | WP_010891235.1 | hypothetical protein | VF |
| Y11_RS20910 () | 35275..36681 | - | 1407 | WP_014609473.1 | Tyrosine-protein phosphatase YopH | VF |
| Y11_RS20915 () | 37366..37713 | - | 348 | WP_005176491.1 | Yop proteins translocation protein M | VF |
| Y11_RS20920 () | 37932..38603 | - | 672 | WP_016266435.1 | Yop proteins translocation protein L | VF |
| Y11_RS20925 () | 38549..39178 | - | 630 | WP_010891232.1 | Yop proteins translocation protein K | VF |
| Y11_RS20930 () | 39178..39912 | - | 735 | WP_005176483.1 | Yop proteins translocation lipoprotein J | VF |
| Y11_RS20935 () | 39919..40266 | - | 348 | WP_005176480.1 | Yop proteins translocation protein I | VF |
| Y11_RS20940 () | 40267..40764 | - | 498 | WP_014609475.1 | Yop proteins translocation protein H | VF |
| Y11_RS20945 () | 40761..41108 | - | 348 | WP_014609476.1 | Putative Yop proteins translocation protein G | VF |
| Y11_RS20950 () | 41110..41373 | - | 264 | WP_014609477.1 | Yop proteins translocation protein F | VF |
| Y11_RS20955 () | 41370..41573 | - | 204 | WP_005176461.1 | Putative Yop proteins translocation protein E | VF |
| Y11_RS20960 () | 41570..42826 | - | 1257 | WP_010891226.1 | Yop proteins translocation protein D | VF |
| Y11_RS20965 () | 42823..44646 | - | 1824 | WP_010891225.1 | Yop proteins translocation protein C | VF |
| Y11_RS20970 () | 44652..45065 | - | 414 | WP_010891224.1 | Chaperone protein YscB | VF |
| Y11_RS20975 () | 45291..45389 | - | 99 | WP_010891223.1 | type III secretion system protein YscA | - |
| Y11_RS20980 () | 45468..46283 | - | 816 | WP_013749464.1 | Virulence regulon transcriptional activator VirF | VF |
| Y11_RS20985 () | 46407..46802 | - | 396 | WP_005176443.1 | Exoenzyme S synthesis protein B | VF |
| Y11_RS20990 () | 47378..48442 | - | 1065 | WP_010891221.1 | Yop proteins translocation protein U | VF |
| Y11_RS20995 () | 48442..49227 | - | 786 | WP_013749462.1 | Surface presentation of antigens protein SpaR | VF |
| Y11_RS21000 () | 49224..49490 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| Y11_RS21005 () | 49492..50145 | - | 654 | WP_005176829.1 | Surface presentation of antigens protein SpaP | VF |
| Y11_RS21010 () | 50142..51065 | - | 924 | WP_014609480.1 | Yop proteins translocation protein Q | VF |
| Y11_RS21015 () | 51062..52609 | - | 1548 | WP_014609481.1 | hypothetical protein | VF |
| Y11_RS21020 () | 52609..53073 | - | 465 | WP_013749460.1 | Yop proteins translocation protein O | VF |
| Y11_RS21025 () | 53070..54389 | - | 1320 | WP_010891217.1 | putative ATP synthase YscN | VF |
| Y11_RS21030 () | 54587..55468 | + | 882 | WP_014609482.1 | Outer membrane protein YopN | VF |
| Y11_RS21035 () | 55449..55727 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| Y11_RS21040 () | 55714..56085 | + | 372 | WP_010891215.1 | Chaperone protein SycN | VF |
| Y11_RS21045 () | 56082..56450 | + | 369 | WP_010891214.1 | Yop proteins translocation protein X | VF |
| Y11_RS21050 () | 56447..56791 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| Y11_RS21055 () | 56778..58892 | + | 2115 | WP_013749457.1 | Invasion protein InvA | VF |
| Y11_RS21060 () | 58889..59329 | + | 441 | WP_010891212.1 | hypothetical protein | VF |
| Y11_RS21065 () | 59371..59658 | + | 288 | WP_010891211.1 | hypothetical protein | VF |
| Y11_RS21070 () | 59660..60634 | + | 975 | WP_014609483.1 | Virulence-associated V antigen | VF |
| Y11_RS21075 () | 60637..61143 | + | 507 | WP_016266436.1 | Chaperone protein IpgC | VF |
| Y11_RS21080 () | 61121..62326 | + | 1206 | WP_016266437.1 | Protein YopB | VF |
| Y11_RS21085 () | 62345..63265 | + | 921 | WP_010891207.1 | Protein YopD | VF |
| Y11_RS23115 () | 63490..63996 | + | 507 | Protein_74 | transposase | - |
| Y11_RS21100 () | 64040..65143 | - | 1104 | WP_010891206.1 | Outer membrane protein YopM | VF |
| Y11_RS23295 () | 65918..66204 | + | 287 | Protein_76 | DDE-type integrase/transposase/recombinase | - |
| Y11_RS21120 () | 66818..67907 | - | 1090 | Protein_77 | IS3 family transposase | - |
| Y11_RS23120 () | 67976..68113 | - | 138 | Protein_78 | transposase | - |
| Y11_RS21135 () | 68131..68454 | + | 324 | Protein_79 | DUF2726 domain-containing protein | - |
| Y11_RS21140 () | 68540..68806 | + | 267 | WP_014609492.1 | conjugal transfer protein TraX | - |
| Y11_RS23125 () | 68861..70030 | + | 1170 | Protein_81 | IS3 family transposase | - |
| Y11_RS21150 () | 70216..70761 | + | 546 | WP_016266442.1 | Phospholipase D | VF |
| Y11_RS21155 () | 70899..71153 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| Y11_RS22325 () | 71395..71469 | + | 75 | WP_071598612.1 | RepA leader peptide Tap | - |
| Y11_RS21160 () | 71450..72328 | + | 879 | WP_162470554.1 | incFII family plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|