MGE detailed information
MGE type: Prophage MGE length: 48833 bp
Accession: NC_017564 Location: 1300529..1349361 Organism: Yersinia enterocolitica subsp. palearctica Y11 Replicon: chromosome
Accession: NC_017564 Location: 1300529..1349361 Organism: Yersinia enterocolitica subsp. palearctica Y11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y11_RS05925 () | 1296313..1296732 | + | 420 | WP_005161396.1 | helix-turn-helix domain-containing protein | - |
| Y11_RS05930 () | 1297338..1298255 | - | 918 | WP_005161398.1 | LysR family transcriptional regulator | - |
| Y11_RS05935 () | 1298358..1299566 | + | 1209 | WP_005161400.1 | MFS transporter | - |
| Y11_RS21590 () | 1299565..1299664 | + | 100 | Protein_1168 | integrase | - |
| Y11_RS22775 () | 1299851..1300514 | + | 664 | Protein_1169 | transposase | - |
| Y11_RS21595 () | 1300493..1300795 | + | 303 | WP_071598556.1 | P2 family phage major capsid protein | - |
| Y11_RS05950 () | 1300789..1300968 | + | 180 | WP_005161416.1 | holin | - |
| Y11_RS05955 () | 1300955..1301350 | + | 396 | WP_005161419.1 | M15 family metallopeptidase | - |
| Y11_RS05960 () | 1301354..1301779 | + | 426 | WP_005161423.1 | Rz-like lysis system protein LysB | - |
| Y11_RS05965 () | 1301881..1302348 | + | 468 | WP_005161429.1 | phage tail protein | - |
| Y11_RS05970 () | 1302345..1302791 | + | 447 | WP_005161432.1 | phage virion morphogenesis protein | - |
| Y11_RS05975 () | 1302830..1303891 | - | 1062 | WP_005161434.1 | toll/interleukin-1 receptor domain-containing protein | - |
| Y11_RS05980 () | 1303957..1304247 | - | 291 | WP_005161435.1 | BrnA antitoxin family protein | - |
| Y11_RS05985 () | 1304228..1304500 | - | 273 | WP_005161438.1 | BrnT family toxin | - |
| Y11_RS05990 () | 1304637..1305272 | + | 636 | WP_005161446.1 | phage baseplate assembly protein V | - |
| Y11_RS05995 () | 1305269..1305625 | + | 357 | WP_005161449.1 | GPW/gp25 family protein | - |
| Y11_RS06000 () | 1305625..1306533 | + | 909 | WP_005178623.1 | baseplate assembly protein | - |
| Y11_RS06005 () | 1306526..1307068 | + | 543 | WP_005161456.1 | phage tail protein I | - |
| Y11_RS06010 () | 1307065..1307346 | + | 282 | WP_005161459.1 | phage tail protein | - |
| Y11_RS06015 () | 1307319..1308611 | + | 1293 | WP_014608992.1 | phage tail protein | - |
| Y11_RS21600 () | 1308611..1309223 | + | 613 | Protein_1185 | tail fiber assembly protein | - |
| Y11_RS06030 () | 1309276..1309554 | - | 279 | WP_005161463.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| Y11_RS06035 () | 1309561..1309821 | - | 261 | WP_005161466.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| Y11_RS23470 () | 1309893..1310060 | - | 168 | WP_005161469.1 | hypothetical protein | - |
| Y11_RS06045 () | 1310202..1310408 | + | 207 | WP_005161471.1 | hypothetical protein | - |
| Y11_RS06050 () | 1310398..1310718 | + | 321 | WP_005161473.1 | hypothetical protein | - |
| Y11_RS23475 () | 1311160..1311336 | + | 177 | WP_005161476.1 | Putative L,D-transpeptidase YkuD | VF |
| Y11_RS06055 () | 1311542..1312426 | + | 885 | WP_072077259.1 | Colicin I receptor | VF |
| Y11_RS23480 () | 1312718..1312856 | + | 139 | Protein_1193 | ash family protein | - |
| Y11_RS06065 () | 1313089..1313814 | - | 726 | WP_014608996.1 | IS21 family transposase ISYen2A | Transposase |
| Y11_RS06070 () | 1313801..1314556 | - | 756 | Protein_1195 | IS21 family transposase ISYen2B | Transposase |
| Y11_RS06075 () | 1314606..1315808 | + | 1203 | WP_005179233.1 | IS256 family transposase ISSod4 | Transposase |
| Y11_RS06080 () | 1315848..1316609 | - | 762 | Protein_1197 | IS21 family transposase ISYen2A | Transposase |
| Y11_RS06085 () | 1316590..1317597 | + | 1008 | WP_023161047.1 | Fe(3+) ions import ATP-binding protein FbpC 2 ; Integrase | Integrase |
| Y11_RS06090 () | 1317901..1318887 | - | 987 | WP_014609000.1 | DUF4917 family protein | - |
| Y11_RS06095 () | 1318902..1319927 | - | 1026 | WP_014609001.1 | Molybdate-binding protein ModA ; Integrase | Integrase |
| Y11_RS06100 () | 1320226..1321110 | - | 885 | WP_014609003.1 | BRCT domain-containing protein | - |
| Y11_RS06105 () | 1321151..1321762 | - | 612 | WP_016266213.1 | phage repressor protein CI | - |
| Y11_RS06110 () | 1321833..1322030 | + | 198 | WP_014609005.1 | hypothetical protein | - |
| Y11_RS06115 () | 1322085..1322594 | + | 510 | WP_014609006.1 | phage regulatory CII family protein | - |
| Y11_RS06120 () | 1322604..1322789 | + | 186 | WP_014609007.1 | DUF2724 domain-containing protein | - |
| Y11_RS06125 () | 1322801..1323112 | + | 312 | WP_014609008.1 | hypothetical protein | - |
| Y11_RS06130 () | 1323178..1323450 | + | 273 | WP_014609009.1 | DUF2732 family protein | - |
| Y11_RS06135 () | 1323437..1325719 | + | 2283 | WP_014609010.1 | replication endonuclease | - |
| Y11_RS06140 () | 1325742..1326101 | + | 360 | WP_005163732.1 | hypothetical protein | - |
| Y11_RS06145 () | 1326309..1326491 | + | 183 | WP_005163733.1 | hypothetical protein | - |
| Y11_RS06150 () | 1326856..1327134 | - | 279 | WP_014609011.1 | hypothetical protein | - |
| Y11_RS06155 () | 1327247..1328285 | - | 1039 | Protein_1212 | phage portal protein | - |
| Y11_RS06160 () | 1328282..1329046 | - | 765 | WP_014609013.1 | terminase family protein | - |
| Y11_RS06165 () | 1329043..1330815 | - | 1773 | WP_014609014.1 | terminase ATPase subunit family protein | - |
| Y11_RS06170 () | 1330969..1331823 | + | 855 | WP_014609015.1 | GPO family capsid scaffolding protein | - |
| Y11_RS06175 () | 1331900..1333051 | + | 1152 | WP_014609016.1 | phage major capsid protein, P2 family | - |
| Y11_RS06180 () | 1333055..1333714 | + | 660 | WP_014609017.1 | terminase endonuclease subunit | - |
| Y11_RS06185 () | 1333814..1334287 | + | 474 | WP_014609018.1 | head completion/stabilization protein | - |
| Y11_RS06190 () | 1334287..1334490 | + | 204 | WP_041161505.1 | tail protein X | - |
| Y11_RS06195 () | 1334493..1334702 | + | 210 | WP_005163750.1 | hypothetical protein | - |
| Y11_RS06200 () | 1334686..1335192 | + | 507 | WP_014609020.1 | lysozyme | - |
| Y11_RS06205 () | 1335194..1335610 | + | 417 | WP_041161506.1 | Rz-like lysis system protein LysB | - |
| Y11_RS06210 () | 1335706..1336161 | + | 456 | WP_014609022.1 | phage tail protein | - |
| Y11_RS06215 () | 1336158..1336607 | + | 450 | WP_014609023.1 | phage virion morphogenesis protein | - |
| Y11_RS23325 () | 1336957..1337121 | + | 165 | WP_014609024.1 | hypothetical protein | - |
| Y11_RS06220 () | 1337153..1337470 | + | 318 | WP_004705545.1 | helix-turn-helix domain-containing protein | - |
| Y11_RS06225 () | 1337640..1338377 | + | 738 | WP_197535557.1 | reverse transcriptase family protein | - |
| Y11_RS06230 () | 1338478..1339119 | + | 642 | WP_014609026.1 | phage baseplate assembly protein V | - |
| Y11_RS06235 () | 1339116..1339466 | + | 351 | WP_014609027.1 | GPW/gp25 family protein | - |
| Y11_RS06240 () | 1339471..1340379 | + | 909 | WP_005163763.1 | baseplate assembly protein | - |
| Y11_RS06245 () | 1340372..1340980 | + | 609 | WP_014609028.1 | phage tail protein I | - |
| Y11_RS06250 () | 1340977..1342416 | + | 1440 | WP_014609029.1 | phage tail protein | - |
| Y11_RS06255 () | 1342427..1342609 | + | 183 | WP_014609030.1 | hypothetical protein | - |
| Y11_RS06260 () | 1342764..1343933 | + | 1170 | WP_014609031.1 | phage tail sheath protein | - |
| Y11_RS06265 () | 1343947..1344462 | + | 516 | WP_005163776.1 | phage major tail tube protein | - |
| Y11_RS06270 () | 1344515..1344826 | + | 312 | WP_014609032.1 | phage tail assembly protein | - |
| Y11_RS06275 () | 1344859..1344981 | + | 123 | WP_014609033.1 | GpE family phage tail protein | - |
| Y11_RS06280 () | 1344974..1347403 | + | 2430 | WP_014609034.1 | phage tail tape measure protein | - |
| Y11_RS06285 () | 1347406..1347891 | + | 486 | WP_014609035.1 | phage tail protein | - |
| Y11_RS06290 () | 1347888..1349054 | + | 1167 | WP_014609036.1 | phage late control D family protein | - |
| Y11_RS21615 () | 1349146..1349361 | + | 216 | WP_014609037.1 | DNA-binding transcriptional regulator | - |
| Y11_RS06315 () | 1350055..1350603 | - | 549 | WP_005160174.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| Y11_RS06320 () | 1350662..1352494 | - | 1833 | WP_005160178.1 | excinuclease ABC subunit UvrC | - |
| Y11_RS06325 () | 1352487..1353143 | - | 657 | WP_005160181.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| Y11_RS06330 () | 1353837..1354061 | + | 225 | WP_005160184.1 | DUF2594 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|