MGE detailed information
MGE type: Prophage MGE length: 71306 bp
Accession: NC_017538 Location: 3234586..3305891 Organism: Oligotropha carboxidovorans OM4 Replicon: chromosome
Accession: NC_017538 Location: 3234586..3305891 Organism: Oligotropha carboxidovorans OM4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCA4_RS15280 () | 3230225..3230668 | - | 444 | WP_013913366.1 | phasin family protein | - |
| OCA4_RS15285 () | 3230778..3232538 | - | 1761 | WP_012562029.1 | alpha/beta fold hydrolase | - |
| OCA4_RS15290 () | 3232856..3233464 | + | 609 | WP_013913367.1 | TetR family transcriptional regulator | - |
| OCA4_RS15295 () | 3233553..3234584 | + | 1032 | WP_012562027.1 | secretion protein HlyD | - |
| OCA4_RS15300 () | 3234586..3236367 | + | 1782 | WP_012562026.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| OCA4_RS15305 () | 3236364..3237533 | + | 1170 | WP_012562025.1 | ABC transporter permease | - |
| OCA4_RS15310 () | 3237538..3238656 | + | 1119 | WP_012562024.1 | ABC transporter permease | - |
| OCA4_RS15315 () | 3238981..3239430 | + | 450 | WP_012562023.1 | OsmC family protein | - |
| OCA4_RS18700 () | 3239597..3240037 | - | 441 | WP_013913368.1 | hypothetical protein | - |
| OCA4_RS15320 () | 3241034..3241744 | - | 711 | WP_012562020.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| OCA4_RS15325 () | 3241746..3242948 | - | 1203 | WP_012562019.1 | ABC transporter permease | - |
| OCA4_RS15330 () | 3242945..3244105 | - | 1161 | WP_042200887.1 | efflux RND transporter periplasmic adaptor subunit | - |
| OCA4_RS15335 () | 3244257..3244853 | - | 597 | WP_012562016.1 | TetR/AcrR family transcriptional regulator | - |
| OCA4_RS15340 () | 3245159..3245665 | - | 507 | WP_012562015.1 | hypothetical protein | - |
| OCA4_RS15345 () | 3245658..3246392 | - | 735 | WP_012562014.1 | secretion activator protein | - |
| OCA4_RS15350 () | 3246483..3246773 | - | 291 | WP_012562013.1 | hypothetical protein | - |
| OCA4_RS15355 () | 3246791..3247861 | - | 1071 | WP_012562012.1 | DUF2793 domain-containing protein | - |
| OCA4_RS15360 () | 3247890..3251717 | - | 3828 | WP_012562011.1 | glycoside hydrolase TIM-barrel-like domain-containing protein | - |
| OCA4_RS15365 () | 3251721..3252353 | - | 633 | WP_012562010.1 | hypothetical protein | - |
| OCA4_RS15370 () | 3252356..3252871 | - | 516 | WP_013913370.1 | C40 family peptidase | - |
| OCA4_RS15375 () | 3252871..3253710 | - | 840 | WP_012562008.1 | DUF2163 domain-containing protein | - |
| OCA4_RS15380 () | 3253714..3254301 | - | 588 | WP_012562007.1 | DUF2460 domain-containing protein | - |
| OCA4_RS15385 () | 3254298..3257030 | - | 2733 | WP_012562006.1 | phage tail length tape measure family protein | - |
| OCA4_RS19090 () | 3257059..3257211 | - | 153 | WP_162096602.1 | hypothetical protein | - |
| OCA4_RS15390 () | 3257369..3257713 | - | 345 | Protein_3058 | hypothetical protein | - |
| OCA4_RS15395 () | 3257807..3258082 | + | 276 | WP_013913371.1 | BrnT family toxin | - |
| OCA4_RS15400 () | 3258058..3258411 | + | 354 | WP_012562002.1 | helix-turn-helix domain-containing protein | - |
| OCA4_RS15405 () | 3258412..3259353 | - | 942 | WP_012562001.1 | hypothetical protein | - |
| OCA4_RS15410 () | 3259384..3259815 | - | 432 | WP_012562000.1 | hypothetical protein | - |
| OCA4_RS15415 () | 3259898..3260554 | - | 657 | WP_012561999.1 | hypothetical protein | - |
| OCA4_RS15420 () | 3260559..3260879 | - | 321 | WP_013913372.1 | hypothetical protein | - |
| OCA4_RS15425 () | 3260886..3261908 | - | 1023 | WP_012561997.1 | major capsid protein | - |
| OCA4_RS15430 () | 3261989..3262378 | - | 390 | WP_012561996.1 | head decoration protein | - |
| OCA4_RS15435 () | 3262407..3263711 | - | 1305 | WP_013913373.1 | S49 family peptidase | - |
| OCA4_RS15440 () | 3263704..3265179 | - | 1476 | WP_012561994.1 | phage portal protein | - |
| OCA4_RS15445 () | 3265180..3265392 | - | 213 | WP_012561993.1 | hypothetical protein | - |
| OCA4_RS15450 () | 3265396..3267369 | - | 1974 | WP_012561992.1 | phage terminase large subunit family protein | - |
| OCA4_RS15455 () | 3267362..3267946 | - | 585 | WP_013913374.1 | hypothetical protein | - |
| OCA4_RS15460 () | 3268135..3268353 | + | 219 | WP_012561990.1 | hypothetical protein | - |
| OCA4_RS15465 () | 3268458..3269177 | + | 720 | WP_013913375.1 | DUF3489 domain-containing protein | - |
| OCA4_RS15470 () | 3269303..3269533 | + | 231 | WP_012561988.1 | hexameric tyrosine-coordinated heme protein | - |
| OCA4_RS18710 () | 3269551..3270627 | - | 1077 | WP_012561987.1 | DNA cytosine methyltransferase | - |
| OCA4_RS15490 () | 3270629..3271996 | - | 1368 | WP_012561986.1 | site-specific DNA-methyltransferase | - |
| OCA4_RS15495 () | 3272345..3272626 | + | 282 | WP_012561984.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OCA4_RS15500 () | 3272635..3272991 | + | 357 | WP_012561983.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| OCA4_RS15505 () | 3273389..3273940 | - | 552 | WP_012561981.1 | hypothetical protein | - |
| OCA4_RS15510 () | 3273937..3274152 | - | 216 | WP_012561980.1 | hypothetical protein | - |
| OCA4_RS15515 () | 3274149..3274466 | - | 318 | WP_013913377.1 | hypothetical protein | - |
| OCA4_RS15520 () | 3274463..3274999 | - | 537 | WP_012561978.1 | hypothetical protein | - |
| OCA4_RS15525 () | 3275332..3275580 | - | 249 | WP_012561977.1 | hypothetical protein | - |
| OCA4_RS15530 () | 3275616..3275879 | - | 264 | WP_013913378.1 | SHOCT domain-containing protein | - |
| OCA4_RS15535 () | 3275900..3276283 | - | 384 | WP_012561975.1 | DUF302 domain-containing protein | - |
| OCA4_RS15540 () | 3276360..3278906 | - | 2547 | WP_012561974.1 | toprim domain-containing protein | - |
| OCA4_RS15545 () | 3278918..3279790 | - | 873 | WP_012561973.1 | hypothetical protein | - |
| OCA4_RS15550 () | 3279799..3280143 | - | 345 | WP_013913379.1 | hypothetical protein | - |
| OCA4_RS15555 () | 3280140..3280373 | - | 234 | WP_012561971.1 | hypothetical protein | - |
| OCA4_RS15560 () | 3280386..3281108 | - | 723 | WP_012561970.1 | hypothetical protein | - |
| OCA4_RS15565 () | 3281144..3281989 | - | 846 | WP_012561969.1 | ATP-binding protein | - |
| OCA4_RS15570 () | 3282120..3282611 | - | 492 | WP_012561968.1 | hypothetical protein | - |
| OCA4_RS15575 () | 3282623..3283033 | - | 411 | WP_012561967.1 | hypothetical protein | - |
| OCA4_RS15580 () | 3283200..3283820 | - | 621 | WP_012561966.1 | sigma-70 family RNA polymerase sigma factor | - |
| OCA4_RS15585 () | 3283919..3284200 | - | 282 | WP_012561965.1 | helix-turn-helix transcriptional regulator | - |
| OCA4_RS15590 () | 3284221..3284961 | - | 741 | WP_012561964.1 | ImmA/IrrE family metallo-endopeptidase | - |
| OCA4_RS15595 () | 3285334..3285492 | - | 159 | WP_148261454.1 | CBS domain-containing protein | - |
| OCA4_RS15600 () | 3285680..3286279 | + | 600 | WP_012561962.1 | hypothetical protein | - |
| OCA4_RS15605 () | 3286383..3286868 | + | 486 | WP_012561961.1 | hypothetical protein | - |
| OCA4_RS15610 () | 3287026..3287652 | + | 627 | WP_013913380.1 | DUF3592 domain-containing protein | - |
| OCA4_RS15615 () | 3287699..3288067 | + | 369 | WP_012561958.1 | hypothetical protein | - |
| OCA4_RS15625 () | 3288535..3288981 | + | 447 | WP_012561957.1 | DUF2924 domain-containing protein | - |
| OCA4_RS15630 () | 3288978..3290285 | + | 1308 | WP_012561956.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| OCA4_RS15635 () | 3290285..3290674 | + | 390 | WP_012561955.1 | hypothetical protein | - |
| OCA4_RS15645 () | 3291225..3291644 | - | 420 | WP_012561954.1 | DUF3775 domain-containing protein | - |
| OCA4_RS15650 () | 3291779..3292336 | - | 558 | WP_012561953.1 | hypothetical protein | - |
| OCA4_RS15680 () | 3298633..3300717 | + | 2085 | WP_013913383.1 | M23 family metallopeptidase | - |
| OCA4_RS15685 () | 3300777..3303410 | - | 2634 | WP_012561950.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| OCA4_RS15690 () | 3303623..3304402 | + | 780 | WP_013913384.1 | MOSC domain-containing protein | - |
| OCA4_RS15695 () | 3304404..3305048 | - | 645 | WP_012561948.1 | TIGR02594 family protein | - |
| OCA4_RS15700 () | 3305238..3305891 | - | 654 | WP_012561947.1 | methionine biosynthesis protein MetW | - |
| OCA4_RS15705 () | 3305893..3307101 | - | 1209 | WP_013913385.1 | homoserine O-acetyltransferase | - |
| OCA4_RS15710 () | 3307389..3308237 | + | 849 | WP_012561944.1 | chorismate mutase | - |
| OCA4_RS15715 () | 3308258..3309352 | + | 1095 | WP_013913386.1 | histidinol-phosphate transaminase | - |
| OCA4_RS15720 () | 3309349..3310311 | + | 963 | WP_012561942.1 | prephenate/arogenate dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|