MGE detailed information
MGE type: Prophage MGE length: 26071 bp
Accession: NC_017522 Location: 3533178..3559248 Organism: Mycobacterium tuberculosis CCDC5180 Replicon: chromosome
Accession: NC_017522 Location: 3533178..3559248 Organism: Mycobacterium tuberculosis CCDC5180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCDC5180_RS22920 () | 3528719..3528898 | - | 180 | WP_003917749.1 | hypothetical protein | - |
| CCDC5180_RS16765 () | 3529174..3529776 | - | 603 | WP_003416617.1 | TetR/AcrR family transcriptional regulator; helix-turn-helix transcriptional regulator | - |
| CCDC5180_RS16770 () | 3529869..3530576 | + | 708 | WP_003906024.1 | SDR family oxidoreductase | - |
| CCDC5180_RS16775 () | 3530591..3532078 | + | 1488 | WP_003416624.1 | amidase | - |
| CCDC5180_RS16780 () | 3532075..3533031 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CCDC5180_RS16785 () | 3533178..3534038 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CCDC5180_RS16790 () | 3534013..3534528 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CCDC5180_RS16795 () | 3534768..3535061 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CCDC5180_RS16805 () | 3535127..3536388 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CCDC5180_RS16810 () | 3536707..3537996 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CCDC5180_RS16825 () | 3539700..3540134 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CCDC5180_RS16830 () | 3540137..3540589 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CCDC5180_RS16835 () | 3540820..3541164 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCDC5180_RS16840 () | 3541161..3541490 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CCDC5180_RS16845 () | 3542028..3542375 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CCDC5180_RS16850 () | 3542372..3542992 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CCDC5180_RS16855 () | 3543152..3544417 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| CCDC5180_RS16860 () | 3544586..3544795 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CCDC5180_RS16870 () | 3545042..3546076 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CCDC5180_RS16875 () | 3546360..3546584 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CCDC5180_RS16885 () | 3547291..3547755 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| CCDC5180_RS16890 () | 3547853..3550831 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CCDC5180_RS16895 () | 3550923..3551945 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CCDC5180_RS16900 () | 3552023..3553441 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CCDC5180_RS16905 () | 3553480..3554346 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CCDC5180_RS16910 () | 3554355..3554528 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CCDC5180_RS16915 () | 3554683..3556026 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CCDC5180_RS16920 () | 3556060..3556338 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CCDC5180_RS16925 () | 3556768..3558870 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CCDC5180_RS16930 () | 3558994..3559248 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CCDC5180_RS16935 () | 3559261..3560202 | - | 942 | WP_003906027.1 | NAD(+) diphosphatase | - |
| CCDC5180_RS16940 () | 3560261..3561328 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|