MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103581 bp
Accession: NC_017491 Location: 2494796..2598376 Organism: Lactobacillus rhamnosus ATCC 8530 Replicon: chromosome
Accession: NC_017491 Location: 2494796..2598376 Organism: Lactobacillus rhamnosus ATCC 8530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRHK_RS11485 (LRHK_2552) | 2491279..2491875 | + | 597 | WP_005691229.1 | NAD(P)H-dependent oxidoreductase | - |
| LRHK_RS11490 (LRHK_2553) | 2492044..2492709 | + | 666 | WP_014571604.1 | CBS domain-containing protein | - |
| LRHK_RS11495 (LRHK_2554) | 2493006..2493704 | + | 699 | WP_014571605.1 | L,D-transpeptidase | - |
| LRHK_RS11500 (LRHK_2555) | 2493784..2495220 | - | 1437 | WP_005691225.1 | glutamate synthase subunit beta | - |
| LRHK_RS11505 (LRHK_2556) | 2495285..2499751 | - | 4467 | WP_005691223.1 | glutamate synthase large subunit | - |
| LRHK_RS11510 (LRHK_2557) | 2500047..2500574 | - | 528 | WP_005691221.1 | QueT transporter family protein | - |
| LRHK_RS11520 (LRHK_2558) | 2501088..2501471 | - | 384 | WP_005686631.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LRHK_RS11525 (LRHK_2560) | 2501491..2501739 | - | 249 | WP_005686632.1 | antitoxin | Antitoxin Detail |
| LRHK_RS11530 (LRHK_2561) | 2501851..2502990 | - | 1140 | WP_005691215.1 | alanine racemase | - |
| LRHK_RS11535 (LRHK_2562) | 2502977..2503351 | - | 375 | WP_005686634.1 | holo-ACP synthase | - |
| LRHK_RS11540 (LRHK_2563) | 2503520..2505028 | - | 1509 | WP_005686635.1 | DEAD/DEAH box helicase | - |
| LRHK_RS11545 (LRHK_2564) | 2505302..2506690 | - | 1389 | WP_014571607.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| LRHK_RS11550 (LRHK_2565) | 2506837..2507601 | - | 765 | WP_005691211.1 | hypothetical protein | - |
| LRHK_RS11555 (LRHK_2566) | 2507803..2508444 | + | 642 | WP_005691209.1 | SMI1/KNR4 family protein | - |
| LRHK_RS11560 (LRHK_2567) | 2508460..2509134 | - | 675 | WP_014571608.1 | hypothetical protein | - |
| LRHK_RS11565 (LRHK_2568) | 2509390..2509818 | + | 429 | WP_005691206.1 | hypothetical protein | - |
| LRHK_RS11570 (LRHK_2569) | 2510581..2514390 | + | 3810 | WP_191979107.1 | hypothetical protein | VF |
| LRHK_RS11575 | 2514392..2514634 | + | 243 | WP_032953850.1 | hypothetical protein | - |
| LRHK_RS11580 (LRHK_2571) | 2514677..2515000 | + | 324 | WP_003606404.1 | DUF961 family protein | - |
| LRHK_RS11585 (LRHK_2572) | 2515018..2515389 | + | 372 | WP_005691200.1 | YdcP family protein | - |
| LRHK_RS11590 (LRHK_2573) | 2515464..2515694 | + | 231 | WP_005691198.1 | hypothetical protein | - |
| LRHK_RS11595 (LRHK_2574) | 2515870..2516976 | + | 1107 | WP_005691196.1 | ATP-binding protein | - |
| LRHK_RS11600 (LRHK_2575) | 2516966..2519299 | + | 2334 | WP_014571610.1 | S8 family peptidase | - |
| LRHK_RS11605 (LRHK_2577) | 2519699..2519986 | + | 288 | WP_005691190.1 | hypothetical protein | - |
| LRHK_RS11610 (LRHK_2578) | 2519983..2521371 | + | 1389 | WP_005691187.1 | DNA translocase FtsK | - |
| LRHK_RS11615 (LRHK_2579) | 2521361..2521636 | + | 276 | WP_005691185.1 | hypothetical protein | - |
| LRHK_RS11620 (LRHK_2581) | 2521633..2521893 | + | 261 | WP_005691183.1 | hypothetical protein | - |
| LRHK_RS11625 (LRHK_2580) | 2521862..2524432 | - | 2571 | WP_005691179.1 | AAA family ATPase | - |
| LRHK_RS11630 (LRHK_2582) | 2524807..2525997 | + | 1191 | WP_014571613.1 | XRE family transcriptional regulator | - |
| LRHK_RS11635 | 2525987..2526313 | + | 327 | WP_005691174.1 | hypothetical protein | - |
| LRHK_RS11640 (LRHK_2584) | 2526444..2527178 | + | 735 | WP_005691172.1 | site-specific DNA-methyltransferase | - |
| LRHK_RS11645 (LRHK_2585) | 2527277..2527498 | + | 222 | WP_014571615.1 | hypothetical protein | - |
| LRHK_RS11650 (LRHK_2586) | 2527502..2527999 | + | 498 | WP_005691169.1 | antirestriction protein ArdA | - |
| LRHK_RS11655 (LRHK_2587) | 2528061..2528453 | + | 393 | WP_005691167.1 | conjugal transfer protein | - |
| LRHK_RS11660 (LRHK_2588) | 2528437..2530902 | + | 2466 | WP_005691164.1 | ATP-binding protein | - |
| LRHK_RS11665 (LRHK_2589) | 2530889..2532982 | + | 2094 | WP_005691162.1 | hypothetical protein | - |
| LRHK_RS11670 (LRHK_2590) | 2532979..2533974 | + | 996 | WP_005691161.1 | hypothetical protein | VF |
| LRHK_RS11675 (LRHK_2591) | 2533984..2534517 | + | 534 | WP_014571616.1 | hypothetical protein | - |
| LRHK_RS11680 (LRHK_2592) | 2534514..2535437 | + | 924 | WP_005691157.1 | conjugal transfer protein | - |
| LRHK_RS11685 (LRHK_2593) | 2535609..2536607 | - | 999 | WP_005691155.1 | IS30 family transposase ISApl1 | Transposase |
| LRHK_RS11690 | 2536677..2537054 | - | 378 | Protein_2271 | minor capsid protein | - |
| LRHK_RS14750 | 2537152..2537938 | + | 787 | WP_148261408.1 | IS5 family transposase ISCaa8 | Transposase |
| LRHK_RS11700 (LRHK_2597) | 2538350..2539969 | + | 1620 | WP_005691148.1 | peptide ABC transporter substrate-binding protein | - |
| LRHK_RS11705 (LRHK_2599) | 2539998..2541083 | + | 1086 | WP_012491759.1 | M42 family peptidase | - |
| LRHK_RS11710 (LRHK_2601) | 2541083..2541939 | + | 857 | Protein_2275 | M55 family metallopeptidase | - |
| LRHK_RS11715 (LRHK_2602) | 2541943..2542839 | + | 897 | WP_005691142.1 | proline iminopeptidase-family hydrolase | - |
| LRHK_RS11720 (LRHK_2603) | 2542878..2543555 | + | 678 | WP_014571618.1 | DUF969 domain-containing protein | - |
| LRHK_RS11725 (LRHK_2604) | 2543558..2544472 | + | 915 | WP_003577393.1 | DUF979 domain-containing protein | - |
| LRHK_RS11730 (LRHK_2605) | 2544488..2545135 | + | 648 | WP_003573111.1 | pyroglutamyl-peptidase I | - |
| LRHK_RS11735 (LRHK_2606) | 2545458..2546378 | - | 921 | WP_148261409.1 | IS30 family transposase ISLpl1 | Transposase |
| LRHK_RS11740 (LRHK_2607) | 2546597..2547370 | - | 774 | WP_014571620.1 | sulfite exporter TauE/SafE family protein | - |
| LRHK_RS11745 (LRHK_2608) | 2547543..2547788 | + | 246 | WP_005691133.1 | DUF1211 domain-containing protein | - |
| LRHK_RS14755 | 2547752..2548254 | - | 503 | Protein_2283 | IS3 family transposase ISL1 | Transposase |
| LRHK_RS11755 (LRHK_2610) | 2548452..2548841 | + | 390 | WP_005691129.1 | HTH domain-containing protein | - |
| LRHK_RS11760 (LRHK_2611) | 2548969..2550144 | + | 1176 | WP_014571621.1 | IS256 family transposase IS1310 | Transposase |
| LRHK_RS11765 (LRHK_2612) | 2550360..2550869 | - | 510 | WP_014571622.1 | Serine acetyltransferase | VF |
| LRHK_RS11770 (LRHK_2613) | 2550835..2552019 | - | 1185 | WP_014571623.1 | PLP-dependent aspartate aminotransferase family protein | - |
| LRHK_RS11775 (LRHK_2614) | 2552061..2552972 | - | 912 | WP_014571624.1 | cysteine synthase family protein | - |
| LRHK_RS11780 (LRHK_2615) | 2553436..2554365 | + | 930 | WP_014571625.1 | IS30 family transposase ISLpl1 | Transposase |
| LRHK_RS11785 (LRHK_2616) | 2554500..2555186 | + | 687 | WP_005691121.1 | IS6 family transposase ISSau6 | Transposase |
| LRHK_RS11790 (LRHK_2617) | 2555861..2557765 | + | 1905 | WP_014571626.1 | heavy metal translocating P-type ATPase | - |
| LRHK_RS11795 (LRHK_2619) | 2557915..2558513 | - | 599 | Protein_2292 | aquaporin family protein | - |
| LRHK_RS11800 (LRHK_2620) | 2559024..2559362 | - | 339 | WP_014571627.1 | PbsX family transcriptional regulator | - |
| LRHK_RS11805 (LRHK_2621) | 2559575..2559895 | + | 321 | WP_005691113.1 | thioredoxin family protein | - |
| LRHK_RS11810 (LRHK_2622) | 2559913..2560182 | + | 270 | WP_005691112.1 | metal-sensitive transcriptional regulator | - |
| LRHK_RS11815 (LRHK_2623) | 2560395..2560598 | - | 204 | WP_005691111.1 | hypothetical protein | - |
| LRHK_RS11820 (LRHK_2624) | 2560725..2561276 | - | 552 | WP_005691109.1 | DNA starvation/stationary phase protection protein | - |
| LRHK_RS11825 (LRHK_2625) | 2561289..2561507 | - | 219 | WP_014571628.1 | heavy-metal-associated domain-containing protein | - |
| LRHK_RS11830 (LRHK_2626) | 2561625..2562545 | - | 921 | WP_014571629.1 | IS30 family transposase ISLpl1 | Transposase |
| LRHK_RS11835 (LRHK_2627) | 2563290..2564879 | + | 1590 | WP_005691106.1 | asparagine synthase B | - |
| LRHK_RS11840 (LRHK_2628) | 2565121..2565795 | + | 675 | WP_014571630.1 | IS6 family transposase ISBth20 | Transposase |
| LRHK_RS14765 | 2565833..2566075 | + | 243 | WP_080565019.1 | cytosolic protein | - |
| LRHK_RS11845 (LRHK_2630) | 2566384..2567055 | - | 672 | WP_005691104.1 | TetR/AcrR family transcriptional regulator | - |
| LRHK_RS11850 (LRHK_2631) | 2567060..2568277 | - | 1218 | WP_032953846.1 | ABC transporter permease | - |
| LRHK_RS11855 (LRHK_2632) | 2568255..2568998 | - | 744 | WP_005691100.1 | Linearmycin resistance ATP-binding protein LnrL | VF |
| LRHK_RS11860 (LRHK_2633) | 2569218..2569601 | - | 384 | Protein_2306 | pyridoxal-phosphate dependent enzyme | - |
| LRHK_RS11875 (LRHK_2635) | 2570618..2571226 | + | 609 | WP_005691088.1 | NAD(P)H-dependent oxidoreductase | - |
| LRHK_RS11880 (LRHK_2636) | 2571237..2572505 | + | 1269 | WP_005691086.1 | PAS domain-containing protein | - |
| LRHK_RS11885 (LRHK_2637) | 2572632..2572838 | - | 207 | Protein_2310 | transposase | - |
| LRHK_RS15510 | 2572828..2572899 | - | 72 | Protein_2311 | IS6 family transposase | - |
| LRHK_RS14780 | 2572898..2573685 | + | 788 | WP_148261410.1 | IS5 family transposase ISCaa8 | Transposase |
| LRHK_RS14785 | 2574076..2574497 | + | 422 | Protein_2313 | IS30 family transposase | - |
| LRHK_RS11900 (LRHK_2639) | 2574459..2575232 | - | 774 | WP_005691081.1 | hypothetical protein | - |
| LRHK_RS11905 | 2575242..2576395 | - | 1154 | Protein_2315 | 50S ribosome-binding GTPase | - |
| LRHK_RS11910 (LRHK_2642) | 2576385..2576651 | - | 267 | WP_005691077.1 | hypothetical protein | - |
| LRHK_RS11915 (LRHK_2644) | 2576879..2577112 | - | 234 | WP_005691075.1 | DUF1524 domain-containing protein | - |
| LRHK_RS14790 | 2577090..2577323 | + | 234 | Protein_2318 | transposase | - |
| LRHK_RS11920 (LRHK_2646) | 2577506..2577859 | + | 354 | Protein_2319 | IS5 family transposase ISLca2 | Transposase |
| LRHK_RS15275 | 2577868..2578374 | + | 507 | Protein_2320 | IS6 family transposase ISBth20 | Transposase |
| LRHK_RS11925 (LRHK_2647) | 2578450..2579133 | + | 684 | WP_014571637.1 | IS6 family transposase ISBth20 | Transposase |
| LRHK_RS11930 (LRHK_2648) | 2579461..2579859 | + | 399 | WP_005691070.1 | sigma-70 family RNA polymerase sigma factor | - |
| LRHK_RS11935 | 2579880..2580137 | + | 258 | WP_019899265.1 | helix-turn-helix domain-containing protein | - |
| LRHK_RS11940 (LRHK_2651) | 2580487..2580759 | + | 273 | WP_010490992.1 | helix-turn-helix domain-containing protein | - |
| LRHK_RS11945 (LRHK_2652) | 2580811..2582073 | + | 1263 | WP_005691064.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LRHK_RS11950 (LRHK_2653) | 2582204..2582455 | - | 252 | WP_005691061.1 | type B 50S ribosomal protein L31 | - |
| LRHK_RS11955 (LRHK_2654) | 2582552..2583811 | - | 1260 | WP_005686643.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| LRHK_RS14795 | 2583889..2584122 | - | 234 | WP_015764735.1 | hypothetical protein | - |
| LRHK_RS15280 | 2584177..2584365 | - | 189 | WP_015764736.1 | hypothetical protein | - |
| LRHK_RS11965 (LRHK_2657) | 2584752..2586356 | - | 1605 | WP_014571642.1 | CTP synthase | - |
| LRHK_RS11970 (LRHK_2658) | 2586787..2587974 | + | 1188 | WP_005691059.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LRHK_RS11975 (LRHK_2659) | 2588075..2588419 | - | 345 | WP_005691058.1 | hypothetical protein | - |
| LRHK_RS11980 | 2588459..2588815 | - | 357 | WP_005691056.1 | hypothetical protein | - |
| LRHK_RS11985 (LRHK_2661) | 2589066..2589941 | - | 876 | WP_005691054.1 | DUF1211 domain-containing protein | - |
| LRHK_RS11990 (LRHK_2663) | 2590169..2590849 | - | 681 | WP_005691052.1 | DNA-directed RNA polymerase subunit delta | - |
| LRHK_RS11995 (LRHK_2664) | 2590893..2591339 | - | 447 | WP_005685261.1 | DUF1934 domain-containing protein | - |
| LRHK_RS12000 (LRHK_2665) | 2591752..2592600 | + | 849 | WP_005685259.1 | lipoate--protein ligase A | - |
| LRHK_RS12005 (LRHK_2666) | 2592590..2593942 | + | 1353 | WP_005691048.1 | HD domain-containing protein | - |
| LRHK_RS12010 (LRHK_2667) | 2593954..2594406 | - | 453 | WP_005685256.1 | NUDIX hydrolase | - |
| LRHK_RS12015 (LRHK_2668) | 2594478..2595536 | + | 1059 | WP_014571646.1 | YdcF family protein | - |
| LRHK_RS12020 (LRHK_2669) | 2595599..2595979 | + | 381 | WP_005714120.1 | large-conductance mechanosensitive channel protein MscL | - |
| LRHK_RS12025 (LRHK_2670) | 2596131..2596565 | - | 435 | WP_014571648.1 | hypothetical protein | - |
| LRHK_RS12030 (LRHK_2672) | 2596654..2596983 | - | 330 | WP_005691038.1 | ASCH domain-containing protein | - |
| LRHK_RS12035 (LRHK_2673) | 2597080..2598054 | - | 975 | WP_005691037.1 | ribose-phosphate diphosphokinase | - |
| LRHK_RS12040 (LRHK_2674) | 2598152..2599540 | - | 1389 | WP_005691034.1 | bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU | - |
| LRHK_RS12045 (LRHK_2675) | 2599874..2601079 | - | 1206 | WP_005691032.1 | VanZ family protein | - |
| LRHK_RS12050 (LRHK_2676) | 2601076..2601924 | - | 849 | WP_005685246.1 | pur operon repressor | - |
| LRHK_RS12055 (LRHK_2677) | 2602146..2602796 | + | 651 | WP_005685245.1 | ATP-binding cassette domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|