MGE detailed information
MGE type: IS/Tn MGE length: 930 bp
Accession: NC_017473 Location: 1346591..1347520 Organism: Lactobacillus casei LC2W Replicon: chromosome
Accession: NC_017473 Location: 1346591..1347520 Organism: Lactobacillus casei LC2W Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC2W_RS06840 () | 1342257..1342526 | + | 270 | WP_003570051.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LC2W_RS06845 () | 1342519..1342821 | + | 303 | WP_014951859.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LC2W_RS16885 () | 1343160..1343303 | + | 144 | WP_003574774.1 | hypothetical protein | - |
| LC2W_RS06850 () | 1343421..1344113 | + | 693 | WP_012491513.1 | hypothetical protein | - |
| LC2W_RS06855 () | 1344349..1346526 | + | 2178 | WP_012491514.1 | RNA-binding transcriptional accessory protein | - |
| LC2W_RS06860 () | 1346591..1347520 | - | 930 | WP_003599410.1 | IS30 family transposase ISLpl1 | Transposase |
| LC2W_RS06865 () | 1347959..1348669 | + | 711 | WP_012491515.1 | hypothetical protein | - |
| LC2W_RS15645 () | 1348899..1350335 | - | 1437 | Protein_1304 | IS1182 family transposase | - |
| LC2W_RS06885 () | 1350561..1351142 | - | 582 | WP_012491519.1 | ATP-binding protein | - |
| LC2W_RS06890 () | 1351238..1352317 | - | 1080 | WP_012491520.1 | DUF87 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|