MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 173093 bp
Accession: NC_017358 Location: 85055..258147 Organism: Helicobacter pylori Cuz20 Replicon: chromosome
Accession: NC_017358 Location: 85055..258147 Organism: Helicobacter pylori Cuz20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPCU_RS00410 () | 82200..82895 | - | 696 | WP_014534173.1 | aminodeoxyfutalosine nucleosidase | - |
| HPCU_RS00415 () | 82906..83835 | - | 930 | WP_001199059.1 | ACP S-malonyltransferase | - |
| HPCU_RS00425 () | 84261..85094 | + | 834 | WP_000788543.1 | type II restriction endonuclease | - |
| HPCU_RS00430 () | 85088..85918 | + | 831 | WP_000233883.1 | site-specific DNA-methyltransferase | - |
| HPCU_RS00435 () | 85942..86382 | - | 441 | WP_041202252.1 | O-antigen biosynthesis glycosyltransferase WbnK | VF |
| HPCU_RS00440 () | 86379..86840 | - | 462 | WP_000874765.1 | hypothetical protein | VF |
| HPCU_RS00445 () | 86938..87468 | - | 531 | WP_001125770.1 | hypothetical protein | - |
| HPCU_RS00450 () | 87541..88485 | + | 945 | WP_000447291.1 | D-2-hydroxyacid dehydrogenase | - |
| HPCU_RS00455 () | 88813..89526 | - | 714 | WP_000822925.1 | hypothetical protein | - |
| HPCU_RS00460 () | 89633..91093 | - | 1461 | WP_001117285.1 | threonine synthase | - |
| HPCU_RS00465 () | 91296..93332 | + | 2037 | WP_000033503.1 | Methyl-accepting chemotaxis protein PctB | VF |
| HPCU_RS00470 () | 93332..94438 | + | 1107 | WP_000905231.1 | epoxyqueuosine reductase QueH | - |
| HPCU_RS00475 () | 94554..95315 | + | 762 | WP_000853719.1 | outer membrane beta-barrel protein | - |
| HPCU_RS00480 () | 95298..96080 | - | 783 | WP_000922050.1 | glycosyltransferase | - |
| HPCU_RS00485 () | 96111..97808 | - | 1698 | WP_000232117.1 | Methyl-accepting chemotaxis protein 4 | VF |
| HPCU_RS00490 () | 98016..99761 | - | 1746 | WP_000737604.1 | 5'-nucleotidase C-terminal domain-containing protein | - |
| HPCU_RS00495 () | 99894..100361 | - | 468 | WP_000856641.1 | S-ribosylhomocysteine lyase | VF |
| HPCU_RS00500 () | 100375..101517 | - | 1143 | WP_000551108.1 | cystathionine gamma-synthase | - |
| HPCU_RS00505 () | 101538..102455 | - | 918 | WP_014534174.1 | O-acetylserine-dependent cystathionine beta-synthase | - |
| HPCU_RS00510 () | 102563..102990 | + | 428 | Protein_95 | hypothetical protein | - |
| HPCU_RS00515 () | 103129..104991 | - | 1863 | WP_000521032.1 | molecular chaperone DnaK | - |
| HPCU_RS00520 () | 105022..105597 | - | 576 | WP_000653245.1 | nucleotide exchange factor GrpE | - |
| HPCU_RS00525 () | 105597..106427 | - | 831 | WP_000233953.1 | HrcA family transcriptional regulator | - |
| HPCU_RS00530 () | 106647..107285 | + | 639 | WP_014534176.1 | class II aldolase and adducin N-terminal domain-containing protein | - |
| HPCU_RS00535 () | 107306..107602 | + | 297 | WP_000154710.1 | hypothetical protein | - |
| HPCU_RS00540 () | 107612..109495 | - | 1884 | WP_014534177.1 | hypothetical protein | VF |
| HPCU_RS00545 () | 109558..111102 | - | 1545 | WP_000010002.1 | Flagellin B | VF |
| HPCU_RS00550 () | 111268..113478 | + | 2211 | WP_000681458.1 | type I DNA topoisomerase | - |
| HPCU_RS00555 () | 113471..114397 | + | 927 | WP_014534178.1 | radical SAM protein | - |
| HPCU_RS00560 () | 114542..115660 | - | 1119 | WP_041202354.1 | DUF874 family protein | - |
| HPCU_RS00565 () | 115798..118236 | - | 2439 | WP_001269184.1 | pyruvate, water dikinase | - |
| HPCU_RS00575 () | 118596..120434 | + | 1839 | WP_001271870.1 | threonine--tRNA ligase | - |
| HPCU_RS00580 () | 120431..121042 | + | 612 | WP_000089221.1 | translation initiation factor IF-3 | - |
| HPCU_RS00585 () | 121023..121217 | + | 195 | WP_001125542.1 | 50S ribosomal protein L35 | - |
| HPCU_RS00590 () | 121312..121662 | + | 351 | WP_001264172.1 | 50S ribosomal protein L20 | - |
| HPCU_RS00595 () | 121863..122723 | + | 861 | WP_000750191.1 | hypothetical protein | VF |
| HPCU_RS00605 () | 123074..123505 | + | 432 | WP_000731671.1 | DUF1104 domain-containing protein | - |
| HPCU_RS00610 () | 123908..124777 | + | 870 | WP_000821528.1 | hypothetical protein | - |
| HPCU_RS08325 () | 125196..125468 | + | 273 | WP_001267683.1 | hypothetical protein | - |
| HPCU_RS00620 () | 125634..127001 | - | 1368 | WP_000146052.1 | L-serine ammonia-lyase | - |
| HPCU_RS00625 () | 127001..128242 | - | 1242 | WP_000046342.1 | HAAAP family serine/threonine permease | - |
| HPCU_RS00630 () | 128424..129773 | + | 1350 | WP_000072721.1 | Phospho-2-dehydro-3-deoxyheptonate aldolase | VF |
| HPCU_RS00640 () | 130214..130672 | - | 459 | WP_000412979.1 | peroxiredoxin | - |
| HPCU_RS00645 () | 130682..131317 | - | 636 | WP_000032027.1 | lactate utilization protein C | - |
| HPCU_RS00650 () | 131310..132755 | - | 1446 | WP_000417266.1 | iron-sulfur cluster-binding protein | - |
| HPCU_RS00655 () | 132784..133512 | - | 729 | WP_000867260.1 | (Fe-S)-binding protein | - |
| HPCU_RS00660 () | 133733..135382 | + | 1650 | WP_000398102.1 | L-lactate permease | - |
| HPCU_RS00665 () | 135430..137085 | + | 1656 | WP_001288477.1 | L-lactate permease | - |
| HPCU_RS00670 () | 137109..138095 | - | 987 | WP_079991975.1 | adenine-specific DNA glycosylase | - |
| HPCU_RS00675 () | 138096..139544 | - | 1449 | WP_000595283.1 | DASS family sodium-coupled anion symporter | - |
| HPCU_RS00680 () | 139714..141180 | + | 1467 | WP_001157668.1 | cytochrome-c oxidase, cbb3-type subunit I | - |
| HPCU_RS00685 () | 141193..141891 | + | 699 | WP_000490769.1 | cytochrome-c oxidase, cbb3-type subunit II | - |
| HPCU_RS00690 () | 141902..142120 | + | 219 | WP_001868213.1 | cytochrome c oxidase, cbb3-type, CcoQ subunit | - |
| HPCU_RS00695 () | 142122..143000 | + | 879 | WP_000346898.1 | cytochrome-c oxidase, cbb3-type subunit III | - |
| HPCU_RS00700 () | 143011..143217 | + | 207 | WP_000670495.1 | DUF4006 family protein | - |
| HPCU_RS00705 () | 143318..143902 | + | 585 | WP_001222052.1 | hypothetical protein | - |
| HPCU_RS00710 () | 143914..144495 | + | 582 | WP_000660380.1 | hypothetical protein | - |
| HPCU_RS00715 () | 144582..145349 | + | 768 | WP_000506331.1 | hypothetical protein | - |
| HPCU_RS00720 () | 145346..146209 | - | 864 | WP_000626331.1 | menaquinone biosynthesis family protein | - |
| HPCU_RS00725 () | 146308..147351 | + | 1044 | WP_000963126.1 | recombinase RecA | - |
| HPCU_RS00730 () | 147363..148643 | + | 1281 | WP_000955633.1 | phosphopyruvate hydratase | - |
| HPCU_RS00735 () | 148636..148911 | + | 276 | WP_000146217.1 | hypothetical protein | - |
| HPCU_RS00740 () | 148927..149523 | + | 597 | WP_001919563.1 | AMIN domain-containing protein | - |
| HPCU_RS00745 () | 149528..150016 | + | 489 | WP_001164268.1 | shikimate kinase | - |
| HPCU_RS00750 () | 150037..150993 | + | 957 | WP_000952257.1 | PDC sensor domain-containing protein | - |
| HPCU_RS00755 () | 150990..152105 | - | 1116 | WP_000022433.1 | General stress protein A | VF |
| HPCU_RS00760 () | 152256..153173 | + | 918 | WP_000597860.1 | Sel1 repeat protein HcpD | - |
| HPCU_RS08410 () | 153636..153773 | - | 138 | WP_195154940.1 | hypothetical protein | - |
| HPCU_RS00765 () | 153952..154674 | - | 723 | WP_000532135.1 | putative transcriptional regulatory protein | VF |
| HPCU_RS00770 () | 154675..155646 | - | 972 | WP_000476552.1 | porphobilinogen synthase | - |
| HPCU_RS00775 () | 155669..157000 | - | 1332 | WP_001212437.1 | HAMP domain-containing histidine kinase | - |
| HPCU_RS00780 () | 157026..157703 | - | 678 | WP_000573700.1 | Response regulator ArlR | VF |
| HPCU_RS00785 () | 157938..158402 | - | 465 | WP_014534181.1 | hypothetical protein | - |
| HPCU_RS00790 () | 158393..158656 | - | 264 | WP_001127855.1 | tetratricopeptide repeat protein | - |
| HPCU_RS00795 () | 158689..159969 | - | 1281 | WP_001077520.1 | U32 family peptidase | - |
| HPCU_RS00800 () | 159972..160691 | - | 720 | WP_000189972.1 | hypothetical protein | - |
| HPCU_RS00805 () | 160766..161857 | - | 1092 | WP_000371099.1 | peptide chain release factor 2 | - |
| HPCU_RS00810 () | 161918..163093 | - | 1176 | WP_000622875.1 | molybdopterin molybdotransferase MoeA | - |
| HPCU_RS00815 () | 163103..163870 | - | 768 | WP_000883713.1 | hypothetical protein | VF |
| HPCU_RS00820 () | 163845..164591 | - | 747 | WP_041202355.1 | EI24 domain-containing protein | - |
| HPCU_RS00830 () | 165069..165968 | + | 900 | WP_000739403.1 | Putative peptidyl-prolyl cis-trans isomerase | VF |
| HPCU_RS00835 () | 165985..166908 | + | 924 | WP_000960448.1 | class II fructose-1,6-bisphosphate aldolase | - |
| HPCU_RS00840 () | 166930..167493 | + | 564 | WP_000974265.1 | elongation factor P | - |
| HPCU_RS00845 () | 167624..168652 | - | 1029 | WP_000941828.1 | Pseudaminic acid synthase | VF |
| HPCU_RS00850 () | 168656..169297 | - | 642 | WP_000588227.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HPCU_RS00855 () | 169297..170571 | - | 1275 | WP_001236922.1 | apolipoprotein N-acyltransferase | - |
| HPCU_RS00860 () | 170808..171509 | + | 702 | WP_001106348.1 | CvpA family protein | - |
| HPCU_RS00865 () | 171519..173024 | + | 1506 | WP_000492522.1 | lysine--tRNA ligase | - |
| HPCU_RS00870 () | 173024..174274 | + | 1251 | WP_000323095.1 | serine hydroxymethyltransferase | - |
| HPCU_RS00875 () | 174285..174827 | + | 543 | WP_000138082.1 | DUF1882 domain-containing protein | - |
| HPCU_RS00880 () | 174849..175646 | + | 798 | WP_001290534.1 | hypothetical protein | - |
| HPCU_RS08415 () | 175815..176036 | + | 222 | WP_195154941.1 | hypothetical protein | - |
| HPCU_RS00885 () | 176033..177572 | - | 1540 | Protein_168 | DUF262 domain-containing protein | - |
| HPCU_RS00895 () | 177898..178434 | + | 537 | WP_000890447.1 | TIGR00645 family protein | - |
| HPCU_RS00900 () | 178440..179948 | - | 1509 | WP_000689084.1 | Cardiolipin synthase C | VF |
| HPCU_RS00905 () | 179970..180707 | - | 738 | WP_001282387.1 | fumarate reductase iron-sulfur subunit | - |
| HPCU_RS00910 () | 180700..182844 | - | 2145 | WP_000705996.1 | fumarate reductase flavoprotein subunit | - |
| HPCU_RS00915 () | 182854..183621 | - | 768 | WP_001183655.1 | fumarate reductase cytochrome b subunit | - |
| HPCU_RS00920 () | 183834..184538 | + | 705 | WP_000160974.1 | triose-phosphate isomerase | - |
| HPCU_RS00925 () | 184548..185375 | + | 828 | WP_000506195.1 | enoyl-ACP reductase FabI | - |
| HPCU_RS00930 () | 185385..186395 | + | 1011 | WP_000777141.1 | UDP-3-O-acylglucosamine N-acyltransferase | VF |
| HPCU_RS00935 () | 186974..187795 | - | 822 | WP_000390760.1 | hypothetical protein | - |
| HPCU_RS00940 () | 187795..188646 | - | 852 | WP_000344482.1 | hypothetical protein | - |
| HPCU_RS00945 () | 188663..189544 | - | 882 | WP_000781007.1 | hypothetical protein | - |
| HPCU_RS00950 () | 189598..189924 | - | 327 | WP_041202259.1 | hypothetical protein | - |
| HPCU_RS00955 () | 189924..190481 | - | 558 | WP_000323011.1 | hypothetical protein | - |
| HPCU_RS00960 () | 190481..191293 | - | 813 | WP_000381807.1 | hypothetical protein | - |
| HPCU_RS00965 () | 191297..191842 | - | 546 | WP_000275011.1 | hypothetical protein | - |
| HPCU_RS00970 () | 191898..192113 | - | 216 | WP_000770559.1 | hypothetical protein | - |
| HPCU_RS00975 () | 192113..193117 | - | 1005 | WP_000364392.1 | hypothetical protein | - |
| HPCU_RS00980 () | 193119..193445 | - | 327 | WP_000983250.1 | hypothetical protein | - |
| HPCU_RS00985 () | 193442..193669 | - | 228 | WP_000267027.1 | hypothetical protein | - |
| HPCU_RS00990 () | 193680..193892 | - | 213 | WP_000789958.1 | hypothetical protein | - |
| HPCU_RS00995 () | 193951..195510 | - | 1560 | WP_000369176.1 | hypothetical protein | - |
| HPCU_RS01000 () | 195616..197421 | - | 1806 | WP_000348089.1 | hypothetical protein | - |
| HPCU_RS01005 () | 197491..197919 | - | 429 | WP_000466140.1 | hypothetical protein | - |
| HPCU_RS01010 () | 198059..198418 | - | 360 | WP_000810961.1 | hypothetical protein | - |
| HPCU_RS01015 () | 198432..199553 | - | 1122 | WP_000890564.1 | DUF4043 family protein | - |
| HPCU_RS01020 () | 199564..200124 | - | 561 | WP_000022957.1 | hypothetical protein | - |
| HPCU_RS01025 () | 200369..200956 | - | 588 | WP_000573786.1 | hypothetical protein | - |
| HPCU_RS01030 () | 200953..201348 | - | 396 | WP_041202262.1 | hypothetical protein | - |
| HPCU_RS08335 () | 201459..204794 | - | 3336 | WP_041202356.1 | DUF3519 domain-containing protein | - |
| HPCU_RS08420 () | 204763..204963 | + | 201 | Protein_198 | hypothetical protein | - |
| HPCU_RS01045 () | 207376..209028 | - | 1653 | WP_000118379.1 | hypothetical protein | - |
| HPCU_RS01050 () | 209032..210603 | - | 1572 | WP_000705262.1 | DNA primase | - |
| HPCU_RS01055 () | 210600..211775 | - | 1176 | WP_000429247.1 | helicase DnaB | - |
| HPCU_RS01060 () | 211786..212052 | - | 267 | WP_001225500.1 | hypothetical protein | - |
| HPCU_RS01065 () | 212244..213194 | - | 951 | WP_001106764.1 | helix-turn-helix domain-containing protein | - |
| HPCU_RS01070 () | 213191..213499 | - | 309 | WP_000191220.1 | hypothetical protein | - |
| HPCU_RS01075 () | 213502..213708 | - | 207 | WP_000591610.1 | hypothetical protein | - |
| HPCU_RS01080 () | 213705..214853 | - | 1149 | WP_041202264.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HPCU_RS01085 () | 214962..215261 | - | 300 | WP_001250151.1 | hypothetical protein | - |
| HPCU_RS01095 () | 215560..216717 | + | 1158 | WP_000655143.1 | methionine adenosyltransferase | - |
| HPCU_RS01100 () | 216784..217197 | + | 414 | WP_000813725.1 | nucleoside-diphosphate kinase | - |
| HPCU_RS01105 () | 217222..217578 | + | 357 | WP_001159189.1 | hypothetical protein | - |
| HPCU_RS01110 () | 217594..217740 | + | 147 | WP_000290428.1 | 50S ribosomal protein L32 | - |
| HPCU_RS01115 () | 217808..218827 | + | 1020 | WP_014534186.1 | phosphate acyltransferase PlsX | - |
| HPCU_RS01120 () | 218852..219847 | + | 996 | WP_000397777.1 | ketoacyl-ACP synthase III | - |
| HPCU_RS01125 () | 219871..220173 | + | 303 | WP_014534187.1 | hypothetical protein | - |
| HPCU_RS01130 () | 220471..220854 | - | 384 | WP_000473927.1 | hypothetical protein | - |
| HPCU_RS01135 () | 220900..223929 | - | 3030 | WP_014534188.1 | hypothetical protein | - |
| HPCU_RS01140 () | 223894..225135 | + | 1242 | WP_000249700.1 | Mrp/NBP35 family ATP-binding protein | - |
| HPCU_RS01145 () | 225149..226305 | - | 1157 | Protein_218 | General stress protein A | VF |
| HPCU_RS01155 () | 226455..227807 | + | 1353 | WP_041202358.1 | outer membrane beta-barrel protein HofA | - |
| HPCU_RS01160 () | 227880..228644 | + | 765 | WP_000667750.1 | hypothetical protein | - |
| HPCU_RS01165 () | 228655..230571 | + | 1917 | WP_000332152.1 | hypothetical protein | - |
| HPCU_RS01170 () | 230561..230863 | + | 303 | WP_000649843.1 | TrbC/VirB2 family protein | - |
| HPCU_RS01175 () | 230864..231124 | + | 261 | WP_000602756.1 | hypothetical protein | - |
| HPCU_RS01180 () | 231137..233635 | + | 2499 | WP_000478388.1 | Type IV secretion system protein PtlC | VF |
| HPCU_RS01185 () | 233628..235562 | + | 1935 | WP_000277566.1 | type IA DNA topoisomerase | - |
| HPCU_RS01190 () | 235692..236678 | + | 987 | WP_000416482.1 | hypothetical protein | VF |
| HPCU_RS01195 () | 236678..238219 | + | 1542 | WP_000737114.1 | hypothetical protein | VF |
| HPCU_RS01200 () | 238216..239451 | + | 1236 | WP_000734992.1 | Type IV secretion system protein virB10 | VF |
| HPCU_RS01205 () | 239521..239814 | + | 294 | WP_000773944.1 | hypothetical protein | - |
| HPCU_RS01210 () | 239807..240070 | + | 264 | WP_000564645.1 | hypothetical protein | - |
| HPCU_RS01215 () | 240067..240365 | + | 299 | Protein_231 | hypothetical protein | - |
| HPCU_RS01220 () | 240365..241306 | + | 942 | WP_000625128.1 | Type IV secretion system protein VirB11 | VF |
| HPCU_RS01225 () | 241303..241731 | + | 429 | WP_014534191.1 | hypothetical protein | - |
| HPCU_RS01230 () | 241756..242046 | + | 291 | WP_000159820.1 | hypothetical protein | - |
| HPCU_RS01235 () | 242047..242604 | + | 558 | WP_001167784.1 | hypothetical protein | - |
| HPCU_RS01240 () | 242605..244332 | + | 1728 | WP_001208200.1 | Conjugal transfer protein TraG | VF |
| HPCU_RS01245 () | 244607..244888 | - | 282 | WP_000921941.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| HPCU_RS01250 () | 244881..245195 | - | 315 | WP_000065288.1 | hypothetical protein | Antitoxin Detail |
| HPCU_RS01255 () | 245476..247383 | + | 1908 | WP_001162708.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HPCU_RS01260 () | 247408..248592 | - | 1185 | WP_000665504.1 | hypothetical protein | - |
| HPCU_RS01265 () | 248624..248893 | - | 270 | WP_000394629.1 | hypothetical protein ; Integrase | Integrase |
| HPCU_RS01270 () | 248978..249634 | - | 657 | WP_000587367.1 | ParA family protein | - |
| HPCU_RS01275 () | 249887..257733 | - | 7847 | Protein_243 | Eco57I restriction-modification methylase domain-containing protein | - |
| HPCU_RS01280 () | 257886..258923 | + | 1038 | WP_001075342.1 | hypothetical protein | - |
| HPCU_RS01285 () | 258924..260258 | + | 1335 | WP_000923287.1 | hypothetical protein | - |
| HPCU_RS01290 () | 260302..262494 | + | 2193 | WP_000861085.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|