MGE detailed information
MGE type: Prophage MGE length: 42081 bp
Accession: NC_017353 Location: 887581..929661 Organism: Staphylococcus lugdunensis N920143 Replicon: chromosome
Accession: NC_017353 Location: 887581..929661 Organism: Staphylococcus lugdunensis N920143 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLUG_RS03990 () | 883456..883884 | + | 429 | WP_002478850.1 | galactose-6-phosphate isomerase subunit LacA | - |
| SLUG_RS03995 () | 883900..884415 | + | 516 | WP_002460010.1 | galactose-6-phosphate isomerase subunit LacB | - |
| SLUG_RS04000 () | 884428..885363 | + | 936 | WP_002478851.1 | tagatose-6-phosphate kinase | - |
| SLUG_RS04005 () | 885367..886341 | + | 975 | WP_002460008.1 | tagatose-bisphosphate aldolase | - |
| SLUG_RS04010 () | 886361..886672 | + | 312 | WP_002460006.1 | PTS lactose transporter subunit IIA | - |
| SLUG_RS04015 () | 886678..887559 | + | 882 | Protein_805 | PTS transporter subunit EIIC | - |
| SLUG_RS04020 () | 887581..888963 | - | 1383 | WP_014533238.1 | Tn3 family transposase ISPsy42 | Transposase |
| SLUG_RS04025 () | 889021..889569 | - | 549 | WP_014533239.1 | hypothetical protein | - |
| SLUG_RS04030 () | 889591..890100 | - | 510 | WP_014533240.1 | hypothetical protein | - |
| SLUG_RS04035 () | 890113..890577 | - | 465 | WP_014533241.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| SLUG_RS04040 () | 890592..890915 | - | 324 | WP_014533242.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SLUG_RS04045 () | 891081..891329 | + | 249 | WP_044019727.1 | helix-turn-helix domain-containing protein | - |
| SLUG_RS04050 () | 891344..892225 | + | 882 | WP_014533244.1 | DUF3102 domain-containing protein | - |
| SLUG_RS04055 () | 892238..892732 | + | 495 | WP_014533245.1 | ORF6C domain-containing protein | - |
| SLUG_RS12905 () | 892771..892932 | + | 162 | WP_014533246.1 | hypothetical protein | - |
| SLUG_RS04065 () | 892938..893201 | - | 264 | WP_014533247.1 | CRISPR-associated protein Cas2 | - |
| SLUG_RS04070 () | 893259..894014 | + | 756 | WP_014533248.1 | phage antirepressor KilAC domain-containing protein | - |
| SLUG_RS12680 () | 894030..894173 | + | 144 | WP_002478861.1 | hypothetical protein | - |
| SLUG_RS04075 () | 894183..894785 | - | 603 | WP_014533249.1 | hypothetical protein | - |
| SLUG_RS04080 () | 895013..895192 | + | 180 | WP_002478864.1 | hypothetical protein | - |
| SLUG_RS04085 () | 895261..895746 | + | 486 | WP_002478865.1 | siphovirus Gp157 family protein | - |
| SLUG_RS04090 () | 895747..896421 | + | 675 | WP_002478866.1 | ERF family protein | - |
| SLUG_RS04095 () | 896418..896834 | + | 417 | WP_014533250.1 | single-stranded DNA-binding protein | - |
| SLUG_RS04100 () | 896849..897526 | + | 678 | WP_014533251.1 | hypothetical protein | - |
| SLUG_RS04105 () | 897516..898238 | + | 723 | Protein_824 | phage protein | - |
| SLUG_RS04110 () | 898332..899117 | + | 786 | WP_014533253.1 | ATP-binding protein | - |
| SLUG_RS12910 () | 899114..899278 | + | 165 | WP_014533254.1 | hypothetical protein | - |
| SLUG_RS04120 () | 899268..899510 | + | 243 | WP_014533255.1 | hypothetical protein | - |
| SLUG_RS04125 () | 899519..899926 | + | 408 | WP_002478873.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SLUG_RS04130 () | 899923..900237 | + | 315 | WP_014533256.1 | hypothetical protein | - |
| SLUG_RS12480 () | 900500..900757 | + | 258 | Protein_830 | DUF3310 domain-containing protein | - |
| SLUG_RS04140 () | 900761..901132 | + | 372 | WP_014533259.1 | hypothetical protein | - |
| SLUG_RS04145 () | 901133..901414 | + | 282 | WP_002478878.1 | DUF1024 family protein | - |
| SLUG_RS12915 () | 901404..901565 | + | 162 | WP_002478879.1 | hypothetical protein | - |
| SLUG_RS04150 () | 901566..901991 | + | 426 | WP_002478880.1 | dUTP diphosphatase | - |
| SLUG_RS12685 () | 902028..902180 | + | 153 | WP_002478881.1 | DUF1381 domain-containing protein | - |
| SLUG_RS12920 () | 902170..902337 | + | 168 | WP_002478882.1 | hypothetical protein | - |
| SLUG_RS12810 () | 902334..902477 | + | 144 | WP_014533260.1 | hypothetical protein | - |
| SLUG_RS04155 () | 902481..902882 | + | 402 | WP_014533261.1 | hypothetical protein | - |
| SLUG_RS04160 () | 903103..903531 | + | 429 | WP_044019728.1 | hypothetical protein | - |
| SLUG_RS04165 () | 903518..904798 | + | 1281 | WP_014533263.1 | PBSX family phage terminase large subunit | - |
| SLUG_RS04170 () | 904810..906339 | + | 1530 | WP_002478887.1 | phage portal protein | - |
| SLUG_RS04175 () | 906346..907296 | + | 951 | WP_014533264.1 | minor capsid protein | - |
| SLUG_RS12925 () | 907293..907445 | + | 153 | WP_014533265.1 | hypothetical protein | - |
| SLUG_RS12930 () | 907432..907581 | + | 150 | WP_173362267.1 | hypothetical protein | - |
| SLUG_RS04185 () | 907826..908434 | + | 609 | WP_014533266.1 | DUF4355 domain-containing protein | - |
| SLUG_RS04190 () | 908452..909372 | + | 921 | WP_002478891.1 | phage major capsid protein | - |
| SLUG_RS04195 () | 909394..909663 | + | 270 | WP_002478892.1 | hypothetical protein | - |
| SLUG_RS04200 () | 909665..909994 | + | 330 | WP_002478893.1 | phage head-tail connector protein | - |
| SLUG_RS04205 () | 909991..910293 | + | 303 | WP_014533267.1 | hypothetical protein | - |
| SLUG_RS04210 () | 910295..910642 | + | 348 | WP_014533268.1 | HK97 gp10 family phage protein | - |
| SLUG_RS04215 () | 910654..911043 | + | 390 | WP_002478896.1 | hypothetical protein | - |
| SLUG_RS04220 () | 911091..911645 | + | 555 | WP_002478897.1 | phage major tail protein, TP901-1 family | - |
| SLUG_RS04225 () | 911706..912065 | + | 360 | WP_002478898.1 | tail assembly chaperone | - |
| SLUG_RS04230 () | 912110..912454 | + | 345 | WP_002478899.1 | hypothetical protein | - |
| SLUG_RS04235 () | 912469..916002 | + | 3534 | WP_014533269.1 | tail protein | - |
| SLUG_RS04240 () | 916014..916973 | + | 960 | WP_002478901.1 | phage tail family protein | - |
| SLUG_RS04245 () | 916984..918219 | + | 1236 | WP_002478902.1 | phage tail protein | - |
| SLUG_RS04250 () | 918220..920094 | + | 1875 | WP_014533270.1 | DUF2817 domain-containing protein | - |
| SLUG_RS04255 () | 920108..921265 | + | 1158 | WP_014533271.1 | BppU family phage baseplate upper protein | - |
| SLUG_RS04260 () | 921281..921703 | + | 423 | WP_014533272.1 | hypothetical protein | - |
| SLUG_RS04265 () | 921684..922082 | + | 399 | WP_014533273.1 | hypothetical protein | - |
| SLUG_RS04270 () | 922134..924023 | + | 1890 | WP_014533274.1 | Bifunctional autolysin | VF |
| SLUG_RS04275 () | 924077..926830 | + | 2754 | WP_014533275.1 | ISNCY family transposase KIS | Transposase |
| SLUG_RS04280 () | 926887..927159 | + | 273 | WP_002478910.1 | phage holin | - |
| SLUG_RS04285 () | 927159..928568 | + | 1410 | WP_014533276.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SLUG_RS04290 () | 928763..929038 | + | 276 | WP_014533277.1 | hypothetical protein | - |
| SLUG_RS12960 () | 929035..929661 | + | 627 | WP_014533278.1 | hypothetical protein | - |
| SLUG_RS04300 () | 929720..930592 | + | 873 | Protein_868 | PTS lactose transporter subunit IIBC | - |
| SLUG_RS04305 () | 930608..932020 | + | 1413 | WP_104013903.1 | 6-phospho-beta-galactosidase | - |
| SLUG_RS04310 () | 932244..933101 | + | 858 | WP_002460003.1 | alpha/beta hydrolase | - |
| SLUG_RS04315 () | 933196..934197 | + | 1002 | WP_002478915.1 | NADP-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|