MGE detailed information
MGE type: Prophage MGE length: 36748 bp
Accession: NC_017341 Location: 879801..916548 Organism: Staphylococcus aureus subsp. aureus str. JKD6008 Replicon: chromosome
Accession: NC_017341 Location: 879801..916548 Organism: Staphylococcus aureus subsp. aureus str. JKD6008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAA6008_RS04265 () | 874902..877703 | + | 2802 | WP_001056228.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| SAA6008_RS04270 () | 877924..879450 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| SAA6008_RS04275 () | 879801..880823 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| SAA6008_RS04280 () | 881158..881628 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| SAA6008_RS04285 () | 881969..882655 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| SAA6008_RS04290 () | 883012..883212 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| SAA6008_RS04295 () | 883708..883926 | - | 219 | WP_000005877.1 | hypothetical protein | - |
| SAA6008_RS04300 () | 883988..884272 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| SAA6008_RS04305 () | 884360..884929 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| SAA6008_RS04310 () | 885117..885305 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| SAA6008_RS04315 () | 885334..885594 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| SAA6008_RS04320 () | 885935..886138 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| SAA6008_RS04325 () | 886135..886371 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| SAA6008_RS04330 () | 886596..887177 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| SAA6008_RS04335 () | 887250..887867 | - | 618 | WP_000255564.1 | LysE/ArgO family amino acid transporter | - |
| SAA6008_RS04340 () | 888022..888516 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| SAA6008_RS04345 () | 888915..889337 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| SAA6008_RS04350 () | 889485..890201 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| SAA6008_RS04355 () | 890284..890823 | + | 540 | WP_000422905.1 | nitroreductase | - |
| SAA6008_RS04360 () | 890973..891293 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| SAA6008_RS04365 () | 891437..891793 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| SAA6008_RS04370 () | 891951..892331 | + | 381 | WP_000290486.1 | glycine cleavage system protein GcvH | - |
| SAA6008_RS04380 () | 892510..893097 | + | 588 | Protein_842 | DUF1963 domain-containing protein | - |
| SAA6008_RS04385 () | 893232..894317 | + | 1086 | WP_000868132.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAA6008_RS04390 () | 894314..896206 | + | 1893 | WP_001557544.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAA6008_RS04395 () | 896213..896590 | + | 378 | WP_000361059.1 | transposase | - |
| SAA6008_RS04400 () | 896741..897523 | + | 783 | WP_000067268.1 | Streptomycin 3''-adenylyltransferase | ARG |
| SAA6008_RS04405 () | 897649..898380 | - | 732 | WP_001072197.1 | rRNA adenine N-6-methyltransferase | ARG |
| SAA6008_RS16020 () | 898438..898497 | - | 60 | WP_181875734.1 | erythromycin resistance leader peptide | - |
| SAA6008_RS04410 () | 898889..899551 | + | 663 | WP_001092058.1 | class I SAM-dependent methyltransferase | - |
| SAA6008_RS04415 () | 899788..900075 | + | 288 | Protein_850 | DUF1963 domain-containing protein | - |
| SAA6008_RS04425 () | 900817..901203 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| SAA6008_RS04430 () | 901196..901492 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| SAA6008_RS04435 () | 901742..902767 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| SAA6008_RS04440 () | 902760..903455 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| SAA6008_RS04445 () | 903473..904294 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| SAA6008_RS04450 () | 904438..905658 | - | 1221 | WP_000264182.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SAA6008_RS04455 () | 905746..906474 | - | 729 | WP_000733773.1 | Enterotoxin type A | VF |
| SAA6008_RS04460 () | 906498..907226 | - | 729 | WP_001033317.1 | Enterotoxin type A | VF |
| SAA6008_RS04465 () | 907401..908135 | - | 735 | WP_000142630.1 | helix-turn-helix domain-containing protein | - |
| SAA6008_RS04470 () | 908285..908497 | + | 213 | WP_001063624.1 | ISNCY family transposase ISH7A | Transposase |
| SAA6008_RS04475 () | 908498..908770 | + | 273 | WP_001138298.1 | helix-turn-helix domain-containing protein | - |
| SAA6008_RS04480 () | 908782..908928 | + | 147 | WP_000784885.1 | hypothetical protein | - |
| SAA6008_RS04485 () | 908921..909130 | + | 210 | WP_001058492.1 | hypothetical protein | Antitoxin Detail |
| SAA6008_RS04490 () | 909133..909426 | + | 294 | WP_001103946.1 | DUF1474 family protein | Toxin Detail |
| SAA6008_RS04495 () | 909514..910383 | + | 870 | WP_001002692.1 | primase alpha helix C-terminal domain-containing protein | - |
| SAA6008_RS04500 () | 910400..911857 | + | 1458 | WP_000432707.1 | virulence-associated E family protein | - |
| SAA6008_RS04505 () | 912159..912521 | + | 363 | WP_001039172.1 | hypothetical protein | - |
| SAA6008_RS04510 () | 912523..912807 | + | 285 | WP_000998180.1 | hypothetical protein | - |
| SAA6008_RS04515 () | 912804..913445 | + | 642 | WP_001019783.1 | hypothetical protein | - |
| SAA6008_RS04520 () | 913872..914234 | + | 363 | WP_041174166.1 | hypothetical protein | - |
| SAA6008_RS04525 () | 914246..914824 | + | 579 | WP_000846279.1 | hypothetical protein | - |
| SAA6008_RS04530 () | 914842..915060 | + | 219 | WP_000448776.1 | capsid morphogenesis B protein | - |
| SAA6008_RS04535 () | 915111..915638 | + | 528 | WP_000771365.1 | spore coat protein | - |
| SAA6008_RS15445 () | 915770..915982 | + | 213 | WP_025174984.1 | hypothetical protein | - |
| SAA6008_RS04545 () | 915979..916548 | + | 570 | WP_001281786.1 | terminase small subunit | - |
| SAA6008_RS04550 () | 916977..917496 | + | 520 | Protein_876 | pathogenicity island protein | - |
| SAA6008_RS04555 () | 917522..917920 | + | 399 | WP_000453652.1 | hypothetical protein | - |
| SAA6008_RS04560 () | 917907..918686 | + | 780 | WP_000705255.1 | hypothetical protein | - |
| SAA6008_RS04565 () | 919209..919403 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| SAA6008_RS04570 () | 919636..920487 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|