MGE detailed information
MGE type: IS/Tn MGE length: 486 bp
Accession: NC_017263 Location: 511..996 Organism: Yersinia pestis biovar Medievalis str. Harbin 35 Replicon: plasmid pCD
Accession: NC_017263 Location: 511..996 Organism: Yersinia pestis biovar Medievalis str. Harbin 35 Replicon: plasmid pCD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YPC_RS20985 () | 352..996 | + | 645 | Protein_1 | IS3 family transposase ISYen3 | Transposase |
| YPC_RS20990 () | 1059..1451 | - | 393 | WP_002213403.1 | type III secretion system chaperone SycE/YerA | - |
| YPC_RS20995 () | 1645..2304 | + | 660 | WP_002229754.1 | type III secretion system effector GTPase activator YopE | - |
| YPC_RS21000 () | 2444..2743 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| YPC_RS21005 () | 2736..2978 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| YPC_RS24010 () | 3144..3436 | - | 293 | Protein_6 | IS6 family transposase | - |
| YPC_RS24845 () | 3522..3695 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| YPC_RS24455 () | 3844..4080 | - | 237 | WP_154020274.1 | hypothetical protein | - |
| YPC_RS21015 () | 4240..5205 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|