NC_0171902126041..2279300

MGE detailed information

MGE type: Prophage        MGE length: 153260 bp
Accession: NC_017190        Location: 2126041..2279300         Organism: Bacillus amyloliquefaciens LL3       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LL3_RS10385 () 2122168..2122773 - 606 WP_013352608.1 HD domain-containing protein -
LL3_RS10390 () 2122785..2123267 - 483 WP_013352609.1 glutathione peroxidase -
LL3_RS10395 () 2123550..2124455 + 906 WP_013352610.1 homoserine O-succinyltransferase -
LL3_RS10400 () 2124680..2125822 + 1143 WP_013352611.1 diglucosyl diacylglycerol synthase -
LL3_RS21035 () 2125899..2126025 + 127 Protein_2055 hypothetical protein -
LL3_RS10405 () 2126041..2126241 + 201 WP_003153604.1 cold-shock protein CspD -
LL3_RS10410 () 2126293..2126475 - 183 WP_013352612.1 hypothetical protein -
LL3_RS10415 () 2126637..2126894 + 258 WP_013352613.1 DUF2564 family protein -
LL3_RS10420 () 2126921..2127103 - 183 WP_013352614.1 zinc-finger domain-containing protein -
LL3_RS10425 () 2127106..2127777 - 672 WP_013352615.1 ribonuclease H family protein -
LL3_RS10430 () 2127859..2128539 + 681 WP_013352616.1 queuosine precursor transporter -
LL3_RS10435 () 2128546..2128938 + 393 WP_014470262.1 reverse transcriptase-like protein -
LL3_RS10440 () 2128990..2129118 + 129 WP_003153575.1 small, acid-soluble spore protein L -
LL3_RS10445 () 2129124..2130011 - 888 WP_013352618.1 5'-3' exonuclease -
LL3_RS21040 () 2130106..2130249 - 144 WP_013352619.1 hypothetical protein -
LL3_RS10450 () 2130326..2130583 - 258 WP_014470260.1 YpbS family protein -
LL3_RS10455 () 2130651..2134232 - 3582 WP_013352621.1 dynamin family protein -
LL3_RS21045 () 2134417..2134512 - 96 WP_118977655.1 Fur-regulated basic protein FbpC -
LL3_RS10460 () 2134585..2135091 - 507 WP_013352622.1 isoprenylcysteine carboxyl methyltransferase family protein -
LL3_RS10465 () 2135091..2136191 - 1101 WP_013352623.1 chalcone synthase -
LL3_RS10470 () 2136357..2136965 + 609 WP_014470258.1 GNAT family N-acetyltransferase -
LL3_RS10475 () 2136995..2137303 - 309 WP_013352625.1 MGMT family protein -
LL3_RS10480 () 2138199..2138495 + 297 WP_013352626.1 hypothetical protein -
LL3_RS10485 () 2138660..2139580 - 921 Protein_2074 purine permease -
LL3_RS10490 () 2139775..2140329 - 555 WP_014471917.1 Holliday junction resolvase RecU -
LL3_RS10495 () 2140427..2140666 + 240 WP_041915545.1 helix-turn-helix transcriptional regulator -
LL3_RS21435 () 2141061..2141231 - 171 WP_014471919.1 hypothetical protein -
LL3_RS21440 () 2141228..2141398 - 171 WP_041915546.1 hypothetical protein -
LL3_RS10505 () 2141399..2141947 - 549 WP_014471920.1 hypothetical protein -
LL3_RS10510 () 2141928..2142335 - 408 WP_041915547.1 hypothetical protein -
LL3_RS10515 () 2142373..2142627 - 255 WP_014471921.1 hypothetical protein -
LL3_RS10520 () 2142668..2143498 - 831 WP_014471922.1 metallophosphoesterase -
LL3_RS10525 () 2143658..2143870 + 213 WP_038458497.1 alpha/beta-type small acid-soluble spore protein -
LL3_RS10530 () 2143898..2144203 - 306 WP_014471923.1 hypothetical protein -
LL3_RS10535 () 2144369..2144674 - 306 WP_050807609.1 hypothetical protein -
LL3_RS10540 () 2144745..2145299 - 555 WP_050807610.1 hypothetical protein -
LL3_RS10545 () 2145292..2145669 - 378 WP_041915548.1 hypothetical protein -
LL3_RS10550 () 2145887..2146258 - 372 WP_014471927.1 hypothetical protein -
LL3_RS10555 () 2146318..2146704 - 387 WP_014471928.1 hypothetical protein -
LL3_RS10560 () 2146834..2147340 - 507 WP_014471929.1 dihydrofolate reductase -
LL3_RS10565 () 2147340..2148179 - 840 WP_014471930.1 thymidylate synthase -
LL3_RS10570 () 2148250..2148858 + 609 WP_041915549.1 DUF1643 domain-containing protein -
LL3_RS10580 () 2149312..2149611 - 300 WP_014471932.1 hypothetical protein -
LL3_RS10585 () 2149770..2150168 - 399 WP_014471934.1 hypothetical protein -
LL3_RS10590 () 2150286..2150720 + 435 WP_014471935.1 hypothetical protein -
LL3_RS10595 () 2150814..2151242 - 429 WP_014471936.1 dUTP diphosphatase -
LL3_RS10600 () 2151316..2151678 - 363 Protein_2097 hypothetical protein -
LL3_RS10605 () 2151721..2151963 - 243 WP_014471938.1 thiol reductase thioredoxin -
LL3_RS10610 () 2151988..2152725 - 738 WP_014471939.1 hypothetical protein -
LL3_RS10615 () 2152715..2153695 - 981 WP_041915551.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
LL3_RS10620 () 2153759..2154097 + 339 WP_041481780.1 hypothetical protein -
LL3_RS10625 () 2154081..2155037 - 957 Protein_2102 ribonucleotide-diphosphate reductase subunit alpha -
LL3_RS10630 () 2155318..2155674 - 357 Protein_2103 ribonucleotide-diphosphate reductase subunit alpha -
LL3_RS10635 () 2155739..2156470 - 732 WP_014471941.1 GIY-YIG nuclease family protein -
LL3_RS20320 () 2156842..2157348 - 507 WP_202795684.1 HNH endonuclease -
LL3_RS10645 () 2157629..2158306 - 678 WP_148230874.1 ribonucleotide-diphosphate reductase subunit alpha -
LL3_RS10650 () 2158314..2158709 - 396 WP_014470230.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
LL3_RS10655 () 2158709..2159062 - 354 WP_014471944.1 hypothetical protein -
LL3_RS10660 () 2159114..2159446 - 333 WP_014470228.1 hypothetical protein -
LL3_RS10665 () 2159460..2159675 - 216 WP_041915615.1 DUF1653 domain-containing protein -
LL3_RS21055 () 2159722..2159940 - 219 WP_148230871.1 hypothetical protein -
LL3_RS10670 () 2160070..2160327 - 258 WP_041915616.1 hypothetical protein -
LL3_RS10680 () 2160636..2160983 - 348 WP_014471948.1 hypothetical protein -
LL3_RS10685 () 2160998..2161405 - 408 WP_041915553.1 hypothetical protein -
LL3_RS10695 () 2162058..2162264 - 207 WP_014471952.1 hypothetical protein -
LL3_RS10705 () 2162559..2162822 - 264 WP_041915554.1 hypothetical protein -
LL3_RS10720 () 2163593..2163811 - 219 WP_014471955.1 hypothetical protein -
LL3_RS10725 () 2163862..2165355 - 1494 WP_148230875.1 DNA (cytosine-5-)-methyltransferase -
LL3_RS10730 () 2165422..2166258 - 837 WP_014471957.1 site-specific DNA-methyltransferase -
LL3_RS10735 () 2166383..2166730 + 348 WP_041915557.1 hypothetical protein -
LL3_RS10740 () 2166792..2167310 - 519 WP_014471958.1 5'-3'-deoxyribonucleotidase -
LL3_RS10745 () 2167288..2167815 - 528 WP_014471959.1 AAA family ATPase -
LL3_RS21445 () 2167812..2167970 - 159 WP_014471960.1 hypothetical protein -
LL3_RS10750 () 2167975..2168178 - 204 WP_014471961.1 YorP family protein -
LL3_RS10755 () 2168190..2168897 - 708 WP_014471962.1 hypothetical protein -
LL3_RS10760 () 2168924..2172853 - 3930 WP_014471963.1 DNA polymerase III subunit alpha -
LL3_RS10765 () 2172866..2174596 - 1731 WP_014471964.1 single-stranded-DNA-specific exonuclease RecJ -
LL3_RS10770 () 2174596..2175732 - 1137 WP_014471965.1 hypothetical protein -
LL3_RS10775 () 2175748..2177262 - 1515 WP_014471966.1 replicative DNA helicase -
LL3_RS10780 () 2177277..2177747 - 471 WP_014471967.1 hypothetical protein -
LL3_RS10785 () 2177788..2178759 - 972 WP_014471968.1 ATP-binding protein -
LL3_RS10790 () 2178849..2179763 - 915 WP_014471969.1 hypothetical protein -
LL3_RS10795 () 2179786..2180166 - 381 WP_041915558.1 hypothetical protein -
LL3_RS10800 () 2180305..2180688 - 384 WP_041915559.1 hypothetical protein -
LL3_RS10805 () 2180880..2181257 - 378 WP_014471971.1 hypothetical protein -
LL3_RS10810 () 2181296..2183038 - 1743 WP_014471972.1 right-handed parallel beta-helix repeat-containing protein -
LL3_RS10815 () 2183035..2183856 - 822 WP_014471973.1 poly-gamma-glutamate hydrolase family protein -
LL3_RS10820 () 2183961..2184179 - 219 WP_014471974.1 hypothetical protein -
LL3_RS10825 () 2184254..2184526 - 273 WP_014470192.1 hypothetical protein -
LL3_RS10830 () 2184516..2185403 - 888 WP_014470191.1 hypothetical protein -
LL3_RS10835 () 2185452..2185931 - 480 WP_014470190.1 hypothetical protein -
LL3_RS10840 () 2185947..2186198 - 252 WP_014471975.1 hypothetical protein -
LL3_RS10845 () 2186224..2186469 - 246 WP_014470188.1 hypothetical protein -
LL3_RS10850 () 2186540..2187214 + 675 WP_014470187.1 SOS response-associated peptidase -
LL3_RS10855 () 2187284..2188096 + 813 WP_014470186.1 ATP-dependent DNA ligase -
LL3_RS10860 () 2188314..2188511 - 198 WP_014470184.1 hypothetical protein -
LL3_RS10870 () 2188810..2189031 - 222 WP_041915561.1 hypothetical protein -
LL3_RS10875 () 2189426..2189788 - 363 WP_014471977.1 hypothetical protein -
LL3_RS10880 () 2189831..2190082 - 252 WP_014470180.1 hypothetical protein -
LL3_RS10885 () 2190126..2190341 - 216 WP_014471978.1 hypothetical protein -
LL3_RS10890 () 2190459..2190833 + 375 WP_041915562.1 hypothetical protein -
LL3_RS10895 () 2190847..2191077 - 231 WP_148230872.1 hypothetical protein -
LL3_RS10900 () 2191213..2191401 - 189 WP_014471981.1 hypothetical protein -
LL3_RS10905 () 2191433..2191825 - 393 WP_014470175.1 hypothetical protein -
LL3_RS10910 () 2191858..2192052 - 195 WP_014471982.1 hypothetical protein -
LL3_RS10915 () 2192101..2192358 - 258 WP_026113712.1 hypothetical protein -
LL3_RS10930 () 2192738..2193469 - 732 Protein_2157 hypothetical protein -
LL3_RS10935 () 2193486..2193722 - 237 WP_014471986.1 hypothetical protein -
LL3_RS10940 () 2193763..2194281 - 519 WP_014471987.1 DUF262 domain-containing protein -
LL3_RS21220 () 2194278..2194448 - 171 WP_014471988.1 hypothetical protein -
LL3_RS10945 () 2194445..2194849 - 405 WP_014471989.1 hypothetical protein -
LL3_RS10950 () 2194846..2195046 - 201 WP_014471990.1 hypothetical protein -
LL3_RS10960 () 2195493..2195738 - 246 WP_020954128.1 hypothetical protein -
LL3_RS10965 () 2195813..2196112 - 300 WP_014471993.1 hypothetical protein -
LL3_RS10970 () 2196277..2196498 + 222 WP_014471994.1 helix-turn-helix transcriptional regulator -
LL3_RS10975 () 2196720..2197703 - 984 WP_014471995.1 hypothetical protein ; Integrase Integrase
LL3_RS10980 () 2197724..2199073 - 1350 WP_014471996.1 hypothetical protein -
LL3_RS10985 () 2199150..2200208 - 1059 WP_014471997.1 Tyrosine recombinase XerC ; Integrase Integrase
LL3_RS21450 () 2200218..2200382 - 165 WP_014471998.1 hypothetical protein -
LL3_RS10990 () 2200421..2200651 - 231 WP_014471999.1 hypothetical protein -
LL3_RS10995 () 2200666..2200878 - 213 WP_014472000.1 hypothetical protein -
LL3_RS21455 () 2201027..2201182 - 156 WP_014472001.1 hypothetical protein -
LL3_RS21060 () 2201310..2201441 - 132 WP_014472002.1 lysogeny pheromone AimP family peptide -
LL3_RS11000 () 2201471..2202610 - 1140 WP_014472003.1 AimR family lysis-lysogeny pheromone receptor -
LL3_RS11005 () 2202778..2204175 - 1398 WP_014472004.1 hypothetical protein -
LL3_RS21065 () 2204342..2204473 - 132 WP_014472005.1 hypothetical protein -
LL3_RS11010 () 2204485..2204700 - 216 WP_041915567.1 hypothetical protein -
LL3_RS11015 () 2204703..2204954 - 252 WP_014472006.1 hypothetical protein -
LL3_RS11020 () 2205025..2205207 + 183 WP_041915568.1 hypothetical protein -
LL3_RS11025 () 2205218..2205502 - 285 WP_014472007.1 XRE family transcriptional regulator -
LL3_RS11030 () 2205780..2206262 - 483 WP_014472008.1 hypothetical protein -
LL3_RS11035 () 2206295..2206717 - 423 WP_014472009.1 hypothetical protein -
LL3_RS11040 () 2206727..2206963 - 237 WP_014472010.1 hypothetical protein -
LL3_RS11045 () 2207002..2207379 - 378 WP_014472011.1 hypothetical protein -
LL3_RS11050 () 2207411..2207602 - 192 WP_014470138.1 hypothetical protein -
LL3_RS11055 () 2207719..2207922 - 204 WP_014470137.1 helix-turn-helix transcriptional regulator -
LL3_RS11060 () 2208016..2208453 - 438 WP_014470136.1 hypothetical protein -
LL3_RS11065 () 2208759..2209850 + 1092 WP_014470135.1 acyltransferase -
LL3_RS11070 () 2209925..2210302 - 378 WP_041915569.1 UPF0715 family protein -
LL3_RS11075 () 2210400..2210948 - 549 WP_014470133.1 hypothetical protein -
LL3_RS11080 () 2211139..2211561 - 423 WP_014470131.1 hypothetical protein -
LL3_RS11085 () 2211745..2212497 - 753 WP_014472013.1 phage antirepressor KilAC domain-containing protein -
LL3_RS11090 () 2212720..2214516 - 1797 WP_014472014.1 ATP-dependent helicase -
LL3_RS11095 () 2214518..2215120 - 603 WP_014472015.1 hypothetical protein -
LL3_RS11100 () 2215122..2216042 - 921 WP_014472016.1 hypothetical protein -
LL3_RS11105 () 2216047..2216835 - 789 WP_041915570.1 hypothetical protein -
LL3_RS11110 () 2217178..2218395 - 1218 WP_014472019.1 hypothetical protein -
LL3_RS11115 () 2218476..2218715 - 240 WP_014472020.1 hypothetical protein -
LL3_RS11125 () 2219019..2219198 - 180 WP_041915572.1 hypothetical protein -
- () 2219145..2219234 + 90 NuclAT_1 - -
- () 2219145..2219234 + 90 NuclAT_1 - -
- () 2219145..2219234 + 90 NuclAT_1 - -
- () 2219145..2219234 + 90 NuclAT_1 - -
LL3_RS11130 () 2220147..2221259 - 1113 WP_014472021.1 cell division protein FtsZ -
LL3_RS11135 () 2221259..2221543 - 285 WP_041915573.1 hypothetical protein -
LL3_RS11140 () 2221722..2221958 + 237 WP_020954165.1 helix-turn-helix domain-containing protein -
LL3_RS11145 () 2222078..2222257 + 180 WP_014417885.1 hypothetical protein -
LL3_RS11150 () 2222298..2224169 + 1872 Protein_2204 hypothetical protein -
LL3_RS11155 () 2224519..2225148 + 630 WP_041915575.1 hypothetical protein -
LL3_RS11160 () 2225409..2225684 + 276 WP_014472022.1 HU family DNA-binding protein -
LL3_RS21070 () 2226266..2226380 + 115 Protein_2207 hypothetical protein -
LL3_RS11170 () 2227641..2227832 + 192 WP_010328101.1 YonK family protein -
LL3_RS11175 () 2227849..2229066 + 1218 WP_014472023.1 hypothetical protein -
LL3_RS11180 () 2229304..2229804 + 501 WP_014470112.1 hypothetical protein -
LL3_RS11185 () 2229914..2230834 + 921 WP_014472024.1 hypothetical protein -
LL3_RS11190 () 2230821..2232590 + 1770 WP_014472025.1 terminase family protein -
LL3_RS11195 () 2232608..2234143 + 1536 WP_014472026.1 hypothetical protein -
LL3_RS11200 () 2234174..2235610 + 1437 WP_014472027.1 hypothetical protein -
LL3_RS11205 () 2235635..2236171 + 537 WP_014472028.1 hypothetical protein -
LL3_RS11210 () 2236209..2237225 + 1017 WP_014472029.1 hypothetical protein -
LL3_RS11215 () 2237260..2237730 + 471 WP_041915576.1 hypothetical protein -
LL3_RS11220 () 2237745..2238140 + 396 WP_014472031.1 hypothetical protein -
LL3_RS11225 () 2238137..2238391 + 255 WP_014472032.1 hypothetical protein -
LL3_RS11230 () 2238375..2239028 + 654 WP_041915577.1 hypothetical protein -
LL3_RS11235 () 2239025..2239531 + 507 WP_014417869.1 hypothetical protein -
LL3_RS11240 () 2239528..2240253 + 726 WP_014472034.1 hypothetical protein -
LL3_RS11245 () 2240292..2241083 + 792 WP_014472035.1 hypothetical protein -
LL3_RS11250 () 2241104..2241571 + 468 WP_014472036.1 hypothetical protein -
LL3_RS11255 () 2241643..2241999 + 357 WP_014470098.1 hypothetical protein -
LL3_RS11260 () 2241999..2243330 + 1332 WP_014472037.1 pyocin knob domain-containing protein -
LL3_RS11265 () 2243344..2243619 + 276 WP_014470096.1 hypothetical protein -
LL3_RS20640 () 2243620..2243772 + 153 WP_014470095.1 XkdX family protein -
LL3_RS11270 () 2243791..2244639 + 849 WP_014472038.1 glycerophosphoryl diester phosphodiesterase -
LL3_RS11275 () 2244722..2245207 + 486 WP_014472039.1 hypothetical protein -
LL3_RS11280 () 2245207..2245623 + 417 WP_014472040.1 hypothetical protein -
LL3_RS11285 () 2245637..2246638 + 1002 WP_014472041.1 Tyrosine recombinase XerC ; Integrase Integrase
LL3_RS11290 () 2246683..2246898 + 216 WP_014472042.1 hypothetical protein -
LL3_RS11295 () 2246978..2247685 - 708 WP_014472043.1 hypothetical protein -
LL3_RS21225 () 2247747..2247905 + 159 WP_014472044.1 hypothetical protein -
LL3_RS11300 () 2247972..2248382 + 411 WP_014472045.1 hypothetical protein -
LL3_RS11305 () 2248454..2249080 + 627 WP_014470085.1 hypothetical protein -
LL3_RS11315 () 2249127..2256233 + 7107 Protein_2238 Murein DD-endopeptidase MepM VF
LL3_RS11320 () 2256278..2257039 + 762 WP_014470084.1 phage tail family protein -
LL3_RS11325 () 2257054..2259687 + 2634 WP_014472046.1 hypothetical protein -
LL3_RS21230 () 2259913..2260080 + 168 WP_014470082.1 hypothetical protein -
LL3_RS11335 () 2260174..2260989 + 816 WP_014472047.1 hypothetical protein -
LL3_RS11340 () 2261003..2263552 + 2550 WP_014470080.1 hypothetical protein -
LL3_RS21075 () 2263725..2264183 + 459 Protein_2244 N-acetylmuramoyl-L-alanine amidase -
LL3_RS21085 () 2264604..2264828 + 225 Protein_2245 N-acetylmuramoyl-L-alanine amidase -
LL3_RS21090 () 2264829..2265107 + 279 Protein_2246 N-acetylmuramoyl-L-alanine amidase family protein -
LL3_RS11350 () 2265221..2265613 + 393 WP_014472049.1 hypothetical protein -
LL3_RS11355 () 2265634..2265885 + 252 WP_014472050.1 phage holin -
LL3_RS11365 () 2266223..2266528 + 306 WP_099762739.1 ISNCY family transposase KIS Transposase
LL3_RS11370 () 2266680..2267840 + 1161 WP_014472052.1 tetratricopeptide repeat protein -
LL3_RS11375 () 2268004..2268618 - 615 WP_014472053.1 DNA polymerase -
LL3_RS11380 () 2268659..2270470 - 1812 WP_014472054.1 reverse transcriptase/maturase family protein -
LL3_RS11385 () 2271022..2271732 - 711 WP_014472055.1 lesion bypass phage DNA polymerase -
LL3_RS11390 () 2271725..2272057 - 333 WP_014472056.1 YolD-like family protein -
LL3_RS11395 () 2272275..2273033 - 759 WP_080558536.1 sporulation protein YunB -
LL3_RS11400 () 2273162..2273365 - 204 WP_041915578.1 hypothetical protein -
LL3_RS21095 () 2273615..2273731 + 117 WP_009967548.1 type I toxin-antitoxin system toxin BsrG Toxin Detail
- () 2273726..2273865 - 140 NuclAT_0 - Antitoxin Detail
- () 2273726..2273865 - 140 NuclAT_0 - Antitoxin Detail
- () 2273726..2273865 - 140 NuclAT_0 - Antitoxin Detail
- () 2273726..2273865 - 140 NuclAT_0 - Antitoxin Detail
LL3_RS11405 () 2274039..2274599 - 561 WP_014472060.1 SMI1/KNR4 family protein -
LL3_RS11410 () 2274599..2276353 - 1755 WP_014472061.1 hypothetical protein -
LL3_RS11415 () 2276525..2277508 + 984 WP_014472062.1 thermonuclease family protein -
LL3_RS11420 () 2277759..2279300 + 1542 WP_014472063.1 hypothetical protein ; Integrase Integrase
LL3_RS11425 () 2279320..2279718 - 399 Protein_2262 purine permease -
LL3_RS11430 () 2279715..2280299 - 585 WP_013352628.1 xanthine phosphoribosyltransferase -
LL3_RS11435 () 2280629..2282131 - 1503 WP_013352629.1 carboxypeptidase M32 -
LL3_RS11440 () 2282243..2284162 - 1920 WP_013352630.1 ATP-dependent DNA helicase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance