MGE detailed information
MGE type: Prophage MGE length: 15070 bp
Accession: NC_017173 Location: 2799719..2814788 Organism: Clostridium difficile CF5 Replicon: chromosome
Accession: NC_017173 Location: 2799719..2814788 Organism: Clostridium difficile CF5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDCF5_RS12865 () | 2794915..2796132 | - | 1218 | WP_003431029.1 | threonine ammonia-lyase | - |
| CDCF5_RS12870 () | 2796790..2798418 | + | 1629 | WP_003431030.1 | aspartate 4-decarboxylase | - |
| CDCF5_RS12875 () | 2798539..2799534 | + | 996 | WP_003431031.1 | asparaginase | - |
| CDCF5_RS12880 () | 2799719..2800102 | - | 384 | WP_003431032.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDCF5_RS12885 () | 2800482..2800658 | + | 177 | WP_003431033.1 | hypothetical protein | - |
| CDCF5_RS12890 () | 2800884..2801084 | + | 201 | WP_003431034.1 | cold-shock protein | - |
| CDCF5_RS12895 () | 2801515..2802852 | + | 1338 | WP_003431035.1 | ATP-binding protein | - |
| CDCF5_RS12900 () | 2802895..2803476 | + | 582 | WP_003431036.1 | accessory gene regulator B family protein | - |
| CDCF5_RS12905 () | 2803494..2803655 | + | 162 | WP_003431037.1 | cyclic lactone autoinducer peptide | - |
| CDCF5_RS12910 () | 2803677..2804474 | - | 798 | WP_003431038.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CDCF5_RS12915 () | 2804471..2804731 | - | 261 | WP_003431039.1 | phage holin family protein | - |
| - () | 2805681..2805815 | + | 135 | NuclAT_2 | - | Antitoxin Detail |
| CDCF5_RS12920 () | 2805732..2805890 | - | 159 | WP_003431040.1 | hypothetical protein | Toxin Detail |
| CDCF5_RS12925 () | 2806248..2807618 | - | 1371 | WP_003431041.1 | Lysine exporter LysO | VF |
| CDCF5_RS12930 () | 2807900..2807998 | + | 99 | Protein_2512 | Arm DNA-binding domain-containing protein | - |
| CDCF5_RS12935 () | 2808017..2808439 | + | 423 | Protein_2513 | hypothetical protein | - |
| CDCF5_RS12940 () | 2808757..2808942 | + | 186 | WP_107615967.1 | tyrosine-type recombinase/integrase | - |
| CDCF5_RS12945 () | 2809305..2809385 | - | 81 | Protein_2515 | VOC family protein | - |
| CDCF5_RS12950 () | 2809425..2810093 | - | 669 | WP_003431044.1 | VanZ family protein | - |
| CDCF5_RS12955 () | 2810192..2810575 | - | 384 | WP_071599195.1 | helix-turn-helix transcriptional regulator | - |
| CDCF5_RS12960 () | 2810975..2813395 | - | 2421 | WP_003431046.1 | leucine--tRNA ligase | - |
| CDCF5_RS12965 () | 2813749..2814099 | - | 351 | WP_003416416.1 | ribosome silencing factor | - |
| CDCF5_RS12970 () | 2814216..2814788 | - | 573 | WP_003431048.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| CDCF5_RS12975 () | 2814789..2815478 | - | 690 | WP_003416411.1 | nicotinate-nucleotide adenylyltransferase | - |
| CDCF5_RS12980 () | 2815754..2816392 | + | 639 | WP_003431050.1 | recombination regulator RecX | - |
| CDCF5_RS12985 () | 2816545..2818548 | + | 2004 | WP_003431052.1 | alpha amylase C-terminal domain-containing protein | - |
| CDCF5_RS12990 () | 2818722..2819363 | + | 642 | WP_003431054.1 | TetR/AcrR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|