MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 191411 bp
Accession: NC_017136 Location: 1..191411 Organism: Acetobacter pasteurianus IFO 3283-12 Replicon: plasmid pAPA12-014
Accession: NC_017136 Location: 1..191411 Organism: Acetobacter pasteurianus IFO 3283-12 Replicon: plasmid pAPA12-014
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APA12_RS13650 () | 648..986 | - | 339 | WP_012813093.1 | UvrD-helicase domain-containing protein | - |
| APA12_RS13655 () | 1104..2126 | + | 1023 | WP_041247965.1 | IS110 family transposase | - |
| APA12_RS13660 () | 2670..3710 | - | 1041 | WP_012813095.1 | IS110 family transposase | - |
| APA12_RS13665 () | 3743..4186 | - | 444 | WP_012813096.1 | recombinase family protein | - |
| APA12_RS16130 () | 4422..4739 | + | 318 | Protein_5 | transposase | - |
| APA12_RS13675 () | 4985..6463 | + | 1479 | WP_012813098.1 | mannitol dehydrogenase family protein | - |
| APA12_RS13680 () | 6536..7249 | - | 714 | WP_012813099.1 | HAD family phosphatase | - |
| APA12_RS13685 () | 7955..8338 | + | 384 | WP_012813100.1 | DUF2513 domain-containing protein | - |
| APA12_RS16640 () | 8629..9069 | - | 441 | WP_157666435.1 | hypothetical protein | - |
| APA12_RS13695 () | 9054..13013 | + | 3960 | WP_012813102.1 | DNA damage-inducible protein | - |
| APA12_RS13700 () | 13598..13942 | + | 345 | WP_041633164.1 | hypothetical protein | - |
| APA12_RS13705 () | 14000..15385 | + | 1386 | WP_082179774.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS13710 () | 15660..16088 | + | 429 | WP_012813104.1 | hypothetical protein | - |
| APA12_RS13715 () | 16305..17675 | - | 1371 | WP_012813105.1 | hypothetical protein | - |
| APA12_RS13725 () | 18586..19971 | - | 1386 | WP_012813107.1 | IS1380 family transposase | - |
| APA12_RS13730 () | 20180..20638 | + | 459 | WP_012813108.1 | hypothetical protein | - |
| APA12_RS13740 () | 20704..21791 | + | 1088 | WP_148194248.1 | IS3 family transposase | - |
| APA12_RS13745 () | 21852..22514 | + | 663 | WP_012813110.1 | hypothetical protein | - |
| APA12_RS13750 () | 22528..24903 | + | 2376 | WP_012813111.1 | DotA/TraY family protein | - |
| APA12_RS13755 () | 24921..25322 | + | 402 | WP_012813112.1 | hypothetical protein | - |
| APA12_RS13760 () | 25729..26349 | - | 621 | WP_012813113.1 | hypothetical protein | - |
| APA12_RS13765 () | 26346..27353 | - | 1008 | WP_012813114.1 | thiol:disulfide interchange protein | - |
| APA12_RS13770 () | 28241..29626 | + | 1386 | WP_012812390.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS13775 () | 29841..30338 | + | 498 | WP_012813116.1 | tyrosine-type recombinase/integrase | - |
| APA12_RS13780 () | 30763..31686 | + | 924 | WP_012813117.1 | plasmid replication initiator RepA | - |
| APA12_RS13785 () | 31897..32952 | + | 1056 | WP_012813118.1 | DUF1870 family protein | - |
| APA12_RS13790 () | 32939..33811 | + | 873 | WP_012813119.1 | ParB/RepB/Spo0J family partition protein | - |
| APA12_RS13795 () | 34274..36940 | + | 2667 | Protein_28 | lactate dehydrogenase | - |
| APA12_RS13800 () | 37006..37940 | + | 935 | Protein_29 | IS5 family transposase | - |
| APA12_RS13805 () | 38054..38332 | + | 279 | WP_012813123.1 | HU family DNA-binding protein | - |
| APA12_RS13810 () | 38341..38643 | + | 303 | WP_041633166.1 | WGR domain-containing protein | - |
| APA12_RS13815 () | 38729..39037 | + | 309 | WP_012813124.1 | hypothetical protein | - |
| APA12_RS13820 () | 39034..39630 | + | 597 | WP_012813125.1 | relaxase domain-containing protein | - |
| APA12_RS13825 () | 39688..40116 | + | 429 | Protein_34 | transposase | - |
| APA12_RS13830 () | 40207..41592 | + | 1386 | WP_012813126.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS13835 () | 41876..43261 | + | 1386 | WP_012812390.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS13840 () | 43623..44225 | - | 603 | Protein_37 | IS5/IS1182 family transposase | - |
| APA12_RS13845 () | 44576..45169 | + | 594 | WP_012813128.1 | TetR/AcrR family transcriptional regulator | - |
| APA12_RS13850 () | 45257..46414 | + | 1158 | WP_003631147.1 | iron-containing alcohol dehydrogenase | - |
| APA12_RS13855 () | 46499..47890 | + | 1392 | WP_003631146.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| APA12_RS13865 () | 48137..49096 | - | 960 | Protein_41 | IS481 family transposase | - |
| APA12_RS13870 () | 49290..50540 | - | 1251 | WP_012812328.1 | IS701-like element IS1452 family transposase | - |
| APA12_RS13875 () | 50854..51303 | - | 450 | WP_012813131.1 | phosphate-starvation-inducible PsiE family protein | - |
| APA12_RS13880 () | 51340..52662 | - | 1323 | WP_012813132.1 | outer membrane beta-barrel protein | - |
| APA12_RS16160 () | 52938..53027 | + | 90 | WP_082179775.1 | potassium-transporting ATPase subunit F | - |
| APA12_RS13885 () | 53030..54736 | + | 1707 | WP_012813133.1 | potassium-transporting ATPase subunit KdpA | - |
| APA12_RS13890 () | 54751..56859 | + | 2109 | WP_012813134.1 | potassium-transporting ATPase subunit KdpB | - |
| APA12_RS13895 () | 56870..57493 | + | 624 | WP_012813135.1 | potassium-transporting ATPase subunit KdpC | - |
| APA12_RS13900 () | 57493..60180 | + | 2688 | WP_012813136.1 | sensor histidine kinase KdpD | - |
| APA12_RS13905 () | 60177..60860 | + | 684 | WP_012813137.1 | response regulator transcription factor | - |
| APA12_RS13910 () | 61118..62380 | + | 1263 | WP_012813138.1 | sodium:proton antiporter | - |
| APA12_RS13915 () | 62685..63407 | - | 723 | WP_012813139.1 | hypothetical protein | - |
| APA12_RS13920 () | 63579..64964 | - | 1386 | WP_082179776.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS13925 () | 65449..66411 | + | 963 | WP_012813141.1 | AraC family transcriptional regulator | - |
| APA12_RS13930 () | 66401..67231 | - | 831 | WP_012813142.1 | sulfotransferase | - |
| APA12_RS13935 () | 67776..69749 | + | 1974 | WP_012813143.1 | acyltransferase family protein | - |
| APA12_RS13940 () | 70101..71186 | + | 1086 | WP_012813144.1 | winged helix-turn-helix domain-containing protein | - |
| APA12_RS13945 () | 71199..72245 | - | 1047 | WP_012813145.1 | Fic family protein | - |
| APA12_RS13950 () | 72242..72598 | - | 357 | WP_012813146.1 | hypothetical protein | - |
| APA12_RS13955 () | 72690..74006 | - | 1317 | WP_012813147.1 | replication protein C | - |
| APA12_RS16175 () | 74774..74965 | - | 192 | Protein_61 | DUF2312 domain-containing protein | - |
| APA12_RS13960 () | 75147..76532 | - | 1386 | WP_012813149.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS13965 () | 76940..79408 | + | 2469 | WP_012813150.1 | TonB-dependent receptor | - |
| APA12_RS13970 () | 79421..80530 | + | 1110 | WP_012813151.1 | glycerophosphodiester phosphodiesterase | - |
| APA12_RS13975 () | 80708..81583 | - | 876 | WP_012813152.1 | EamA family transporter | - |
| APA12_RS13980 () | 81776..82666 | + | 891 | WP_012813153.1 | AraC family transcriptional regulator | - |
| APA12_RS13985 () | 82907..83329 | - | 423 | WP_041633201.1 | CrcB family protein | - |
| APA12_RS13990 () | 83305..83661 | - | 357 | Protein_68 | transposase | - |
| APA12_RS16645 () | 83755..83901 | + | 147 | Protein_69 | hypothetical protein | - |
| APA12_RS13995 () | 84056..84187 | + | 132 | Protein_70 | S24 family peptidase | - |
| APA12_RS14000 () | 84275..85209 | + | 935 | Protein_71 | IS5 family transposase | - |
| APA12_RS14005 () | 85750..86364 | + | 615 | WP_012813156.1 | hypothetical protein | - |
| APA12_RS16500 () | 86342..86605 | - | 264 | WP_124306776.1 | hypothetical protein | - |
| APA12_RS14015 () | 86798..87433 | + | 636 | WP_012813157.1 | hypothetical protein | - |
| APA12_RS16180 () | 87388..87966 | - | 579 | WP_157666438.1 | NERD domain-containing protein | - |
| APA12_RS14020 () | 88537..89922 | - | 1386 | WP_012813158.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14025 () | 90014..90346 | - | 333 | Protein_77 | transposase | - |
| APA12_RS16870 () | 90984..91063 | - | 80 | Protein_78 | IS5/IS1182 family transposase | - |
| APA12_RS14030 () | 91196..91528 | + | 333 | WP_012813160.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| APA12_RS14035 () | 91531..92022 | + | 492 | WP_012813161.1 | type II toxin-antitoxin system YhaV family toxin | - |
| APA12_RS14040 () | 92457..92729 | - | 273 | WP_012813162.1 | hypothetical protein | - |
| APA12_RS14045 () | 93103..94488 | + | 1386 | WP_012812390.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14050 () | 94900..95696 | + | 797 | Protein_83 | IS5 family transposase | - |
| APA12_RS14055 () | 96051..97424 | - | 1374 | WP_012813165.1 | Nramp family divalent metal transporter | - |
| APA12_RS14060 () | 97610..98125 | + | 516 | WP_012813166.1 | manganese-binding transcriptional regulator MntR | - |
| APA12_RS14065 () | 98112..99842 | - | 1731 | WP_012813167.1 | ABC transporter ATP-binding protein/permease | - |
| APA12_RS14070 () | 100393..101985 | + | 1593 | WP_012813168.1 | carbohydrate porin | - |
| APA12_RS14075 () | 102131..102349 | + | 219 | WP_003627697.1 | CbtB-domain containing protein | - |
| APA12_RS14080 () | 102373..103107 | + | 735 | WP_012813169.1 | CbtA family protein | - |
| APA12_RS14085 () | 103910..104287 | + | 378 | WP_012813170.1 | hypothetical protein | - |
| APA12_RS16185 () | 104772..105038 | + | 267 | WP_082179784.1 | hypothetical protein | - |
| APA12_RS14090 () | 105038..105397 | + | 360 | WP_012813171.1 | hypothetical protein | - |
| APA12_RS14095 () | 105548..106474 | - | 927 | Protein_93 | Rieske 2Fe-2S domain-containing protein | - |
| APA12_RS14110 () | 107412..108662 | - | 1251 | WP_012812328.1 | IS701-like element IS1452 family transposase | - |
| APA12_RS14115 () | 108827..109528 | - | 702 | Protein_96 | IS5-like element ISGdi2 family transposase | - |
| APA12_RS16510 () | 110831..110959 | - | 129 | Protein_98 | IS5/IS1182 family transposase | - |
| APA12_RS14130 () | 111144..112100 | + | 957 | WP_012813177.1 | alpha/beta hydrolase | - |
| APA12_RS14135 () | 112152..112394 | - | 243 | WP_012813178.1 | hypothetical protein | - |
| APA12_RS14140 () | 112503..113582 | + | 1080 | WP_012813179.1 | IS5 family transposase | - |
| APA12_RS14145 () | 113591..113926 | + | 336 | WP_012813180.1 | hypothetical protein | - |
| APA12_RS14150 () | 114223..116937 | + | 2715 | WP_012813181.1 | CRISPR-associated helicase/endonuclease Cas3 | - |
| APA12_RS14155 () | 116999..118654 | + | 1656 | WP_012813182.1 | type I-E CRISPR-associated protein Cse1/CasA | - |
| APA12_RS14160 () | 118654..119214 | + | 561 | WP_012813183.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| APA12_RS14165 () | 119235..120293 | + | 1059 | WP_012813184.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| APA12_RS14170 () | 120299..121078 | + | 780 | WP_012813185.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| APA12_RS14175 () | 121078..121767 | + | 690 | WP_012813186.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| APA12_RS14180 () | 121780..122739 | + | 960 | WP_012813187.1 | type I-E CRISPR-associated endonuclease Cas1e | - |
| APA12_RS14185 () | 122720..123061 | + | 342 | WP_012813188.1 | type I-E CRISPR-associated endoribonuclease Cas2 | - |
| APA12_RS14190 () | 124581..125540 | - | 960 | WP_041633306.1 | IS481 family transposase | - |
| APA12_RS14195 () | 125598..125978 | - | 381 | WP_003627483.1 | hypothetical protein | - |
| APA12_RS14200 () | 125966..126250 | - | 285 | WP_035362983.1 | hypothetical protein | - |
| APA12_RS14205 () | 126560..127042 | + | 483 | WP_012813190.1 | hypothetical protein | - |
| APA12_RS14220 () | 128688..129137 | - | 450 | WP_012813192.1 | phosphate-starvation-inducible PsiE family protein | - |
| APA12_RS14225 () | 129274..129459 | + | 186 | Protein_117 | IS5/IS1182 family transposase | - |
| APA12_RS14230 () | 129647..131032 | - | 1386 | WP_012812390.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14235 () | 131098..131679 | + | 582 | WP_012813194.1 | group III truncated hemoglobin | - |
| APA12_RS14240 () | 131707..132006 | + | 300 | WP_012813195.1 | DUF1971 domain-containing protein | - |
| APA12_RS14245 () | 132145..132978 | - | 834 | Protein_121 | IS5 family transposase | - |
| APA12_RS14260 () | 134255..134617 | + | 363 | WP_012813198.1 | hypothetical protein | - |
| APA12_RS14265 () | 134831..135091 | + | 261 | WP_003618686.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| APA12_RS14270 () | 135088..135381 | + | 294 | WP_003618711.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| APA12_RS14275 () | 135583..136566 | - | 984 | WP_012813200.1 | Abi family protein | - |
| APA12_RS14280 () | 136824..138623 | - | 1800 | WP_012813201.1 | oleate hydratase | - |
| APA12_RS14285 () | 138669..139256 | - | 588 | Protein_128 | DUF1275 domain-containing protein | - |
| APA12_RS14290 () | 139242..139487 | + | 246 | Protein_129 | hypothetical protein | - |
| APA12_RS14295 () | 139851..140558 | - | 708 | Protein_130 | transposase | - |
| APA12_RS14300 () | 140749..142134 | - | 1386 | WP_012813204.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14305 () | 142228..142599 | - | 372 | Protein_132 | transposase | - |
| APA12_RS14310 () | 142731..143933 | - | 1203 | WP_006117547.1 | porin | - |
| APA12_RS16525 () | 143976..144218 | - | 243 | WP_124307076.1 | hypothetical protein | - |
| APA12_RS14315 () | 144558..145943 | + | 1386 | WP_012813149.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS16880 () | 146129..146371 | + | 243 | Protein_136 | IS5/IS1182 family transposase | - |
| APA12_RS14320 () | 146654..148876 | - | 2223 | WP_012813206.1 | TonB-dependent receptor | - |
| APA12_RS14325 () | 148953..149483 | - | 531 | WP_012813207.1 | hypothetical protein | - |
| APA12_RS14330 () | 149812..150804 | + | 993 | WP_012813208.1 | TonB family protein | - |
| APA12_RS14335 () | 150850..152100 | + | 1251 | WP_012812328.1 | IS701-like element IS1452 family transposase | - |
| APA12_RS14340 () | 152463..153542 | + | 1080 | WP_006115564.1 | IS5 family transposase | - |
| APA12_RS16215 () | 153773..153991 | - | 219 | WP_170315285.1 | WGR domain-containing protein | - |
| APA12_RS14345 () | 154070..154348 | - | 279 | WP_006115563.1 | HU family DNA-binding protein | - |
| APA12_RS16680 () | 155790..155975 | - | 186 | WP_041633309.1 | hypothetical protein | - |
| APA12_RS14365 () | 156060..156875 | + | 816 | WP_012813210.1 | hypothetical protein | - |
| APA12_RS14370 () | 156888..157292 | + | 405 | WP_006115557.1 | hypothetical protein | - |
| APA12_RS14375 () | 157349..157669 | - | 321 | WP_012813211.1 | hypothetical protein | - |
| APA12_RS14380 () | 157699..157899 | - | 201 | WP_012813212.1 | hypothetical protein | - |
| APA12_RS14385 () | 157956..158285 | - | 330 | WP_012813213.1 | endoribonuclease MazF | Toxin Detail |
| APA12_RS14390 () | 158287..158541 | - | 255 | WP_006115554.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| APA12_RS14395 () | 158640..158948 | - | 309 | WP_006115553.1 | PIN domain-containing protein | Toxin Detail |
| APA12_RS14400 () | 158945..159217 | - | 273 | WP_006115552.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| APA12_RS14405 () | 159547..159918 | - | 372 | Protein_154 | integrase core domain-containing protein | - |
| APA12_RS14410 () | 160012..161397 | + | 1386 | WP_012813126.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS16230 () | 161529..161980 | + | 452 | Protein_156 | recombinase family protein | - |
| APA12_RS14415 () | 162294..163067 | - | 774 | WP_003631418.1 | TSUP family transporter | - |
| APA12_RS14420 () | 163259..163843 | + | 585 | Protein_158 | IS701 family transposase | - |
| APA12_RS14425 () | 164018..165403 | - | 1386 | WP_012812390.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14430 () | 165488..165925 | + | 438 | Protein_160 | SDR family oxidoreductase | - |
| APA12_RS14435 () | 165966..167738 | - | 1773 | WP_012813217.1 | AMP-binding protein | - |
| APA12_RS14440 () | 167753..169000 | - | 1248 | WP_035366434.1 | MSMEG_0569 family flavin-dependent oxidoreductase | - |
| APA12_RS14445 () | 169017..169304 | - | 288 | WP_020936672.1 | MSMEG_0570 family nitrogen starvation response protein | - |
| APA12_RS14450 () | 169292..170470 | - | 1179 | WP_012813219.1 | MSMEG_0565 family glycosyltransferase | - |
| APA12_RS14455 () | 170467..171438 | - | 972 | WP_003630850.1 | sll0787 family AIR synthase-like protein | - |
| APA12_RS14460 () | 171435..171998 | - | 564 | WP_012813220.1 | GNAT family N-acetyltransferase | - |
| APA12_RS14465 () | 171995..173104 | - | 1110 | WP_012813221.1 | MSMEG_0568 family radical SAM protein | - |
| APA12_RS14470 () | 173101..174075 | - | 975 | WP_012813222.1 | Nit6803 family nitriliase | - |
| APA12_RS14475 () | 174100..174582 | - | 483 | WP_012813223.1 | MSMEG_0572 family nitrogen starvation response protein | - |
| APA12_RS14480 () | 174923..176326 | - | 1404 | WP_012813224.1 | PLP-dependent aminotransferase family protein | - |
| APA12_RS14485 () | 176761..177384 | + | 624 | WP_012813225.1 | alpha/beta hydrolase | - |
| APA12_RS14490 () | 177388..178266 | - | 879 | WP_012813226.1 | LysR family transcriptional regulator | - |
| APA12_RS14495 () | 178470..179990 | + | 1521 | WP_041633310.1 | MFS transporter | - |
| APA12_RS16240 () | 180314..180523 | - | 210 | Protein_174 | IS701 family transposase | - |
| APA12_RS14500 () | 180620..182005 | + | 1386 | WP_012813229.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14505 () | 182301..183686 | + | 1386 | WP_012813230.1 | IS1380-like element IS1380A family transposase | - |
| APA12_RS14510 () | 183829..184269 | - | 441 | WP_082179782.1 | DNA helicase II | - |
| APA12_RS14515 () | 184383..186602 | - | 2220 | WP_012813232.1 | ATP-dependent RecD-like DNA helicase | - |
| APA12_RS14520 () | 186599..188824 | - | 2226 | WP_012813233.1 | site-specific integrase | - |
| APA12_RS16245 () | 188829..189311 | - | 483 | Protein_180 | site-specific integrase | - |
| APA12_RS16250 () | 189409..189994 | + | 586 | Protein_181 | IS5 family transposase | - |
| APA12_RS14540 () | 190076..190833 | + | 758 | Protein_182 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|