MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93877 bp
Accession: NC_017054 Location: 1..93877 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 798 Replicon: plasmid p798_93
Accession: NC_017054 Location: 1..93877 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 798 Replicon: plasmid p798_93
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UMN798_RS23605 () | 95..349 | + | 255 | Protein_0 | hypothetical protein | - |
| UMN798_RS23610 () | 611..1054 | + | 444 | WP_010999935.1 | phospholipase | - |
| UMN798_RS23615 () | 1233..1499 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| UMN798_RS23625 () | 1749..1826 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| UMN798_RS23630 () | 1807..2688 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| UMN798_RS25680 () | 3548..3769 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| UMN798_RS23635 () | 3866..4624 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| UMN798_RS23640 () | 4891..5448 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| UMN798_RS23645 () | 5538..6437 | - | 900 | WP_000990048.1 | YjiK family protein | - |
| UMN798_RS26565 () | 6434..6580 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| UMN798_RS23650 () | 6570..7223 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| UMN798_RS23655 () | 7468..7818 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| UMN798_RS23660 () | 7803..8015 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| UMN798_RS23665 () | 8447..9322 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| UMN798_RS23670 () | 9575..10132 | - | 558 | WP_010999940.1 | membrane protein | - |
| UMN798_RS23675 () | 10147..10839 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| UMN798_RS23680 () | 10832..13240 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| UMN798_RS23685 () | 13468..13986 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| UMN798_RS23690 () | 14261..14563 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| UMN798_RS23695 () | 15281..15662 | + | 382 | Protein_19 | YgiW/YdeI family stress tolerance OB fold protein | - |
| UMN798_RS26475 () | 15831..16275 | + | 445 | Protein_20 | site-specific integrase | - |
| UMN798_RS23705 () | 16534..17523 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| UMN798_RS26190 () | 18017..18313 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| UMN798_RS23715 () | 18797..19318 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| UMN798_RS23720 () | 19994..20212 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| UMN798_RS23725 () | 20214..20519 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| UMN798_RS23730 () | 20521..20811 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| UMN798_RS23735 () | 20808..21329 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| UMN798_RS23740 () | 21364..22146 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| UMN798_RS23745 () | 22155..22868 | + | 714 | Protein_29 | EAL domain-containing protein | - |
| UMN798_RS23750 () | 22872..23381 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| UMN798_RS23755 () | 23375..23860 | + | 486 | WP_000905606.1 | membrane protein | - |
| UMN798_RS26480 () | 24137..24433 | - | 297 | WP_128189354.1 | hypothetical protein | - |
| UMN798_RS23765 () | 24589..25149 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| UMN798_RS23770 () | 25216..25566 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| UMN798_RS25705 () | 25623..26047 | + | 425 | Protein_35 | IS200/IS605 family transposase | - |
| UMN798_RS23780 () | 26174..26824 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| UMN798_RS23785 () | 27085..27810 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| UMN798_RS23790 () | 28091..29866 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| UMN798_RS26570 () | 29918..30085 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| UMN798_RS23795 () | 30048..30815 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| UMN798_RS23800 () | 30989..31153 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| UMN798_RS23805 () | 31327..32220 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| UMN798_RS23810 () | 32828..33865 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| UMN798_RS23815 () | 34054..35079 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| UMN798_RS23820 () | 35012..36676 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| UMN798_RS23825 () | 36660..37220 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| UMN798_RS23830 () | 37427..38167 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| UMN798_RS23835 () | 38822..39310 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| UMN798_RS23840 () | 39569..40684 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| UMN798_RS23845 () | 40770..41186 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| UMN798_RS23850 () | 41370..41705 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| UMN798_RS23855 () | 41762..42328 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| UMN798_RS23860 () | 42360..43301 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| UMN798_RS23865 () | 43716..44921 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| UMN798_RS23870 () | 44921..45895 | + | 975 | WP_000064272.1 | ParB/RepB/Spo0J family partition protein | - |
| UMN798_RS23875 () | 45977..47250 | - | 1274 | Protein_56 | Y-family DNA polymerase | - |
| UMN798_RS23880 () | 47250..47672 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| UMN798_RS26200 () | 48183..48653 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| UMN798_RS23890 () | 48646..49002 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| UMN798_RS23900 () | 49384..50064 | + | 681 | WP_000088645.1 | DNA methylase | - |
| UMN798_RS23905 () | 50064..50285 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| UMN798_RS23910 () | 50341..50754 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| UMN798_RS23915 () | 50826..51590 | + | 765 | WP_001246548.1 | membrane protein | - |
| UMN798_RS23920 () | 52086..52520 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| UMN798_RS23925 () | 52587..53021 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| UMN798_RS23930 () | 53256..53579 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| UMN798_RS23940 () | 54280..54798 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| UMN798_RS23945 () | 54853..55095 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| UMN798_RS23950 () | 55164..57161 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| UMN798_RS23955 () | 57201..57635 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| UMN798_RS23960 () | 57632..58369 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| UMN798_RS26575 () | 58618..58776 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| UMN798_RS26580 () | 58879..59697 | + | 819 | Protein_73 | DUF945 domain-containing protein | - |
| UMN798_RS23975 () | 60051..60521 | - | 471 | WP_014344446.1 | transglycosylase SLT domain-containing protein | - |
| UMN798_RS23980 () | 60936..61316 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| UMN798_RS23985 () | 61508..62194 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| UMN798_RS25740 () | 62287..62514 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| UMN798_RS23990 () | 62556..62918 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| UMN798_RS23995 () | 62933..63244 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| UMN798_RS24000 () | 63266..63832 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| UMN798_RS24005 () | 63819..64559 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| UMN798_RS24010 () | 64559..65980 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| UMN798_RS24015 () | 65970..66566 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| UMN798_RS24020 () | 66544..66789 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| UMN798_RS24025 () | 66786..67301 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| UMN798_RS24030 () | 67436..67657 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| UMN798_RS24035 () | 67650..68117 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| UMN798_RS24040 () | 68234..68497 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| UMN798_RS24045 () | 68513..71161 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| UMN798_RS24050 () | 71136..71522 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| UMN798_RS24055 () | 71519..72151 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| UMN798_RS24060 () | 72148..73140 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| UMN798_RS24065 () | 73159..73467 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| UMN798_RS24070 () | 73452..74090 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| UMN798_RS24075 () | 74127..74546 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| UMN798_RS24080 () | 74543..76369 | + | 1827 | WP_000827529.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| UMN798_RS24085 () | 76380..76595 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| UMN798_RS24090 () | 76607..77356 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| UMN798_RS24095 () | 77570..77863 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| UMN798_RS24100 () | 77850..78398 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| UMN798_RS24105 () | 78388..79770 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| UMN798_RS24110 () | 79767..82589 | + | 2823 | WP_001007087.1 | conjugal transfer mating pair stabilization protein TraG | - |
| UMN798_RS24115 () | 82605..83098 | + | 494 | Protein_103 | entry exclusion protein | - |
| UMN798_RS24120 () | 83134..83865 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| UMN798_RS24125 () | 84242..86404 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| UMN798_RS24130 () | 86413..86811 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | - |
| UMN798_RS24135 () | 86811..87038 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | - |
| UMN798_RS24140 () | 87120..92377 | + | 5258 | Protein_108 | conjugative transfer relaxase/helicase TraI | - |
| UMN798_RS24145 () | 92397..93137 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| UMN798_RS24150 () | 93192..93755 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|