NC_0170331054919..1236290

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 181372 bp
Accession: NC_017033        Location: 1054919..1236290         Organism: Frateuria aurantia DSM 6220       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FRAAU_RS04685 () 1050351..1051652 + 1302 WP_169314747.1 cation:proton antiporter -
FRAAU_RS17135 () 1052334..1052537 - 204 WP_014402424.1 hypothetical protein -
FRAAU_RS04695 () 1053148..1054167 - 1020 WP_014402425.1 tyrosine-type recombinase/integrase -
FRAAU_RS04700 () 1054169..1054387 - 219 WP_014402426.1 DUF4224 domain-containing protein -
FRAAU_RS04705 () 1054387..1054635 - 249 WP_014402427.1 hypothetical protein -
FRAAU_RS04710 () 1054637..1054864 - 228 WP_041270370.1 hypothetical protein -
FRAAU_RS04715 () 1054857..1055138 - 282 WP_014402428.1 hypothetical protein -
FRAAU_RS04720 () 1055135..1055392 - 258 WP_014402429.1 hypothetical protein -
FRAAU_RS04725 () 1055389..1056072 - 684 WP_014402430.1 HNH endonuclease -
FRAAU_RS04730 () 1056069..1056419 - 351 WP_014402431.1 hypothetical protein -
FRAAU_RS04735 () 1056715..1057197 - 483 WP_169314776.1 single-stranded DNA-binding protein -
FRAAU_RS04740 () 1057194..1057496 - 303 WP_041270371.1 hypothetical protein -
FRAAU_RS04745 () 1057582..1057803 - 222 WP_156803335.1 hypothetical protein -
FRAAU_RS16330 () 1058142..1059326 + 1185 WP_169314748.1 GGDEF domain-containing protein -
FRAAU_RS04755 () 1059393..1059671 + 279 WP_041270372.1 hypothetical protein -
FRAAU_RS04760 () 1060095..1060526 - 432 WP_041270373.1 hypothetical protein -
FRAAU_RS04765 () 1061139..1061330 + 192 WP_014402438.1 hypothetical protein -
FRAAU_RS16815 () 1061396..1061506 + 111 WP_083841220.1 hypothetical protein -
FRAAU_RS04770 () 1061475..1061768 + 294 WP_014402439.1 BrnA antitoxin family protein -
FRAAU_RS04775 () 1061876..1062043 - 168 WP_041270374.1 IS3 family transposase ISKpn40 Transposase
FRAAU_RS17140 () 1061961..1062221 + 261 WP_156803484.1 integrase core domain-containing protein -
FRAAU_RS17145 () 1062409..1062666 + 258 WP_156803336.1 hypothetical protein -
FRAAU_RS17150 () 1062672..1063235 + 564 WP_014402440.1 hypothetical protein -
FRAAU_RS17155 () 1063219..1063665 + 447 WP_156803337.1 hypothetical protein -
FRAAU_RS04780 () 1063880..1064323 - 444 WP_041270375.1 serine hydrolase -
FRAAU_RS16820 () 1064740..1065435 - 696 WP_014402442.1 helix-turn-helix transcriptional regulator -
FRAAU_RS16825 () 1065507..1065731 + 225 WP_083841123.1 hypothetical protein -
FRAAU_RS04795 () 1065731..1065943 + 213 WP_014402443.1 hypothetical protein -
FRAAU_RS04800 () 1066043..1066615 - 573 WP_041270378.1 hypothetical protein -
FRAAU_RS16335 () 1066614..1067204 + 591 WP_052317791.1 hypothetical protein -
FRAAU_RS16340 () 1067201..1068190 + 990 WP_014402446.1 YdaU family protein -
FRAAU_RS04815 () 1068177..1068839 + 663 WP_014402447.1 hypothetical protein -
FRAAU_RS04820 () 1068836..1069036 + 201 WP_014402448.1 hypothetical protein -
FRAAU_RS04825 () 1069033..1069539 + 507 WP_014402449.1 hypothetical protein -
FRAAU_RS04830 () 1069536..1069925 + 390 WP_014402450.1 Ref family protein -
FRAAU_RS04835 () 1070087..1070419 + 333 WP_083841124.1 DUF1364 domain-containing protein -
FRAAU_RS04840 () 1070422..1070799 + 378 WP_014402452.1 VRR-NUC domain-containing protein -
FRAAU_RS04845 () 1071041..1071658 + 618 WP_156803485.1 hypothetical protein -
FRAAU_RS04850 () 1071772..1072077 - 306 WP_014402454.1 putative addiction module antidote protein Antitoxin Detail
FRAAU_RS04855 () 1072058..1072372 - 315 WP_014402455.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
FRAAU_RS04860 () 1072433..1072939 + 507 WP_014402456.1 Rha family transcriptional regulator -
FRAAU_RS04865 () 1073003..1073221 + 219 WP_014402457.1 hypothetical protein -
FRAAU_RS04870 () 1073205..1073681 + 477 WP_014402458.1 lysozyme -
FRAAU_RS04875 () 1073681..1074163 + 483 WP_156803338.1 hypothetical protein -
FRAAU_RS04880 () 1074220..1074501 + 282 WP_156803339.1 hypothetical protein -
FRAAU_RS04885 () 1074715..1075245 + 531 WP_014402461.1 terminase small subunit -
FRAAU_RS04890 () 1075220..1077124 + 1905 WP_014402462.1 phage terminase large subunit family protein -
FRAAU_RS04895 () 1077125..1077361 + 237 WP_014402463.1 hypothetical protein -
FRAAU_RS04900 () 1077361..1078962 + 1602 WP_014402464.1 phage portal protein -
FRAAU_RS04905 () 1078965..1080191 + 1227 WP_156803486.1 S49 family peptidase -
FRAAU_RS04910 () 1080191..1080607 + 417 WP_014402466.1 head decoration protein -
FRAAU_RS04915 () 1080672..1081673 + 1002 WP_014402467.1 major capsid protein -
FRAAU_RS04920 () 1081670..1081981 + 312 WP_041270856.1 hypothetical protein -
FRAAU_RS04925 () 1081978..1082574 + 597 WP_014402469.1 hypothetical protein -
FRAAU_RS04930 () 1082571..1083152 + 582 WP_014402470.1 hypothetical protein -
FRAAU_RS04935 () 1083127..1083714 + 588 WP_014402471.1 phage baseplate assembly protein V -
FRAAU_RS04940 () 1083725..1084081 + 357 WP_014402472.1 hypothetical protein -
FRAAU_RS04945 () 1084081..1084407 + 327 WP_041270858.1 GPW/gp25 family protein -
FRAAU_RS04950 () 1084404..1085288 + 885 WP_014402474.1 baseplate J/gp47 family protein -
FRAAU_RS04955 () 1085281..1085826 + 546 WP_014402475.1 phage tail protein I -
FRAAU_RS16345 () 1085826..1087793 + 1968 WP_014402476.1 hypothetical protein -
FRAAU_RS04965 () 1087794..1088279 + 486 WP_014402477.1 hypothetical protein -
FRAAU_RS04970 () 1088349..1089569 + 1221 WP_014402478.1 phage tail sheath family protein -
FRAAU_RS04975 () 1089579..1090082 + 504 WP_014402479.1 phage major tail tube protein -
FRAAU_RS04980 () 1090092..1090415 + 324 WP_014402480.1 phage tail assembly protein -
FRAAU_RS04985 () 1090522..1092840 + 2319 WP_014402481.1 phage tail tape measure protein -
FRAAU_RS04990 () 1092844..1093686 + 843 WP_014402482.1 phage tail protein -
FRAAU_RS04995 () 1093661..1093867 + 207 WP_014402483.1 tail protein X -
FRAAU_RS05000 () 1093858..1094910 + 1053 WP_014402484.1 phage late control protein -
FRAAU_RS17160 () 1095001..1095438 - 438 WP_156803340.1 hypothetical protein -
FRAAU_RS05010 () 1095731..1096066 - 336 WP_014402485.1 nuclear transport factor 2 family protein -
FRAAU_RS16830 () 1096347..1096763 - 417 WP_014402486.1 helix-turn-helix transcriptional regulator -
FRAAU_RS05015 () 1097022..1097672 + 651 WP_014402487.1 NAD(P)H-binding protein -
FRAAU_RS05020 () 1097672..1099072 + 1401 WP_014402488.1 putative transport protein HsrA VF
FRAAU_RS05030 () 1099715..1100945 + 1231 Protein_988 tyrosine-type recombinase/integrase -
FRAAU_RS05035 () 1101447..1102691 + 1245 WP_052317966.1 diguanylate phosphodiesterase -
FRAAU_RS05045 () 1103172..1104410 + 1239 WP_041270861.1 Blue light- and temperature-regulated antirepressor BluF VF
FRAAU_RS05050 () 1104549..1105592 - 1044 WP_052317796.1 Ferrichrome receptor FcuA VF
FRAAU_RS05055 () 1106070..1106354 - 285 WP_014402492.1 DUF3325 domain-containing protein -
FRAAU_RS05060 () 1106351..1107928 - 1578 WP_083841221.1 PepSY domain-containing protein -
FRAAU_RS05065 () 1107976..1108341 - 366 WP_014402494.1 DUF3649 domain-containing protein -
FRAAU_RS05070 () 1109189..1109929 - 741 WP_156803343.1 FadR family transcriptional regulator -
FRAAU_RS05075 () 1110200..1110457 + 258 WP_014402496.1 hypothetical protein -
FRAAU_RS05080 () 1110828..1113836 - 3009 WP_014402497.1 TonB-dependent receptor -
FRAAU_RS05085 () 1114083..1114271 - 189 WP_014402498.1 hypothetical protein VF
FRAAU_RS16350 () 1114408..1114728 - 321 WP_014402499.1 hypothetical protein -
FRAAU_RS05095 () 1114902..1115321 + 420 WP_014402500.1 NUDIX domain-containing protein -
FRAAU_RS05100 () 1115579..1116541 - 963 WP_014402501.1 threo-3-hydroxy-L-aspartate ammonia-lyase -
FRAAU_RS05105 () 1116841..1117404 - 564 WP_014402502.1 TetR/AcrR family transcriptional regulator -
FRAAU_RS05110 () 1117515..1118714 + 1200 WP_041270386.1 MFS transporter -
FRAAU_RS05115 () 1119100..1119822 - 723 WP_156803487.1 GntR family transcriptional regulator -
FRAAU_RS05120 () 1119904..1120527 - 624 WP_014402505.1 nicotinamide riboside transporter PnuC -
FRAAU_RS05125 () 1120590..1121471 - 882 WP_014402506.1 sulfurtransferase -
FRAAU_RS05130 () 1121468..1122592 - 1125 WP_041270387.1 phosphotransferase -
FRAAU_RS05135 () 1122616..1123536 - 921 WP_014402508.1 ABC transporter substrate-binding protein -
FRAAU_RS05140 () 1123627..1125912 - 2286 WP_014402509.1 TonB-dependent siderophore receptor -
FRAAU_RS17175 () 1126378..1126515 + 138 WP_156803344.1 hypothetical protein -
FRAAU_RS16355 () 1126604..1127218 + 615 WP_014402510.1 hypothetical protein -
FRAAU_RS05150 () 1127273..1127890 - 618 WP_014402511.1 TetR/AcrR family transcriptional regulator -
FRAAU_RS05155 () 1128105..1129319 + 1215 WP_041270388.1 MFS transporter -
FRAAU_RS05160 () 1129403..1130260 + 858 WP_014402513.1 NAD(P)-dependent oxidoreductase -
FRAAU_RS16360 () 1130311..1131567 - 1257 WP_014402514.1 TlpA family protein disulfide reductase -
FRAAU_RS05170 () 1132220..1132549 + 330 WP_014402515.1 hypothetical protein -
FRAAU_RS05175 () 1132536..1133639 - 1104 WP_014402516.1 homoserine O-acetyltransferase -
FRAAU_RS05180 () 1133639..1134703 - 1065 WP_041270869.1 hypothetical protein -
FRAAU_RS05185 () 1134700..1135146 - 447 WP_014402518.1 cytochrome c-type biogenesis protein CcmH -
FRAAU_RS05190 () 1135143..1135688 - 546 WP_014402519.1 DsbE family thiol:disulfide interchange protein -
FRAAU_RS05195 () 1135688..1137646 - 1959 WP_014402520.1 Cytochrome c-type biogenesis protein CcmF VF
FRAAU_RS05200 () 1137643..1138110 - 468 WP_014402521.1 Cytochrome c-type biogenesis protein CcmE VF
FRAAU_RS05205 () 1138148..1138348 - 201 WP_014402522.1 hypothetical protein VF
FRAAU_RS05210 () 1138345..1139106 - 762 WP_014402523.1 Heme exporter protein C VF
FRAAU_RS05215 () 1139204..1139911 - 708 WP_014402524.1 Heme exporter protein B VF
FRAAU_RS05220 () 1139904..1140536 - 633 WP_014402525.1 Cytochrome c biogenesis ATP-binding export protein CcmA VF
FRAAU_RS05225 () 1140586..1141023 - 438 WP_014402526.1 DUF3293 domain-containing protein -
FRAAU_RS05230 () 1141020..1142390 - 1371 WP_014402527.1 FAD-dependent monooxygenase -
FRAAU_RS05235 () 1142630..1143229 + 600 WP_014402528.1 ECF RNA polymerase sigma-E factor VF
FRAAU_RS05240 () 1143222..1143893 + 672 WP_014402529.1 Anti-sigma-E factor RseA VF
FRAAU_RS05245 () 1144093..1145514 + 1422 WP_041270871.1 Periplasmic serine endoprotease DegP VF
FRAAU_RS05250 () 1145664..1147454 + 1791 WP_014402531.1 translation elongation factor 4 -
FRAAU_RS05255 () 1147608..1148480 + 873 WP_014402532.1 signal peptidase I -
FRAAU_RS05260 () 1148477..1148893 + 417 WP_014402533.1 DUF4845 domain-containing protein -
FRAAU_RS05265 () 1148890..1149540 + 651 WP_014402534.1 ribonuclease III -
FRAAU_RS05270 () 1149537..1150466 + 930 WP_014402535.1 GTPase Era VF
FRAAU_RS05275 () 1150480..1151190 + 711 WP_014402536.1 DNA repair protein RecO -
FRAAU_RS17180 () 1151233..1152024 - 792 WP_156803345.1 hypothetical protein -
FRAAU_RS05290 () 1152192..1152782 - 591 WP_014402538.1 DNA-3-methyladenine glycosylase I -
FRAAU_RS05295 () 1152779..1153750 - 972 WP_014402539.1 Bifunctional transcriptional activator/DNA repair enzyme Ada VF
FRAAU_RS05305 () 1154001..1154276 + 276 WP_014402540.1 hypothetical protein -
FRAAU_RS05310 () 1154390..1155634 + 1245 WP_156803346.1 retroviral-like aspartic protease family protein -
FRAAU_RS05320 () 1155837..1156115 + 279 WP_014402542.1 hypothetical protein -
FRAAU_RS05325 () 1156572..1157255 - 684 WP_014402543.1 DUF2884 family protein -
FRAAU_RS05330 () 1157252..1158223 - 972 WP_014402544.1 hypothetical protein -
FRAAU_RS05335 () 1158220..1159077 - 858 WP_014402545.1 ABC transporter ATP-binding protein -
FRAAU_RS05340 () 1159074..1159442 - 369 WP_014402546.1 GntR family transcriptional regulator -
FRAAU_RS05345 () 1159447..1159797 - 351 WP_014402547.1 hypothetical protein -
FRAAU_RS05350 () 1160357..1161352 + 996 WP_014402548.1 TraB/GumN family protein -
FRAAU_RS16835 () 1161489..1161857 + 369 WP_156803347.1 DUF2778 domain-containing protein -
FRAAU_RS05355 () 1161854..1162234 + 381 WP_014402550.1 hypothetical protein -
FRAAU_RS05360 () 1162383..1162748 - 366 WP_014402551.1 hypothetical protein -
FRAAU_RS05365 () 1163394..1164309 + 916 Protein_1053 alpha/beta hydrolase -
FRAAU_RS05370 () 1164380..1165429 - 1050 WP_014402552.1 UDP-N-acetylmuramate dehydrogenase -
FRAAU_RS05375 () 1165419..1166450 - 1032 WP_014402553.1 quinone-dependent dihydroorotate dehydrogenase -
FRAAU_RS05385 () 1166979..1167371 - 393 WP_014402554.1 nuclear transport factor 2 family protein -
FRAAU_RS05390 () 1167400..1168932 - 1533 WP_014402555.1 aldehyde dehydrogenase family protein -
FRAAU_RS05395 () 1169357..1169878 + 522 WP_014402556.1 Ribosome maturation factor RimP VF
FRAAU_RS05400 () 1169937..1171439 + 1503 WP_014402557.1 transcription termination/antitermination protein NusA -
FRAAU_RS05405 () 1171564..1174398 + 2835 WP_014402558.1 translation initiation factor IF-2 -
FRAAU_RS05410 () 1174486..1174872 + 387 WP_014402559.1 30S ribosome-binding factor RbfA -
FRAAU_RS05415 () 1174924..1175880 + 957 WP_014402560.1 tRNA pseudouridine(55) synthase TruB -
FRAAU_RS05420 () 1176043..1176312 + 270 WP_014402561.1 30S ribosomal protein S15 -
FRAAU_RS05425 () 1176331..1178436 + 2106 WP_014402562.1 polyribonucleotide nucleotidyltransferase -
FRAAU_RS05430 () 1178638..1179375 + 738 WP_052317808.1 hypothetical protein -
FRAAU_RS05435 () 1179375..1180229 + 855 WP_014402564.1 DUF3037 domain-containing protein -
FRAAU_RS05440 () 1180695..1181804 + 1110 WP_014402565.1 poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) -
FRAAU_RS05445 () 1181816..1182874 + 1059 WP_014402566.1 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC -
FRAAU_RS05450 () 1182955..1183980 + 1026 WP_014402567.1 S-methyl-5-thioribose-1-phosphate isomerase -
FRAAU_RS05455 () 1183981..1184391 + 411 WP_014402568.1 GtrA family protein -
FRAAU_RS05460 () 1184533..1187163 + 2631 WP_014402569.1 DNA gyrase subunit A -
FRAAU_RS05465 () 1187360..1188274 - 915 WP_014402570.1 helix-turn-helix transcriptional regulator -
FRAAU_RS05470 () 1188335..1189762 + 1428 WP_014402571.1 MFS transporter -
FRAAU_RS05475 () 1190066..1190518 + 453 WP_014402572.1 Spore protein SP21 VF
FRAAU_RS05480 () 1190605..1191504 + 900 WP_014402573.1 J domain-containing protein -
FRAAU_RS05485 () 1191561..1191905 - 345 WP_041270876.1 helix-turn-helix transcriptional regulator -
FRAAU_RS05490 () 1192109..1192876 + 768 WP_014402575.1 SDR family oxidoreductase -
FRAAU_RS16365 () 1193468..1195741 + 2274 WP_169314749.1 endopolygalacturonase -
FRAAU_RS05505 () 1195964..1197085 + 1122 WP_014402577.1 6-hydroxynicotinate 3-monooxygenase VF
FRAAU_RS05510 () 1197121..1197873 + 753 WP_014402578.1 IclR family transcriptional regulator -
FRAAU_RS05515 () 1198141..1199799 - 1659 WP_014402579.1 M1 family metallopeptidase -
FRAAU_RS05520 () 1200049..1201236 + 1188 WP_014402580.1 NAD(P)/FAD-dependent oxidoreductase -
FRAAU_RS05525 () 1201313..1202203 + 891 WP_014402581.1 NAD(P)-dependent oxidoreductase -
FRAAU_RS05530 () 1202264..1203154 - 891 WP_014402582.1 Trans-2,3-dihydro-3-hydroxyanthranilate isomerase VF
FRAAU_RS05535 () 1203286..1203903 + 618 WP_014402583.1 rhomboid family intramembrane serine protease -
FRAAU_RS16840 () 1204003..1204464 + 462 WP_083841127.1 hypothetical protein -
FRAAU_RS05545 () 1204556..1205629 + 1074 WP_014402585.1 aminopeptidase -
FRAAU_RS05550 () 1205848..1207959 + 2112 WP_014402586.1 cation:proton antiporter -
FRAAU_RS05555 () 1208046..1209236 + 1191 WP_174269757.1 nicotinate phosphoribosyltransferase -
FRAAU_RS05560 () 1209541..1210344 - 804 WP_014402588.1 Methionine-binding lipoprotein MetQ VF
FRAAU_RS05565 () 1210413..1211090 - 678 WP_041270880.1 ABC transporter permease -
FRAAU_RS05570 () 1211090..1212100 - 1011 WP_014402590.1 Methionine import ATP-binding protein MetN VF
FRAAU_RS05575 () 1212239..1212724 + 486 WP_014402591.1 glutathione peroxidase -
FRAAU_RS05580 () 1212902..1213918 - 1017 WP_014402592.1 cysteine synthase A -
FRAAU_RS05585 () 1214397..1215431 + 1035 WP_041270881.1 homoserine O-succinyltransferase -
FRAAU_RS05590 () 1215437..1216624 + 1188 WP_014402594.1 cystathionine gamma-synthase -
FRAAU_RS05595 () 1216621..1217709 + 1089 WP_014402595.1 homoserine dehydrogenase -
FRAAU_RS05600 () 1217803..1219410 - 1608 WP_014402596.1 APC family permease -
FRAAU_RS05605 () 1219653..1221635 + 1983 WP_014402597.1 FUSC family protein -
FRAAU_RS05610 () 1221641..1221871 + 231 WP_156803488.1 DUF1656 domain-containing protein -
FRAAU_RS05615 () 1221879..1222892 + 1014 WP_014402599.1 HlyD family secretion protein -
FRAAU_RS05620 () 1222883..1224373 + 1491 WP_014402600.1 Cation efflux system protein CusC VF
FRAAU_RS05625 () 1224774..1225406 - 633 Protein_1103 RES family NAD+ phosphorylase -
FRAAU_RS05630 () 1225410..1226036 - 627 WP_014402601.1 hypothetical protein -
FRAAU_RS05635 () 1226340..1227722 - 1383 WP_014402602.1 L-serine ammonia-lyase -
FRAAU_RS05640 () 1227807..1229918 - 2112 WP_014402603.1 peptidase domain-containing ABC transporter -
FRAAU_RS05645 () 1229911..1231206 - 1296 WP_014402604.1 HlyD family efflux transporter periplasmic adaptor subunit -
FRAAU_RS05650 () 1231475..1232791 - 1317 WP_014402605.1 2-oxo acid dehydrogenase subunit E2 -
FRAAU_RS05655 () 1232858..1233838 - 981 WP_014402606.1 alpha-ketoacid dehydrogenase subunit beta -
FRAAU_RS05660 () 1233844..1234920 - 1077 WP_014402607.1 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha -
FRAAU_RS05665 () 1235176..1236018 + 843 WP_014402608.1 tryptophan 2,3-dioxygenase -
FRAAU_RS05670 () 1236101..1237909 + 1809 WP_014402609.1 DNA helicase RecQ -
FRAAU_RS05675 () 1237931..1238569 - 639 WP_014402610.1 molybdopterin adenylyltransferase -
FRAAU_RS05680 () 1238654..1239256 + 603 WP_014402611.1 class I SAM-dependent methyltransferase -
FRAAU_RS05685 () 1239199..1240170 - 972 WP_014402612.1 LysR family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance