MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 174494 bp
Accession: NC_016907 Location: 1..174494 Organism: Gordonia polyisoprenivorans VH2 Replicon: plasmid p174
Accession: NC_016907 Location: 1..174494 Organism: Gordonia polyisoprenivorans VH2 Replicon: plasmid p174
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPOL_RS25240 () | 180..1458 | - | 1279 | Protein_0 | phosphopyruvate hydratase | - |
| GPOL_RS25245 () | 1489..2242 | - | 754 | Protein_1 | C-terminal binding protein | - |
| GPOL_RS26530 () | 2405..2752 | - | 348 | WP_148275564.1 | IS3 family transposase ISTesp3 | Transposase |
| GPOL_RS26535 () | 3105..3449 | + | 345 | WP_148275565.1 | IS3 family transposase | - |
| GPOL_RS26655 () | 3422..3919 | + | 498 | WP_148275566.1 | hypothetical protein | - |
| GPOL_RS25265 () | 3930..4847 | + | 918 | Protein_5 | IS30 family transposase ISPfr14 | Transposase |
| GPOL_RS26545 () | 5429..6517 | - | 1089 | Protein_6 | IS3 family transposase ISMyma1 | Transposase |
| GPOL_RS25280 () | 6954..7835 | - | 882 | WP_043457689.1 | alpha/beta fold hydrolase | - |
| GPOL_RS25285 () | 7954..9036 | + | 1083 | WP_043456849.1 | IS110 family transposase ISMtsp6 | Transposase |
| GPOL_RS25290 () | 9442..9918 | - | 477 | WP_014362128.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| GPOL_RS25295 () | 10186..11118 | + | 933 | WP_043457634.1 | chlorophyllase | - |
| GPOL_RS25300 () | 12825..14063 | + | 1239 | WP_043457635.1 | DUF2236 domain-containing protein | - |
| GPOL_RS25305 () | 14582..15580 | + | 999 | WP_043457691.1 | FAD:protein FMN transferase | - |
| GPOL_RS25310 () | 15577..16137 | + | 561 | WP_014362132.1 | ferric reductase-like transmembrane domain-containing protein | - |
| GPOL_RS26555 () | 16134..17255 | + | 1122 | WP_081484795.1 | NADH-quinone oxidoreductase | - |
| GPOL_RS26560 () | 17255..17494 | + | 240 | WP_081484796.1 | ferredoxin | - |
| GPOL_RS25315 () | 17760..18470 | + | 711 | WP_043457636.1 | TetR/AcrR family transcriptional regulator | - |
| GPOL_RS25320 () | 18590..18994 | - | 405 | WP_052316434.1 | TIGR03618 family F420-dependent PPOX class oxidoreductase | - |
| GPOL_RS25325 () | 19099..20421 | + | 1323 | WP_043456975.1 | IS256 family transposase IS1554 | Transposase |
| GPOL_RS25335 () | 21059..22240 | - | 1182 | WP_148275567.1 | hypothetical protein | - |
| GPOL_RS26850 () | 22237..22596 | - | 360 | WP_052316435.1 | hypothetical protein | Relaxase |
| GPOL_RS25345 () | 22780..23445 | - | 666 | WP_081484803.1 | RES family NAD+ phosphorylase | - |
| GPOL_RS25350 () | 23433..24020 | - | 588 | WP_014362140.1 | helix-turn-helix domain-containing protein | - |
| GPOL_RS26565 () | 24048..24671 | - | 624 | WP_014362141.1 | DUF2716 domain-containing protein | - |
| GPOL_RS26855 () | 24850..25155 | - | 306 | WP_148275569.1 | hypothetical protein | - |
| GPOL_RS25355 () | 25399..26793 | - | 1395 | Protein_25 | IS1380 family transposase ISRer1 | Transposase |
| GPOL_RS25360 () | 27007..28317 | + | 1311 | WP_014362144.1 | ISL3 family transposase IS1207 | Transposase |
| GPOL_RS25365 () | 28398..29064 | + | 667 | Protein_27 | hypothetical protein | - |
| GPOL_RS25370 () | 29635..29853 | + | 219 | WP_014362146.1 | hypothetical protein | - |
| GPOL_RS25375 () | 30033..30548 | - | 516 | WP_014362147.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| GPOL_RS25380 () | 30649..31185 | - | 537 | WP_148275573.1 | hypothetical protein | - |
| GPOL_RS25385 () | 31278..31670 | - | 393 | WP_014362149.1 | Lsr2 family protein | - |
| GPOL_RS25390 () | 32356..32535 | + | 180 | WP_014362151.1 | hypothetical protein | - |
| GPOL_RS25395 () | 32989..33393 | - | 405 | WP_148275570.1 | hypothetical protein | - |
| GPOL_RS25400 () | 33552..34364 | - | 813 | WP_014362153.1 | IS21 family transposase ISMyma9 | Transposase |
| GPOL_RS25405 () | 34364..35571 | - | 1208 | Protein_35 | IS21 family transposase ISMyma9 | Transposase |
| GPOL_RS25410 () | 35619..35852 | - | 234 | WP_014362154.1 | putative flavodoxin | - |
| GPOL_RS25420 () | 36537..37446 | + | 910 | Protein_37 | RNA polymerase sigma-70 factor | - |
| GPOL_RS26185 () | 37554..38030 | + | 477 | WP_052316436.1 | OsmC family protein | - |
| GPOL_RS25430 () | 38100..38522 | + | 423 | WP_043457701.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| GPOL_RS25435 () | 38567..39724 | + | 1158 | WP_006368101.1 | GTP-binding protein | - |
| GPOL_RS25440 () | 39768..41141 | - | 1374 | WP_043457704.1 | NADP-dependent succinic semialdehyde dehydrogenase | - |
| GPOL_RS25445 () | 41295..42068 | - | 774 | WP_006368099.1 | acetoin reductase | - |
| GPOL_RS25450 () | 42208..43290 | - | 1083 | WP_014362162.1 | alpha/beta hydrolase | - |
| GPOL_RS25455 () | 43320..44243 | + | 924 | WP_014362163.1 | hypothetical protein | - |
| GPOL_RS25460 () | 44294..45394 | - | 1101 | WP_006368096.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| GPOL_RS25465 () | 45469..46488 | + | 1020 | WP_014362164.1 | LLM class flavin-dependent oxidoreductase | - |
| GPOL_RS25470 () | 46509..48380 | - | 1872 | WP_014362165.1 | acyl-CoA thioester hydrolase | - |
| GPOL_RS25475 () | 48493..49488 | + | 996 | WP_014362166.1 | hypothetical protein | - |
| GPOL_RS25480 () | 49572..52013 | + | 2442 | WP_014362167.1 | RNA-binding transcriptional accessory protein | - |
| GPOL_RS25485 () | 52021..52482 | + | 462 | WP_014362168.1 | NUDIX domain-containing protein | - |
| GPOL_RS25490 () | 52482..53291 | + | 810 | WP_014362169.1 | shikimate 5-dehydrogenase | - |
| GPOL_RS25495 () | 53487..54851 | + | 1365 | WP_043457647.1 | DUF4185 domain-containing protein | - |
| GPOL_RS25500 () | 54883..56634 | - | 1752 | WP_014362171.1 | ubiquinone-dependent pyruvate dehydrogenase | - |
| GPOL_RS25505 () | 56680..57804 | - | 1125 | WP_014362172.1 | hypothetical protein | - |
| GPOL_RS25510 () | 57863..58285 | - | 423 | WP_006368086.1 | hypothetical protein | - |
| GPOL_RS25515 () | 58381..58731 | + | 351 | WP_006368085.1 | VOC family protein | - |
| GPOL_RS25520 () | 58751..59329 | + | 579 | WP_014362173.1 | G/U mismatch-specific DNA glycosylase | - |
| GPOL_RS25525 () | 59351..59650 | - | 300 | WP_014362174.1 | DUF503 domain-containing protein | - |
| GPOL_RS25530 () | 59725..60555 | - | 831 | WP_014362175.1 | polyphosphate kinase 2 | - |
| GPOL_RS25535 () | 60613..61605 | - | 993 | WP_014362176.1 | malate dehydrogenase | - |
| GPOL_RS25540 () | 61656..62126 | - | 471 | WP_014362177.1 | META domain-containing protein | - |
| GPOL_RS25545 () | 62341..64857 | + | 2517 | WP_043457713.1 | accessory Sec system translocase SecA2 | - |
| GPOL_RS25550 () | 64854..65498 | + | 645 | WP_014362179.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| GPOL_RS25555 () | 65527..65931 | + | 405 | WP_014362180.1 | glycine cleavage system protein GcvH | - |
| GPOL_RS25560 () | 66257..66703 | + | 447 | WP_006368076.1 | Glycogen accumulation regulator GarA | VF |
| GPOL_RS25565 () | 66747..67433 | + | 687 | WP_014362182.1 | MerR family DNA-binding transcriptional regulator | - |
| GPOL_RS25570 () | 67575..68075 | + | 501 | WP_006368074.1 | bifunctional nuclease family protein | - |
| GPOL_RS25575 () | 68360..68977 | + | 618 | WP_006368073.1 | MerR family transcriptional regulator | - |
| GPOL_RS25580 () | 69324..72248 | + | 2925 | WP_014362184.1 | aminomethyl-transferring glycine dehydrogenase | - |
| GPOL_RS25585 () | 72280..73470 | - | 1191 | WP_014362185.1 | hypothetical protein | - |
| GPOL_RS25590 () | 73553..75742 | - | 2190 | WP_014362186.1 | malate synthase G | - |
| GPOL_RS25595 () | 75841..76782 | - | 942 | WP_014362187.1 | hypothetical protein | - |
| GPOL_RS25600 () | 76784..77860 | - | 1077 | WP_014362188.1 | hemolysin family protein | - |
| GPOL_RS25605 () | 77857..79305 | - | 1449 | WP_014362189.1 | hemolysin family protein | - |
| GPOL_RS25610 () | 79313..80746 | - | 1434 | WP_014362190.1 | GuaB1 family IMP dehydrogenase-related protein | - |
| GPOL_RS25615 () | 80799..82256 | - | 1458 | WP_014362191.1 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | VF |
| GPOL_RS25620 () | 82332..83285 | - | 954 | WP_014362192.1 | M56 family metallopeptidase | - |
| GPOL_RS25625 () | 83333..83731 | - | 399 | WP_006368063.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| GPOL_RS25630 () | 84035..84469 | + | 435 | WP_006368062.1 | PaaI family thioesterase | - |
| GPOL_RS25635 () | 84466..85722 | + | 1257 | WP_014362193.1 | aldolase | - |
| GPOL_RS25640 () | 85866..86168 | + | 303 | WP_014362194.1 | Urease subunit gamma | VF |
| GPOL_RS25645 () | 86186..86515 | + | 330 | WP_014362195.1 | Urease subunit beta 1 | VF |
| GPOL_RS25650 () | 86517..88235 | + | 1719 | WP_014362196.1 | Urease subunit alpha | VF |
| GPOL_RS25655 () | 88281..88901 | + | 621 | WP_170320168.1 | urease accessory protein UreF | - |
| GPOL_RS25660 () | 88972..89676 | + | 705 | WP_006368056.1 | Urease accessory protein UreG | VF |
| GPOL_RS25665 () | 89677..90387 | + | 711 | WP_014362197.1 | urease accessory protein UreD | - |
| GPOL_RS25670 () | 90403..91899 | - | 1497 | WP_006368054.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| GPOL_RS25675 () | 92100..92675 | - | 576 | WP_014362198.1 | GNAT family N-acetyltransferase | - |
| GPOL_RS25680 () | 92851..93333 | + | 483 | WP_014362199.1 | acyl-CoA thioesterase | - |
| GPOL_RS25685 () | 93349..96777 | + | 3429 | WP_014362200.1 | exodeoxyribonuclease V subunit gamma | - |
| GPOL_RS25690 () | 96774..100259 | + | 3486 | WP_006368048.1 | UvrD-helicase domain-containing protein | - |
| GPOL_RS25695 () | 100256..102364 | + | 2109 | WP_014362201.1 | exodeoxyribonuclease V subunit alpha | - |
| GPOL_RS25700 () | 102442..103194 | - | 753 | WP_006368044.1 | PIG-L family deacetylase | - |
| GPOL_RS25705 () | 103378..105474 | + | 2097 | WP_006368042.1 | molecular chaperone HtpG | - |
| GPOL_RS25710 () | 105467..106502 | + | 1036 | Protein_95 | hypothetical protein | - |
| GPOL_RS25715 () | 106523..107080 | - | 558 | WP_014362204.1 | hypothetical protein | - |
| GPOL_RS25720 () | 107214..107687 | + | 474 | WP_006368037.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| GPOL_RS25725 () | 107717..108544 | - | 828 | WP_014362205.1 | crotonase/enoyl-CoA hydratase family protein | - |
| GPOL_RS25730 () | 108932..109891 | + | 960 | WP_014362206.1 | hypothetical protein | VF |
| GPOL_RS25735 () | 109888..110439 | + | 552 | WP_014362207.1 | dihydrofolate reductase family protein | - |
| GPOL_RS25740 () | 110432..111532 | - | 1101 | WP_014362208.1 | diacylglycerol kinase | - |
| GPOL_RS25745 () | 111705..112439 | + | 735 | WP_006368032.1 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | VF |
| GPOL_RS25750 () | 112535..113587 | + | 1053 | WP_014362209.1 | ABC transporter permease | - |
| GPOL_RS25755 () | 113584..114411 | + | 828 | WP_014362210.1 | ABC transporter ATP-binding protein | - |
| GPOL_RS25760 () | 114408..115307 | + | 900 | WP_014362211.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| GPOL_RS25765 () | 115304..115897 | + | 594 | WP_014362212.1 | TetR family transcriptional regulator | - |
| GPOL_RS25770 () | 115901..116599 | - | 699 | WP_014362213.1 | DUF1275 domain-containing protein | - |
| GPOL_RS25775 () | 116627..117256 | - | 630 | WP_014362214.1 | uracil phosphoribosyltransferase | - |
| GPOL_RS25780 () | 117303..118511 | - | 1209 | WP_014362215.1 | URC4/urg3 family protein | - |
| GPOL_RS25785 () | 118544..119836 | - | 1293 | WP_014362216.1 | GTP cyclohydrolase II | - |
| GPOL_RS25790 () | 119966..120559 | - | 594 | WP_014362217.1 | Glycine/sarcosine N-methyltransferase | VF |
| GPOL_RS25795 () | 120896..121429 | + | 534 | WP_014362218.1 | FBP domain-containing protein | - |
| GPOL_RS25800 () | 121501..123729 | - | 2229 | WP_043457654.1 | Catalase-peroxidase | VF |
| GPOL_RS25805 () | 123766..124209 | - | 444 | WP_014362220.1 | transcriptional repressor | - |
| GPOL_RS25810 () | 124363..125238 | + | 876 | WP_014362221.1 | N-acetyltransferase | - |
| GPOL_RS25815 () | 125235..126125 | + | 891 | WP_014362222.1 | hypothetical protein | - |
| GPOL_RS25820 () | 126148..127101 | - | 954 | WP_014362223.1 | alpha/beta hydrolase | - |
| GPOL_RS25825 () | 127159..128505 | - | 1347 | WP_014362224.1 | VWA domain-containing protein | - |
| GPOL_RS25830 () | 128627..129085 | + | 459 | WP_006370060.1 | PPOX class F420-dependent oxidoreductase | - |
| GPOL_RS25835 () | 129077..131026 | - | 1950 | WP_014362226.1 | cadmium-translocating P-type ATPase | - |
| GPOL_RS25840 () | 131087..131446 | + | 360 | WP_014362227.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GPOL_RS25845 () | 131480..132424 | + | 945 | WP_014362228.1 | arsenic resistance protein | - |
| GPOL_RS25850 () | 132496..133041 | + | 546 | WP_014362229.1 | YceI family protein | - |
| GPOL_RS25855 () | 133351..138843 | + | 5493 | WP_006370064.1 | ATP-grasp domain-containing protein | - |
| GPOL_RS25860 () | 139027..139539 | + | 513 | WP_014362231.1 | hypothetical protein | - |
| GPOL_RS25865 () | 139599..141239 | - | 1641 | WP_014362232.1 | alkaline phosphatase family protein | - |
| GPOL_RS25870 () | 141364..141792 | + | 429 | WP_014362233.1 | SRPBCC family protein | - |
| GPOL_RS25875 () | 141914..143263 | + | 1350 | WP_014362234.1 | NADP-specific glutamate dehydrogenase | - |
| GPOL_RS25880 () | 143324..144409 | - | 1086 | WP_014362235.1 | helix-turn-helix domain-containing protein | - |
| GPOL_RS25885 () | 144431..145402 | - | 972 | WP_006368686.1 | alpha/beta hydrolase | - |
| GPOL_RS25890 () | 145573..146352 | - | 780 | WP_014362236.1 | alpha/beta hydrolase | - |
| GPOL_RS25895 () | 146467..147078 | + | 612 | WP_014362237.1 | class I SAM-dependent methyltransferase | - |
| GPOL_RS25900 () | 147118..148056 | - | 939 | WP_014362238.1 | aldo/keto reductase | - |
| GPOL_RS25905 () | 148191..148724 | + | 534 | WP_014362239.1 | TetR/AcrR family transcriptional regulator | - |
| GPOL_RS25910 () | 148842..149525 | + | 684 | WP_014362240.1 | haloacid dehalogenase type II | - |
| GPOL_RS25915 () | 149660..150928 | + | 1269 | WP_014362241.1 | APC family permease | - |
| GPOL_RS25920 () | 150975..151766 | + | 792 | WP_006368694.1 | ABC transporter permease | - |
| GPOL_RS25925 () | 151864..152043 | + | 180 | WP_014362243.1 | hypothetical protein | - |
| GPOL_RS25930 () | 152684..152893 | + | 210 | WP_026920098.1 | DUF3018 family protein | Antitoxin Detail |
| GPOL_RS25935 () | 152890..153222 | + | 333 | WP_043457659.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| GPOL_RS25940 () | 153441..153806 | + | 366 | WP_043457662.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GPOL_RS25945 () | 153803..154891 | + | 1089 | WP_043457664.1 | ACR3 family arsenite efflux transporter | - |
| GPOL_RS25950 () | 154884..155294 | + | 411 | WP_014362247.1 | low molecular weight phosphatase family protein | - |
| GPOL_RS25955 () | 155313..155807 | - | 495 | WP_014362248.1 | VOC family protein | - |
| GPOL_RS25960 () | 155910..156275 | + | 366 | WP_014362249.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GPOL_RS25965 () | 156691..158925 | - | 2235 | WP_014362250.1 | hypothetical protein | - |
| GPOL_RS25980 () | 159768..160772 | - | 1005 | WP_148275571.1 | AAA family ATPase | - |
| GPOL_RS25985 () | 160785..162794 | - | 2010 | WP_014362254.1 | Mu transposase C-terminal domain-containing protein | - |
| GPOL_RS26595 () | 162776..163558 | - | 783 | WP_081484799.1 | TnsA-like heteromeric transposase endonuclease subunit | - |
| GPOL_RS26000 () | 163684..164436 | - | 753 | WP_043457677.1 | SDR family oxidoreductase | - |
| GPOL_RS26600 () | 164510..164893 | + | 384 | WP_081484800.1 | helix-turn-helix transcriptional regulator | - |
| GPOL_RS26605 () | 165672..165992 | - | 321 | WP_081484801.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GPOL_RS26005 () | 166000..166347 | - | 348 | WP_014362258.1 | hypothetical protein | - |
| GPOL_RS26610 () | 166811..167895 | + | 1085 | Protein_154 | IS110 family transposase ISCARN28 | Transposase |
| GPOL_RS26015 () | 168264..168893 | + | 630 | WP_043457723.1 | TetR/AcrR family transcriptional regulator | - |
| GPOL_RS26020 () | 168922..170076 | + | 1155 | WP_014362261.1 | FAD-dependent oxidoreductase | - |
| GPOL_RS26030 () | 170612..171895 | - | 1284 | WP_014358297.1 | IS256 family transposase ISGpo1 | Transposase |
| GPOL_RS26615 () | 172066..172401 | + | 336 | WP_014362262.1 | hypothetical protein | - |
| GPOL_RS26040 () | 172405..172815 | - | 411 | Protein_159 | IS110 family transposase ISMysp1 | Transposase |
| GPOL_RS26045 () | 173041..174364 | - | 1324 | Protein_160 | IS256 family transposase IS1554 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|