MGE detailed information
MGE type: Genomic_island MGE length: 14655 bp
Accession: NC_016822 Location: 283543..298197 Organism: Shigella sonnei 53G Replicon: chromosome
Accession: NC_016822 Location: 283543..298197 Organism: Shigella sonnei 53G Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSON53G_RS01345 (278603) | 278603..282820 | + | 4218 | WP_000508700.1 | RHS element core protein | - |
| SSON53G_RS01350 (282832) | 282832..283281 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| SSON53G_RS01360 (283543) | 283543..284679 | + | 1137 | Protein_254 | ISAs1-like element ISEc1 family transposase | - |
| SSON53G_RS31370 (286077) | 286077..286394 | + | 318 | WP_001163457.1 | hypothetical protein | - |
| SSON53G_RS01380 (286394) | 286394..286771 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| SSON53G_RS01385 (287240) | 287240..288376 | + | 1137 | WP_000420787.1 | ISAs1-like element ISEc1 family transposase | - |
| SSON53G_RS01390 (288418) | 288418..289188 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| SSON53G_RS01395 (289369) | 289369..289815 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| SSON53G_RS01400 (289858) | 289858..292302 | - | 2445 | WP_000973074.1 | acyl-CoA dehydrogenase FadE | - |
| SSON53G_RS01405 (292542) | 292542..293120 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| SSON53G_RS01410 (293326) | 293326..294093 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| SSON53G_RS01415 (294064) | 294064..294804 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| SSON53G_RS01420 (294960) | 294960..295238 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| SSON53G_RS01425 (295241) | 295241..295501 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| SSON53G_RS01430 (295687) | 295687..296460 | + | 774 | WP_127148796.1 | C40 family peptidase | - |
| SSON53G_RS33290 (297501) | 297501..297629 | + | 129 | Protein_269 | ISAs1 family transposase | - |
| SSON53G_RS01440 (297700) | 297700..298197 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| SSON53G_RS01445 (298320) | 298320..300032 | - | 1713 | Protein_271 | flagellar biosynthesis protein FlhA | - |
| SSON53G_RS01450 (300004) | 300004..300789 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| SSON53G_RS01455 (300860) | 300860..301915 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| SSON53G_RS01460 (301912) | 301912..302364 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| SSON53G_RS01465 (302610) | 302610..303128 | + | 519 | Protein_275 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|