MGE detailed information
MGE type: Genomic_island MGE length: 23891 bp
Accession: NC_016816 Location: 1145993..1169883 Organism: Pantoea ananatis LMG 5342 Replicon: chromosome
Accession: NC_016816 Location: 1145993..1169883 Organism: Pantoea ananatis LMG 5342 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PANA5342_RS28055 () | 1141960..1142856 | - | 897 | WP_015699692.1 | alpha/beta fold hydrolase | - |
| PANA5342_RS28060 () | 1143021..1143638 | - | 618 | WP_015699694.1 | TetR/AcrR family transcriptional regulator | - |
| PANA5342_RS28065 () | 1143841..1144305 | - | 465 | WP_015699695.1 | hypothetical protein | - |
| PANA5342_RS28070 () | 1144913..1145917 | - | 1005 | WP_015699696.1 | hypothetical protein | - |
| PANA5342_RS28075 () | 1146317..1147729 | - | 1413 | WP_041455837.1 | hypothetical protein | - |
| PANA5342_RS46185 () | 1148043..1148222 | - | 180 | Protein_1053 | integrase | - |
| PANA5342_RS28080 () | 1148605..1148934 | - | 330 | WP_015699698.1 | TA system toxin CbtA family protein | Toxin Detail |
| PANA5342_RS28085 () | 1148973..1149338 | - | 366 | WP_015699699.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PANA5342_RS28090 () | 1149364..1149585 | - | 222 | WP_015699700.1 | DUF987 family protein | - |
| PANA5342_RS28095 () | 1149582..1150124 | - | 543 | WP_015699701.1 | DNA repair protein RadC | - |
| PANA5342_RS28100 () | 1150137..1150580 | - | 444 | WP_015699702.1 | antirestriction protein | - |
| PANA5342_RS28105 () | 1150611..1151432 | - | 822 | WP_015699703.1 | DUF945 domain-containing protein | - |
| PANA5342_RS28110 () | 1151531..1151761 | - | 231 | WP_041455838.1 | DUF905 domain-containing protein | - |
| PANA5342_RS28115 () | 1151833..1152282 | - | 450 | WP_015699704.1 | hypothetical protein | - |
| PANA5342_RS28120 () | 1152279..1152731 | - | 453 | WP_015699705.1 | hypothetical protein | - |
| PANA5342_RS28125 () | 1152768..1153337 | - | 570 | WP_015699706.1 | hypothetical protein | - |
| PANA5342_RS28130 () | 1153337..1154041 | - | 705 | WP_015699707.1 | WYL domain-containing protein | - |
| PANA5342_RS28135 () | 1154242..1155117 | - | 876 | WP_015699708.1 | GTPase family protein | - |
| PANA5342_RS28140 () | 1155459..1156997 | + | 1539 | WP_041455839.1 | N-6 DNA methylase | - |
| PANA5342_RS28145 () | 1156994..1158691 | + | 1698 | WP_015699711.1 | restriction endonuclease subunit S | - |
| PANA5342_RS28150 () | 1158706..1160367 | + | 1662 | WP_015699712.1 | AAA family ATPase | - |
| PANA5342_RS28155 () | 1160364..1161227 | + | 864 | WP_015699713.1 | hypothetical protein | - |
| PANA5342_RS28160 () | 1161714..1162430 | - | 717 | WP_041455840.1 | hypothetical protein | - |
| PANA5342_RS28165 () | 1163056..1164837 | - | 1782 | WP_015699714.1 | hypothetical protein | - |
| PANA5342_RS28170 () | 1164890..1165159 | + | 270 | WP_052310178.1 | AlpA family phage regulatory protein | - |
| PANA5342_RS28175 () | 1165182..1166159 | + | 978 | WP_015699715.1 | DUF3987 domain-containing protein | - |
| PANA5342_RS46040 () | 1166146..1166685 | + | 540 | WP_052310179.1 | DUF3987 domain-containing protein | - |
| PANA5342_RS45580 () | 1166984..1167665 | + | 682 | Protein_1075 | inovirus Gp2 family protein | - |
| PANA5342_RS28180 () | 1167866..1168552 | - | 687 | WP_041455842.1 | TIGR02646 family protein | - |
| PANA5342_RS28185 () | 1168552..1169883 | - | 1332 | WP_015699718.1 | AAA family ATPase | - |
| PANA5342_RS28190 () | 1170195..1171436 | - | 1242 | WP_015699719.1 | integrase | - |
| PANA5342_RS28195 () | 1172047..1172529 | - | 483 | WP_013026784.1 | SsrA-binding protein SmpB | - |
| PANA5342_RS28200 () | 1172688..1173122 | + | 435 | WP_013026783.1 | type II toxin-antitoxin system RatA family toxin | - |
| PANA5342_RS28205 () | 1173115..1173408 | + | 294 | WP_013026782.1 | RnfH family protein | - |
| PANA5342_RS28210 () | 1173539..1173889 | - | 351 | WP_014605250.1 | outer membrane protein assembly factor BamE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|