MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 80276 bp
Accession: NC_016630 Location: 394269..474544 Organism: Filifactor alocis ATCC 35896 Replicon: chromosome
Accession: NC_016630 Location: 394269..474544 Organism: Filifactor alocis ATCC 35896 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HMPREF0389_RS01730 () | 390094..391251 | - | 1158 | WP_014262021.1 | cysteine desulfurase | - |
| HMPREF0389_RS01735 () | 391331..391846 | - | 516 | WP_014262022.1 | Gx transporter family protein | - |
| HMPREF0389_RS01740 () | 391879..392262 | - | 384 | WP_014262023.1 | NusG domain II-containing protein | - |
| HMPREF0389_RS01745 () | 392346..393962 | - | 1617 | WP_014262024.1 | Na/Pi cotransporter family protein | - |
| HMPREF0389_RS01750 () | 393996..394301 | - | 306 | WP_014262025.1 | hypothetical protein | - |
| HMPREF0389_RS08685 () | 394323..395066 | - | 744 | WP_169308502.1 | DUF881 domain-containing protein | - |
| HMPREF0389_RS01760 () | 395127..395738 | - | 612 | WP_014262027.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| HMPREF0389_RS01765 () | 395807..398128 | - | 2322 | WP_014262028.1 | endopeptidase La | - |
| HMPREF0389_RS01770 () | 399022..399321 | + | 300 | WP_041250749.1 | hypothetical protein | - |
| HMPREF0389_RS01775 () | 399452..401071 | - | 1620 | WP_156775278.1 | polysaccharide biosynthesis protein | - |
| HMPREF0389_RS01780 () | 401295..402392 | - | 1098 | WP_014262030.1 | peptidylprolyl isomerase | - |
| HMPREF0389_RS01785 () | 402473..405847 | - | 3375 | WP_014262031.1 | transcription-repair coupling factor | - |
| HMPREF0389_RS01790 () | 405859..406419 | - | 561 | WP_014262032.1 | aminoacyl-tRNA hydrolase | - |
| HMPREF0389_RS01795 () | 406478..406822 | - | 345 | WP_156775279.1 | Mini-ribonuclease 3 | - |
| HMPREF0389_RS01800 () | 406873..408273 | - | 1401 | WP_014262034.1 | cysteine--tRNA ligase | - |
| HMPREF0389_RS01805 () | 408374..409501 | - | 1128 | WP_174254345.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| HMPREF0389_RS01810 () | 409564..412209 | - | 2646 | WP_014262036.1 | alanine--tRNA ligase | - |
| HMPREF0389_RS01820 () | 413323..413700 | - | 378 | WP_014262037.1 | hypothetical protein | - |
| HMPREF0389_RS01830 () | 414088..414708 | - | 621 | WP_014262038.1 | hypothetical protein | - |
| HMPREF0389_RS01840 () | 415227..415847 | - | 621 | WP_014262040.1 | hypothetical protein | - |
| HMPREF0389_RS01855 () | 416737..417355 | - | 619 | Protein_364 | peptide ABC transporter substrate-binding protein | - |
| HMPREF0389_RS01865 () | 417867..418244 | - | 378 | WP_014262045.1 | hypothetical protein | - |
| HMPREF0389_RS01870 () | 418257..418634 | - | 378 | WP_041250755.1 | hypothetical protein | - |
| HMPREF0389_RS08840 () | 418631..419250 | - | 620 | Protein_367 | peptide ABC transporter substrate-binding protein | - |
| HMPREF0389_RS08845 () | 419914..420294 | - | 381 | Protein_368 | InlB B-repeat-containing protein | - |
| HMPREF0389_RS01880 () | 420759..422057 | - | 1299 | WP_014262047.1 | IS91 family transposase ISCARN110 | Transposase |
| HMPREF0389_RS01885 () | 422149..422448 | - | 300 | WP_014262048.1 | helix-turn-helix domain-containing protein | - |
| HMPREF0389_RS01890 () | 422944..423366 | - | 423 | WP_014262049.1 | sigma-70 family RNA polymerase sigma factor | - |
| HMPREF0389_RS01895 () | 423830..424429 | - | 600 | WP_014262050.1 | MptD family putative ECF transporter S component | - |
| HMPREF0389_RS01900 () | 424419..425906 | - | 1488 | WP_014262051.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HMPREF0389_RS01905 () | 425899..426603 | - | 705 | WP_014262052.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| HMPREF0389_RS01910 () | 426596..428335 | - | 1740 | WP_014262053.1 | ABC transporter ATP-binding protein/permease | - |
| HMPREF0389_RS01915 () | 428328..430073 | - | 1746 | WP_156775227.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HMPREF0389_RS01920 () | 430203..431183 | - | 981 | WP_014262055.1 | HTH-type transcriptional activator RhaR | VF |
| HMPREF0389_RS01925 () | 431527..432582 | - | 1056 | Protein_378 | IS30 family transposase ISCth3 | Transposase |
| HMPREF0389_RS08850 () | 432688..433902 | + | 1215 | WP_174254348.1 | transposase | - |
| HMPREF0389_RS01940 () | 434602..435999 | - | 1398 | WP_014262057.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HMPREF0389_RS01945 () | 436074..436355 | - | 282 | WP_014262058.1 | hypothetical protein | - |
| HMPREF0389_RS01950 () | 436425..436766 | - | 342 | WP_014262059.1 | mobilization protein | - |
| HMPREF0389_RS01955 () | 436807..438090 | - | 1284 | WP_169308509.1 | antirestriction protein ArdA | - |
| HMPREF0389_RS01960 () | 438228..438758 | - | 531 | WP_014262061.1 | DNA repair protein RadC | - |
| HMPREF0389_RS09070 () | 438755..438928 | - | 174 | WP_009531054.1 | hypothetical protein | - |
| HMPREF0389_RS01965 () | 439019..439306 | + | 288 | WP_014262062.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HMPREF0389_RS01970 () | 439306..439584 | + | 279 | WP_014262063.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HMPREF0389_RS08985 () | 439618..439779 | - | 162 | WP_156775228.1 | hypothetical protein | - |
| HMPREF0389_RS01975 () | 439779..440465 | - | 687 | WP_014262064.1 | DUF4366 domain-containing protein | - |
| HMPREF0389_RS01980 () | 440455..440694 | - | 240 | WP_014262065.1 | DUF4315 family protein | - |
| HMPREF0389_RS01985 () | 440716..442557 | - | 1842 | WP_014262066.1 | hypothetical protein | VF |
| HMPREF0389_RS01990 () | 442544..444943 | - | 2400 | WP_207635085.1 | conjugal transfer protein TraE | - |
| HMPREF0389_RS01995 () | 444963..445358 | - | 396 | WP_014262068.1 | PrgI family protein | - |
| HMPREF0389_RS02000 () | 445312..445932 | - | 621 | WP_014262069.1 | DNA methyltransferase | - |
| HMPREF0389_RS02005 () | 445944..446813 | - | 870 | WP_014262070.1 | hypothetical protein | - |
| HMPREF0389_RS02010 () | 446826..447041 | - | 216 | WP_034910652.1 | Maff2 family protein | - |
| HMPREF0389_RS02015 () | 447184..448944 | - | 1761 | WP_014262072.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HMPREF0389_RS02020 () | 448941..449423 | - | 483 | WP_014262073.1 | PcfB family protein | - |
| HMPREF0389_RS02025 () | 449408..450499 | - | 1092 | WP_014262074.1 | DNA cytosine methyltransferase | - |
| HMPREF0389_RS02030 () | 450486..450842 | - | 357 | WP_014262075.1 | hypothetical protein | - |
| HMPREF0389_RS02035 () | 450839..451543 | - | 705 | WP_156775281.1 | DUF3991 and toprim domain-containing protein | - |
| HMPREF0389_RS02040 () | 452221..452409 | - | 189 | WP_041250756.1 | hypothetical protein | - |
| HMPREF0389_RS02045 () | 452589..454310 | - | 1722 | WP_041250757.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HMPREF0389_RS02050 () | 454294..456048 | - | 1755 | WP_014262078.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HMPREF0389_RS02055 () | 456841..458250 | - | 1410 | WP_014262079.1 | CoA-binding protein | - |
| HMPREF0389_RS02060 () | 458251..459468 | - | 1218 | WP_014262080.1 | AsnC family transcriptional regulator | - |
| HMPREF0389_RS08695 () | 460612..460842 | - | 231 | WP_014262081.1 | hypothetical protein | - |
| HMPREF0389_RS02070 () | 460904..462694 | - | 1791 | WP_014262082.1 | S-layer homology domain-containing protein | - |
| HMPREF0389_RS02075 () | 463975..464748 | - | 774 | WP_014262083.1 | DUF695 domain-containing protein | - |
| HMPREF0389_RS02080 () | 464924..465784 | - | 861 | WP_014262084.1 | DUF2262 domain-containing protein | - |
| HMPREF0389_RS02085 () | 466185..467213 | - | 1029 | WP_014262085.1 | hypothetical protein | - |
| HMPREF0389_RS02090 () | 467535..468029 | - | 495 | WP_014262086.1 | hypothetical protein | - |
| HMPREF0389_RS02095 () | 468553..469272 | - | 720 | WP_041250759.1 | hypothetical protein | - |
| HMPREF0389_RS02100 () | 469793..470926 | + | 1134 | WP_041250760.1 | hypothetical protein | - |
| HMPREF0389_RS02105 () | 471013..471873 | - | 861 | WP_014262089.1 | MBL fold metallo-hydrolase | - |
| HMPREF0389_RS02110 () | 473962..474630 | - | 669 | WP_014262091.1 | type II-A CRISPR-associated protein Csn2 | - |
| HMPREF0389_RS02115 () | 474627..474932 | - | 306 | WP_014262092.1 | CRISPR-associated endonuclease Cas2 | - |
| HMPREF0389_RS02120 () | 474937..475815 | - | 879 | WP_014262093.1 | type II CRISPR-associated endonuclease Cas1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|