MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 146417 bp
Accession: NC_016445 Location: 78146..224562 Organism: Vibrio cholerae O1 str. 2010EL-1786 Replicon: chromosome
Accession: NC_016445 Location: 78146..224562 Organism: Vibrio cholerae O1 str. 2010EL-1786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HJ37_RS00290 () | 73166..73573 | + | 408 | WP_000887847.1 | MarR family transcriptional regulator | - |
| HJ37_RS00295 () | 73620..74957 | + | 1338 | WP_000981941.1 | sodium-coupled multidrug efflux MATE transporter VcrM | - |
| HJ37_RS00300 () | 75010..75888 | - | 879 | WP_000872504.1 | U32 family peptidase | - |
| HJ37_RS00305 () | 75900..76913 | - | 1014 | WP_000421327.1 | U32 family peptidase | - |
| HJ37_RS00310 () | 77021..79075 | - | 2055 | WP_001111411.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| HJ37_RS00315 () | 79308..79835 | + | 528 | WP_000932672.1 | SCP2 domain-containing protein | - |
| HJ37_RS00320 () | 79819..80322 | + | 504 | WP_000908540.1 | N-acetyltransferase | - |
| HJ37_RS00325 () | 80433..80840 | + | 408 | WP_000953212.1 | DNA polymerase III subunit psi | - |
| HJ37_RS00330 () | 80837..81286 | + | 450 | WP_000214238.1 | Ribosomal-protein-alanine acetyltransferase | VF |
| HJ37_RS00335 () | 81275..83332 | - | 2058 | WP_000160066.1 | putative signaling protein | VF |
| HJ37_RS18965 () | 83536..83634 | + | 99 | WP_001910883.1 | hypothetical protein | - |
| HJ37_RS00340 () | 84073..84261 | + | 189 | WP_000127615.1 | hypothetical protein | - |
| HJ37_RS00345 () | 84407..86425 | + | 2019 | WP_000211147.1 | ATP-binding protein | - |
| HJ37_RS00350 () | 86555..87796 | - | 1242 | WP_001218618.1 | Prophage integrase IntS ; Integrase | Integrase |
| HJ37_RS00355 () | 87798..88067 | - | 270 | WP_001995600.1 | hypothetical protein | - |
| HJ37_RS00360 () | 88070..89044 | - | 975 | WP_000497807.1 | ParM/StbA family protein | - |
| HJ37_RS00365 () | 89509..89952 | + | 444 | WP_000348524.1 | hypothetical protein | - |
| HJ37_RS00370 () | 89963..91006 | - | 1044 | Protein_70 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HJ37_RS00375 () | 91410..91988 | + | 579 | Protein_71 | Tn3 family transposase TnpA_IS3000 | Transposase |
| HJ37_RS00380 () | 92126..95104 | + | 2979 | WP_000985631.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| HJ37_RS00390 () | 95522..97015 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| HJ37_RS00395 () | 97046..97930 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HJ37_RS00400 () | 98147..99361 | + | 1215 | WP_000214119.1 | Bicyclomycin resistance protein | ARG |
| HJ37_RS00405 () | 99389..99694 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HJ37_RS00410 () | 99806..100210 | + | 405 | Protein_77 | IS91 family transposase ISPps1 | Transposase |
| HJ37_RS00415 () | 100317..101153 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HJ37_RS00420 () | 101153..101956 | - | 804 | WP_001082316.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HJ37_RS00425 () | 102017..102832 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HJ37_RS00430 () | 103303..104610 | + | 1308 | Protein_81 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| HJ37_RS00435 () | 104647..105858 | - | 1212 | WP_001122813.1 | IS256 family transposase ISSod18 | Transposase |
| HJ37_RS00440 () | 105919..106419 | - | 501 | Protein_83 | site-specific integrase | - |
| HJ37_RS00445 () | 106608..106841 | - | 234 | Protein_84 | DNA polymerase V subunit UmuC | - |
| HJ37_RS00450 () | 106849..107298 | - | 450 | WP_000116661.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HJ37_RS00455 () | 107297..107554 | + | 258 | WP_000182836.1 | hypothetical protein | - |
| HJ37_RS00460 () | 107938..108843 | + | 906 | WP_000196209.1 | DNA polymerase III subunit epsilon | - |
| HJ37_RS00465 () | 108931..109230 | + | 300 | WP_000284114.1 | hypothetical protein | - |
| HJ37_RS00470 () | 109548..110468 | + | 921 | WP_000180270.1 | WYL domain-containing protein | - |
| HJ37_RS00475 () | 110486..111286 | + | 801 | WP_000653856.1 | DUF1819 family protein | - |
| HJ37_RS00480 () | 111270..111818 | + | 549 | WP_001115853.1 | hypothetical protein | - |
| HJ37_RS00485 () | 111831..115520 | + | 3690 | WP_000152592.1 | BREX system P-loop protein BrxC | - |
| HJ37_RS00490 () | 115525..119265 | + | 3741 | WP_000779609.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| HJ37_RS00495 () | 119278..121581 | + | 2304 | WP_000567536.1 | PglZ domain-containing protein | - |
| HJ37_RS00500 () | 121620..123671 | + | 2052 | WP_000279702.1 | protease Lon-related BREX system protein BrxL | - |
| HJ37_RS00505 () | 123698..124468 | + | 771 | WP_000158025.1 | hypothetical protein | - |
| HJ37_RS00510 () | 124503..125318 | + | 816 | WP_001125250.1 | abortive infection family protein | - |
| HJ37_RS00515 () | 125440..127590 | + | 2151 | WP_000475916.1 | TraI domain-containing protein | - |
| HJ37_RS00520 () | 127639..129459 | + | 1821 | WP_000661888.1 | conjugative transfer system coupling protein TraD | - |
| HJ37_RS00525 () | 129469..130029 | + | 561 | WP_000546514.1 | hypothetical protein | - |
| HJ37_RS00530 () | 130016..130651 | + | 636 | WP_000033757.1 | DUF4400 domain-containing protein | - |
| HJ37_RS00535 () | 130678..131265 | - | 588 | WP_001167482.1 | hypothetical protein | - |
| HJ37_RS00545 () | 131554..131835 | + | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| HJ37_RS00550 () | 131832..132458 | + | 627 | WP_000667170.1 | hypothetical protein | - |
| HJ37_RS00555 () | 132442..133338 | + | 897 | WP_001911237.1 | type-F conjugative transfer system secretin TraK | - |
| HJ37_RS00560 () | 133341..134630 | + | 1290 | WP_000647305.1 | TraB/VirB10 family protein | - |
| HJ37_RS00565 () | 134705..135277 | + | 573 | WP_001944091.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HJ37_RS00570 () | 135274..135660 | + | 387 | WP_000180223.1 | hypothetical protein | - |
| HJ37_RS00575 () | 135881..136672 | + | 792 | WP_000095578.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| HJ37_RS00580 () | 136665..137603 | + | 939 | WP_000356587.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| HJ37_RS00585 () | 137735..138427 | + | 693 | WP_001228926.1 | DsbC family protein | - |
| HJ37_RS00590 () | 138427..140826 | + | 2400 | WP_000648042.1 | type IV secretion system protein TraC | - |
| HJ37_RS00595 () | 140819..141166 | + | 348 | WP_001044650.1 | hypothetical protein | - |
| HJ37_RS00600 () | 141150..141662 | + | 513 | WP_001166558.1 | S26 family signal peptidase | - |
| HJ37_RS00605 () | 141673..142797 | + | 1125 | WP_001189235.1 | hypothetical protein | - |
| HJ37_RS00610 () | 142781..143809 | + | 1029 | WP_000735886.1 | TraU family protein | - |
| HJ37_RS00615 () | 143812..147504 | + | 3693 | WP_000805082.1 | conjugal transfer protein TraN | - |
| HJ37_RS00620 () | 147595..149160 | - | 1566 | WP_001918292.1 | hypothetical protein | - |
| HJ37_RS00625 () | 149291..150046 | - | 756 | WP_000546748.1 | IS21 family transposase ISAlde2 | Transposase |
| HJ37_RS00630 () | 150036..151535 | - | 1500 | WP_001920874.1 | IS21 family transposase ISCte8 | Transposase |
| HJ37_RS00635 () | 151643..152659 | - | 1017 | WP_001918293.1 | ATP-binding protein | - |
| HJ37_RS00640 () | 152890..153573 | - | 684 | WP_001082313.1 | endonuclease | - |
| HJ37_RS00645 () | 153682..154284 | - | 603 | WP_000035785.1 | hypothetical protein | - |
| HJ37_RS00650 () | 154652..154978 | + | 327 | WP_000455723.1 | hypothetical protein | - |
| HJ37_RS00655 () | 154994..155413 | + | 420 | WP_000795985.1 | single-stranded DNA-binding protein | - |
| HJ37_RS00660 () | 155493..156311 | + | 819 | WP_000414662.1 | phage recombination protein Bet | - |
| HJ37_RS20140 () | 156393..156536 | + | 144 | WP_000167277.1 | hypothetical protein | - |
| HJ37_RS00665 () | 156597..157613 | + | 1017 | WP_000862956.1 | YqaJ viral recombinase family protein | - |
| HJ37_RS00670 () | 157823..158782 | + | 960 | WP_000139695.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| HJ37_RS00675 () | 158782..159549 | + | 768 | WP_000970189.1 | hypothetical protein | - |
| HJ37_RS00680 () | 159648..160601 | + | 954 | WP_000027441.1 | DUF3150 domain-containing protein | - |
| HJ37_RS00685 () | 160663..161103 | + | 441 | WP_001192023.1 | hypothetical protein | - |
| HJ37_RS00690 () | 161173..162828 | + | 1656 | WP_001016320.1 | VWA domain-containing protein | - |
| HJ37_RS00695 () | 162913..163410 | + | 498 | WP_000797297.1 | DNA repair protein RadC | - |
| HJ37_RS00700 () | 163410..163751 | + | 342 | WP_001081787.1 | hypothetical protein | - |
| HJ37_RS00705 () | 163842..164915 | + | 1074 | WP_001207590.1 | toprim domain-containing protein | - |
| HJ37_RS00710 () | 165005..165712 | + | 708 | WP_000989526.1 | hypothetical protein | - |
| HJ37_RS18975 () | 165984..166388 | + | 405 | WP_000023761.1 | VOC family protein | - |
| HJ37_RS00720 () | 166385..167086 | - | 702 | WP_001901434.1 | helix-turn-helix transcriptional regulator | - |
| HJ37_RS00725 () | 167186..167482 | - | 297 | WP_001919795.1 | DUF1801 domain-containing protein | - |
| HJ37_RS00730 () | 167619..168029 | - | 411 | WP_000592337.1 | helix-turn-helix transcriptional regulator | - |
| HJ37_RS00735 () | 168227..168622 | - | 396 | WP_000096366.1 | hypothetical protein | - |
| HJ37_RS00740 () | 168757..169230 | - | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| HJ37_RS00745 () | 169518..170477 | + | 960 | WP_000198593.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HJ37_RS00750 () | 170734..171678 | + | 945 | WP_001260107.1 | thioredoxin family protein | - |
| HJ37_RS00755 () | 171681..173069 | + | 1389 | WP_000755289.1 | conjugal transfer protein TraH | - |
| HJ37_RS00760 () | 173073..176642 | + | 3570 | WP_000263683.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HJ37_RS00765 () | 176675..177106 | - | 432 | WP_000183214.1 | hypothetical protein | - |
| HJ37_RS00770 () | 177164..177697 | - | 534 | WP_000566755.1 | hypothetical protein | - |
| HJ37_RS00775 () | 177694..177993 | - | 300 | WP_000210564.1 | flagellar transcriptional regulator FlhD | - |
| HJ37_RS00780 () | 177990..178538 | - | 549 | WP_000848909.1 | lytic transglycosylase domain-containing protein | - |
| HJ37_RS00785 () | 178525..179133 | - | 609 | WP_001918295.1 | hypothetical protein | - |
| HJ37_RS00790 () | 179174..180043 | - | 870 | WP_001205850.1 | hypothetical protein | - |
| HJ37_RS00795 () | 180099..180350 | - | 252 | WP_000451746.1 | helix-turn-helix domain-containing protein | - |
| HJ37_RS00800 () | 180468..181115 | + | 648 | WP_000854920.1 | LexA family transcriptional regulator | - |
| HJ37_RS00805 () | 181372..182961 | + | 1590 | WP_000013192.1 | peptide chain release factor 3 | - |
| HJ37_RS00810 () | 183083..184354 | - | 1272 | WP_000597951.1 | ATP-dependent RNA helicase SrmB | - |
| HJ37_RS00815 () | 184442..185164 | - | 723 | WP_000856169.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| HJ37_RS00820 () | 185473..186786 | + | 1314 | WP_000815019.1 | branched-chain amino acid transport system II carrier protein | - |
| HJ37_RS00825 () | 186956..188054 | + | 1099 | WP_010895430.1 | peptide chain release factor 2 | - |
| HJ37_RS00830 () | 188085..189617 | + | 1533 | WP_000128764.1 | lysine--tRNA ligase | - |
| HJ37_RS00835 () | 189891..191225 | + | 1335 | WP_000107102.1 | Transcriptional regulatory protein ZraR | VF |
| HJ37_RS00840 () | 191803..192054 | + | 252 | WP_001249919.1 | hypothetical protein | - |
| HJ37_RS00845 () | 192092..193126 | - | 1035 | WP_001200442.1 | NADP(H)-dependent aldo-keto reductase | - |
| HJ37_RS00850 () | 193343..194008 | - | 666 | WP_000801223.1 | DNA mismatch repair endonuclease MutH | - |
| HJ37_RS00860 () | 194639..195157 | + | 519 | WP_001911254.1 | RNA pyrophosphohydrolase | - |
| HJ37_RS00865 () | 195160..197406 | + | 2247 | WP_000952226.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| HJ37_RS00870 () | 197416..198210 | + | 795 | WP_001019422.1 | sulfite exporter TauE/SafE family protein | - |
| HJ37_RS00875 () | 198239..199054 | + | 816 | WP_001135560.1 | prolipoprotein diacylglyceryl transferase | - |
| HJ37_RS00880 () | 199064..199915 | + | 852 | WP_001250353.1 | thymidylate synthase | - |
| HJ37_RS00885 () | 200008..201156 | - | 1149 | WP_000609761.1 | Na/Pi cotransporter family protein | - |
| HJ37_RS00890 () | 201551..202441 | + | 891 | WP_000018876.1 | Transcriptional activator protein NhaR | VF |
| HJ37_RS00895 () | 202664..202966 | + | 303 | WP_001053149.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HJ37_RS00900 () | 203035..203295 | - | 261 | WP_000002742.1 | 30S ribosomal protein S20 | - |
| HJ37_RS00905 () | 203553..205115 | + | 1563 | WP_001911253.1 | murein biosynthesis integral membrane protein MurJ | - |
| HJ37_RS00910 () | 205184..206152 | + | 969 | WP_000420406.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| HJ37_RS00915 () | 206183..209032 | + | 2850 | WP_000006088.1 | isoleucine--tRNA ligase | - |
| HJ37_RS00920 () | 209048..209563 | + | 516 | WP_000071968.1 | Lipoprotein signal peptidase | VF |
| HJ37_RS00925 () | 209726..210160 | + | 435 | WP_001068088.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| HJ37_RS00930 () | 210195..211157 | + | 963 | WP_001883831.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| HJ37_RS00935 () | 211294..212778 | - | 1485 | WP_000964317.1 | carbon starvation protein A | - |
| HJ37_RS00940 () | 213031..213372 | + | 342 | WP_001883835.1 | DUF2799 domain-containing protein | - |
| HJ37_RS00945 () | 213391..215187 | + | 1797 | WP_000544193.1 | sodium:proton antiporter | - |
| HJ37_RS00950 () | 215211..216134 | - | 924 | WP_000180252.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| HJ37_RS00955 () | 216152..217264 | - | 1113 | WP_000840717.1 | anhydro-N-acetylmuramic acid kinase | - |
| HJ37_RS00960 () | 217370..218362 | + | 993 | WP_000529115.1 | beta-N-acetylhexosaminidase | - |
| HJ37_RS00965 () | 218389..219102 | - | 714 | WP_000947378.1 | Transcriptional regulatory protein BtsR | VF |
| HJ37_RS00970 () | 219112..220788 | - | 1677 | WP_000364257.1 | Sensor histidine kinase BtsS | VF |
| HJ37_RS00975 () | 221030..222103 | + | 1074 | WP_000747937.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| HJ37_RS00980 () | 222116..223243 | + | 1128 | WP_000257629.1 | T-protein | VF |
| HJ37_RS00985 () | 223310..223681 | - | 372 | WP_000570783.1 | PilZ domain-containing protein | - |
| HJ37_RS00990 () | 223852..225519 | - | 1668 | WP_000852865.1 | energy-dependent translational throttle protein EttA | - |
| HJ37_RS00995 () | 225881..227827 | + | 1947 | WP_000197615.1 | murein transglycosylase | - |
| HJ37_RS01000 () | 227882..228193 | + | 312 | WP_000250616.1 | trp operon repressor | - |
| HJ37_RS01005 () | 228271..228795 | - | 525 | WP_001226222.1 | inosine/xanthosine triphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|