MGE detailed information
MGE type: Genomic_island MGE length: 17555 bp
Accession: NC_016147 Location: 1670013..1687567 Organism: Pseudoxanthomonas spadix BD-a59 Replicon: chromosome
Accession: NC_016147 Location: 1670013..1687567 Organism: Pseudoxanthomonas spadix BD-a59 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSC_RS07400 () | 1665569..1666981 | + | 1413 | WP_043290464.1 | replicative DNA helicase | - |
| DSC_RS07405 () | 1667063..1668478 | + | 1416 | WP_014160533.1 | DNA photolyase family protein | - |
| DSC_RS07410 () | 1668596..1669291 | + | 696 | WP_043290465.1 | OmpA family protein | - |
| DSC_RS07415 () | 1669506..1669982 | - | 477 | WP_014160535.1 | hypothetical protein | - |
| DSC_RS07420 () | 1670013..1671263 | + | 1251 | WP_043290467.1 | TolC family protein | - |
| DSC_RS07425 () | 1671260..1672492 | + | 1233 | WP_014160537.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DSC_RS07430 () | 1672503..1675658 | + | 3156 | WP_043291083.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| DSC_RS07435 () | 1675914..1676999 | - | 1086 | WP_014160539.1 | aldo/keto reductase | - |
| DSC_RS07440 () | 1677011..1677517 | - | 507 | WP_014160540.1 | MarR family transcriptional regulator | - |
| DSC_RS07445 () | 1677514..1677939 | - | 426 | WP_014160541.1 | organic hydroperoxide resistance protein | - |
| DSC_RS07450 () | 1678027..1678680 | + | 654 | WP_202944906.1 | glutathione S-transferase | - |
| DSC_RS07455 () | 1678722..1679390 | + | 669 | WP_014160543.1 | cupin domain-containing protein | - |
| DSC_RS07460 () | 1679543..1680130 | + | 588 | WP_014160544.1 | HTH-type transcriptional repressor NemR | VF |
| DSC_RS07465 () | 1680241..1681044 | + | 804 | WP_043290468.1 | dienelactone hydrolase family protein | - |
| DSC_RS07470 () | 1681293..1682195 | + | 903 | WP_014160546.1 | SDR family oxidoreductase | - |
| DSC_RS07475 () | 1682581..1683789 | - | 1209 | WP_014160547.1 | MFS transporter | - |
| DSC_RS16030 () | 1684459..1684768 | - | 310 | Protein_1516 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| DSC_RS07485 () | 1685052..1685384 | - | 333 | WP_014160549.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSC_RS07490 () | 1685381..1685632 | - | 252 | WP_043290469.1 | addiction module antitoxin | - |
| DSC_RS07495 () | 1685676..1685924 | - | 249 | WP_014160551.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DSC_RS07500 () | 1686103..1686387 | + | 285 | WP_014160552.1 | hypothetical protein | - |
| DSC_RS07505 () | 1686380..1686877 | - | 498 | WP_043290471.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DSC_RS07510 () | 1686874..1687164 | - | 291 | WP_043290472.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DSC_RS07515 () | 1687358..1687567 | - | 210 | WP_014160555.1 | hypothetical protein | - |
| DSC_RS07520 () | 1688301..1690787 | + | 2487 | WP_014160556.1 | S8 family serine peptidase | - |
| DSC_RS07525 () | 1690894..1691388 | - | 495 | WP_014160557.1 | SsrA-binding protein SmpB | - |
| DSC_RS07530 () | 1691458..1691886 | + | 429 | WP_014160558.1 | type II toxin-antitoxin system RatA family toxin | - |
| DSC_RS07535 () | 1691893..1692156 | + | 264 | WP_014160559.1 | RnfH family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|