MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 143622 bp
Accession: NC_016027 Location: 2457743..2601364 Organism: Gluconacetobacter medellinensis NBRC 3288 Replicon: chromosome
Accession: NC_016027 Location: 2457743..2601364 Organism: Gluconacetobacter medellinensis NBRC 3288 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GLX_RS16745 () | 2457542..2459230 | - | 1689 | WP_014106137.1 | recombinase family protein | - |
| GLX_RS16630 () | 2459266..2459691 | - | 426 | WP_014106138.1 | hypothetical protein | - |
| GLX_RS16635 () | 2459701..2459955 | - | 255 | WP_010667350.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| GLX_RS11620 () | 2460028..2460351 | - | 324 | WP_010667349.1 | hypothetical protein | - |
| GLX_RS11625 () | 2460592..2461854 | + | 1263 | WP_014106140.1 | sodium:proton antiporter | - |
| GLX_RS11630 () | 2461925..2462401 | + | 477 | WP_014106141.1 | DUF2840 domain-containing protein | - |
| GLX_RS17400 () | 2462877..2463122 | + | 246 | WP_081477899.1 | hypothetical protein | - |
| GLX_RS11635 () | 2463166..2465277 | + | 2112 | WP_014106142.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| GLX_RS11640 () | 2465440..2465856 | + | 417 | WP_014106143.1 | ribbon-helix-helix domain-containing protein | - |
| GLX_RS11645 () | 2466168..2467667 | + | 1500 | WP_148268593.1 | type I restriction-modification system subunit M | - |
| GLX_RS11650 () | 2467657..2468898 | + | 1242 | WP_014106145.1 | restriction endonuclease subunit S | - |
| GLX_RS11655 () | 2468900..2469586 | + | 687 | WP_014106146.1 | abortive infection family protein | - |
| GLX_RS11660 () | 2469583..2472726 | + | 3144 | WP_014106147.1 | type I restriction endonuclease subunit R | - |
| GLX_RS11665 () | 2472849..2474525 | - | 1677 | WP_014106148.1 | IS607 family transposase ISNma20 | Transposase |
| GLX_RS11675 () | 2475367..2476299 | + | 933 | WP_110096128.1 | iron-containing redox enzyme family protein | - |
| GLX_RS11680 () | 2476465..2477082 | + | 618 | WP_110096125.1 | hypothetical protein | VF |
| GLX_RS11685 () | 2477257..2479278 | + | 2022 | WP_014106152.1 | hypothetical protein | VF |
| GLX_RS11690 () | 2479275..2479727 | + | 453 | WP_014106153.1 | hypothetical protein | - |
| GLX_RS11695 () | 2479756..2480382 | - | 627 | WP_081477935.1 | MucR family transcriptional regulator | - |
| GLX_RS11700 () | 2481041..2482063 | + | 1023 | WP_014106155.1 | hypothetical protein | VF |
| GLX_RS11705 () | 2482060..2482416 | + | 357 | WP_110096126.1 | TrbC/VirB2 family protein | - |
| GLX_RS11710 () | 2482416..2482691 | + | 276 | WP_014106157.1 | VirB3 family type IV secretion system protein | - |
| GLX_RS11715 () | 2482705..2485137 | + | 2433 | WP_014106158.1 | conjugal transfer protein TrbE | - |
| GLX_RS11720 () | 2485134..2485883 | + | 750 | WP_014106159.1 | P-type conjugative transfer protein TrbJ | - |
| GLX_RS11725 () | 2485887..2487299 | + | 1413 | WP_014106160.1 | P-type conjugative transfer protein TrbL | - |
| GLX_RS11730 () | 2487299..2487982 | + | 684 | WP_041247840.1 | conjugal transfer protein TrbF | - |
| GLX_RS11735 () | 2487979..2488986 | + | 1008 | WP_014106162.1 | P-type conjugative transfer protein TrbG | - |
| GLX_RS11740 () | 2488983..2490206 | + | 1224 | WP_014106163.1 | hypothetical protein | VF |
| GLX_RS11745 () | 2490199..2490438 | + | 240 | WP_014106164.1 | DUF2274 domain-containing protein | - |
| GLX_RS11750 () | 2490533..2491426 | + | 894 | WP_014106165.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| GLX_RS11755 () | 2491423..2492382 | + | 960 | WP_014106166.1 | DMT family transporter | - |
| GLX_RS11760 () | 2492873..2493472 | + | 600 | WP_014106167.1 | glutathione S-transferase | - |
| GLX_RS11765 () | 2493636..2495723 | + | 2088 | WP_014106168.1 | ParB/RepB/Spo0J family partition protein | - |
| GLX_RS11770 () | 2495816..2496298 | + | 483 | WP_041247842.1 | hypothetical protein | - |
| GLX_RS11775 () | 2496288..2496650 | + | 363 | WP_014106170.1 | hypothetical protein | - |
| GLX_RS11780 () | 2496798..2497985 | + | 1188 | WP_014106171.1 | DUF932 domain-containing protein | - |
| GLX_RS11785 () | 2498067..2498477 | + | 411 | WP_014106172.1 | hypothetical protein | - |
| GLX_RS11790 () | 2498470..2499114 | + | 645 | WP_014106173.1 | hypothetical protein | - |
| GLX_RS18195 () | 2499131..2499919 | - | 789 | WP_014106174.1 | hypothetical protein | - |
| GLX_RS16640 () | 2499888..2500871 | - | 984 | WP_050856123.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GLX_RS18485 () | 2500852..2501283 | - | 432 | WP_025825773.1 | hypothetical protein | - |
| GLX_RS11805 () | 2501398..2501673 | - | 276 | WP_014106177.1 | HU family DNA-binding protein | - |
| GLX_RS11810 () | 2501870..2505250 | + | 3381 | WP_014106178.1 | strawberry notch family protein | - |
| GLX_RS11815 () | 2505323..2506387 | + | 1065 | WP_148268595.1 | toprim domain-containing protein | - |
| GLX_RS11820 () | 2506703..2507638 | + | 936 | WP_014106180.1 | DUF2493 domain-containing protein | - |
| GLX_RS11825 () | 2507663..2508511 | - | 849 | WP_041247387.1 | hypothetical protein | - |
| GLX_RS11830 () | 2509248..2509463 | + | 216 | WP_041247388.1 | hypothetical protein | - |
| GLX_RS11835 () | 2509482..2509805 | + | 324 | WP_014106183.1 | DUF736 domain-containing protein | - |
| GLX_RS18640 () | 2510145..2510291 | + | 147 | WP_014106184.1 | hypothetical protein | - |
| GLX_RS11840 () | 2510456..2510893 | + | 438 | WP_014106185.1 | hypothetical protein | - |
| GLX_RS11845 () | 2511326..2511820 | + | 495 | WP_148268675.1 | DUF2285 domain-containing protein | - |
| GLX_RS17410 () | 2512034..2512300 | + | 267 | WP_081477936.1 | helix-turn-helix domain-containing protein | - |
| GLX_RS11850 () | 2512309..2513124 | + | 816 | WP_048851148.1 | replication initiator protein A | - |
| GLX_RS11855 () | 2513217..2513618 | + | 402 | Protein_2356 | site-specific DNA-methyltransferase | - |
| GLX_RS11860 () | 2513615..2514091 | + | 477 | WP_014106189.1 | DUF2840 domain-containing protein | - |
| GLX_RS11865 () | 2514088..2514717 | + | 630 | WP_014106190.1 | S26 family signal peptidase | - |
| GLX_RS11870 () | 2514772..2515113 | + | 342 | WP_014106191.1 | DUF736 domain-containing protein | - |
| GLX_RS11875 () | 2515110..2515545 | + | 436 | Protein_2360 | hypothetical protein | - |
| GLX_RS11880 () | 2515590..2516054 | + | 465 | Protein_2361 | lytic transglycosylase domain-containing protein | - |
| GLX_RS11890 () | 2516500..2518242 | + | 1743 | WP_014106193.1 | VirD2 family relaxase/mobilization nuclease | - |
| GLX_RS11895 () | 2518644..2518937 | + | 294 | WP_025825768.1 | IS630 family transposase ISRm10-1 | Transposase |
| GLX_RS17415 () | 2519124..2521355 | + | 2232 | WP_158309233.1 | TonB-dependent siderophore receptor | - |
| GLX_RS17420 () | 2521625..2522323 | + | 699 | WP_014106195.1 | hypothetical protein | VF |
| GLX_RS17425 () | 2522585..2523292 | + | 708 | WP_014106196.1 | FadR family transcriptional regulator | - |
| GLX_RS11915 () | 2523311..2523706 | - | 396 | WP_014106197.1 | hypothetical protein | - |
| GLX_RS11920 () | 2523752..2524708 | - | 957 | WP_025825766.1 | LysR family transcriptional regulator | - |
| GLX_RS11925 () | 2524989..2526605 | + | 1617 | WP_197536209.1 | MFS transporter | - |
| GLX_RS11930 () | 2526737..2527663 | + | 927 | Protein_2370 | ferritin-like domain-containing protein | - |
| GLX_RS11935 () | 2527841..2528917 | + | 1077 | WP_014106201.1 | hypothetical protein | VF |
| GLX_RS11940 () | 2528904..2530496 | + | 1593 | WP_014106202.1 | efflux transporter outer membrane subunit | - |
| GLX_RS11945 () | 2530493..2531221 | + | 729 | WP_014106203.1 | hypothetical protein | - |
| GLX_RS17430 () | 2531432..2532037 | + | 606 | WP_035373518.1 | flavin reductase family protein | - |
| GLX_RS17435 () | 2532514..2533263 | - | 750 | WP_158309234.1 | MBL fold metallo-hydrolase | - |
| GLX_RS11960 () | 2533666..2534448 | + | 783 | WP_014106206.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GLX_RS11965 () | 2534465..2535793 | + | 1329 | WP_014106207.1 | phenylacetate--CoA ligase | - |
| GLX_RS11970 () | 2535911..2536885 | + | 975 | WP_197536210.1 | 1,2-phenylacetyl-CoA epoxidase subunit A | - |
| GLX_RS11975 () | 2536878..2537153 | + | 276 | WP_014106209.1 | 1,2-phenylacetyl-CoA epoxidase subunit B | - |
| GLX_RS11980 () | 2537164..2537919 | + | 756 | WP_014106210.1 | phenylacetate-CoA oxygenase subunit PaaC | - |
| GLX_RS17440 () | 2537919..2538455 | + | 537 | WP_081477903.1 | phenylacetate-CoA oxygenase subunit PaaJ | - |
| GLX_RS17445 () | 2538498..2539577 | + | 1080 | WP_158309235.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| GLX_RS17450 () | 2539724..2540212 | + | 489 | WP_014106213.1 | phenylacetic acid degradation protein paaN | - |
| GLX_RS11985 () | 2540390..2540761 | + | 372 | WP_197536198.1 | acyl-CoA thioesterase | - |
| GLX_RS11990 () | 2540779..2541915 | + | 1137 | WP_014106215.1 | acyl-CoA dehydrogenase family protein | - |
| GLX_RS17455 () | 2541951..2542931 | + | 981 | WP_014106216.1 | prephenate dehydratase | - |
| GLX_RS11995 () | 2543078..2544760 | + | 1683 | WP_025825741.1 | alpha-keto acid decarboxylase family protein | - |
| GLX_RS17460 () | 2544834..2545046 | + | 213 | WP_014106218.1 | IS5 family transposase ISAli12B | Transposase |
| GLX_RS12000 () | 2545494..2546522 | + | 1029 | WP_025825740.1 | IS110 family transposase ISMdi12 | Transposase |
| GLX_RS12005 () | 2546875..2547870 | + | 996 | WP_041247852.1 | IS481 family transposase ISBxe4 | Transposase |
| GLX_RS12010 () | 2547866..2548645 | + | 780 | Protein_2391 | IS5 family transposase ISMex35 | Transposase |
| GLX_RS17465 () | 2548939..2549526 | - | 588 | WP_158309236.1 | histidine phosphatase family protein | - |
| GLX_RS12020 () | 2549841..2550203 | + | 363 | WP_014106223.1 | helix-turn-helix domain-containing protein | - |
| GLX_RS17470 () | 2550338..2551543 | - | 1206 | WP_014106224.1 | MFS transporter | - |
| GLX_RS12025 () | 2551751..2552665 | - | 915 | WP_110096354.1 | LysR family transcriptional regulator | - |
| GLX_RS12030 () | 2552876..2554513 | + | 1638 | WP_014106226.1 | MFS transporter | - |
| GLX_RS12035 () | 2554609..2555601 | + | 993 | WP_081477937.1 | hypothetical protein | VF |
| GLX_RS12040 () | 2555588..2557039 | + | 1452 | WP_041247853.1 | efflux transporter outer membrane subunit | - |
| GLX_RS12045 () | 2557269..2557970 | - | 702 | WP_014106229.1 | pirin family protein | - |
| GLX_RS17475 () | 2558133..2559053 | + | 921 | WP_014106230.1 | hypothetical protein | VF |
| GLX_RS12050 () | 2559108..2559704 | - | 597 | WP_014106231.1 | NAD(P)H:quinone oxidoreductase | - |
| GLX_RS12055 () | 2560079..2560696 | - | 618 | WP_014106232.1 | YceI family protein | - |
| GLX_RS12060 () | 2561000..2562130 | + | 1131 | WP_014106233.1 | hypothetical protein | VF |
| GLX_RS12065 () | 2562155..2565298 | + | 3144 | WP_035352875.1 | hypothetical protein | VF |
| GLX_RS12070 () | 2565298..2566785 | + | 1488 | WP_014106235.1 | hypothetical protein | VF |
| GLX_RS16660 () | 2567058..2567669 | + | 612 | WP_048851167.1 | TetR/AcrR family transcriptional regulator | - |
| GLX_RS17480 () | 2568002..2568889 | - | 888 | WP_014106237.1 | LysR family transcriptional regulator | - |
| GLX_RS12085 () | 2569085..2570194 | + | 1110 | WP_014106238.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| GLX_RS17485 () | 2570388..2571044 | + | 657 | WP_148268597.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| GLX_RS12090 () | 2571094..2571990 | + | 897 | WP_014106240.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GLX_RS12095 () | 2572216..2572542 | - | 327 | WP_050856127.1 | hypothetical protein | - |
| GLX_RS12100 () | 2572815..2573039 | + | 225 | WP_010511771.1 | hypothetical protein | Antitoxin Detail |
| GLX_RS12105 () | 2573040..2573450 | + | 411 | WP_014106242.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| GLX_RS18490 () | 2573607..2573786 | + | 180 | WP_158309237.1 | hypothetical protein | - |
| GLX_RS17490 () | 2573750..2573881 | + | 132 | Protein_2415 | IS3 family transposase | - |
| GLX_RS12115 () | 2574258..2575193 | + | 936 | WP_014106243.1 | hypothetical protein | VF |
| GLX_RS12120 () | 2575249..2577588 | + | 2340 | WP_014106244.1 | hypothetical protein | VF |
| GLX_RS12125 () | 2577691..2578929 | + | 1239 | WP_014106245.1 | cation:dicarboxylase symporter family transporter | - |
| GLX_RS12130 () | 2578963..2579994 | + | 1032 | WP_014106246.1 | hypothetical protein | VF |
| GLX_RS12135 () | 2580054..2580839 | + | 786 | Protein_2420 | hypothetical protein | - |
| GLX_RS12140 () | 2581170..2581889 | - | 720 | WP_041247856.1 | hypothetical protein | VF |
| GLX_RS12145 () | 2581921..2582109 | - | 189 | WP_014106250.1 | hypothetical protein | - |
| GLX_RS12150 () | 2582141..2583088 | - | 948 | WP_041247400.1 | hypothetical protein | VF |
| GLX_RS12155 () | 2583262..2584131 | - | 870 | WP_014106252.1 | protein deglycase HchA | - |
| GLX_RS12160 () | 2584403..2584945 | + | 543 | WP_014106253.1 | GNAT family N-acetyltransferase | - |
| GLX_RS12165 () | 2585033..2585827 | - | 795 | WP_014106254.1 | NAD(P)H-dependent oxidoreductase | - |
| GLX_RS12170 () | 2585931..2586848 | + | 918 | WP_014106255.1 | LysR family transcriptional regulator | - |
| GLX_RS12175 () | 2587310..2588389 | - | 1080 | WP_014104060.1 | IS5 family transposase ISMex35 | Transposase |
| GLX_RS12180 () | 2588408..2589064 | - | 657 | WP_014106257.1 | glutathione S-transferase | - |
| GLX_RS12185 () | 2589356..2590615 | + | 1260 | WP_014106258.1 | MFS transporter | - |
| GLX_RS12190 () | 2590612..2591865 | + | 1254 | WP_014106259.1 | arsenic transporter | - |
| GLX_RS12195 () | 2591874..2592323 | - | 450 | WP_014106260.1 | MarR family transcriptional regulator | - |
| GLX_RS12200 () | 2592380..2593492 | + | 1113 | WP_041247401.1 | hypothetical protein | VF |
| GLX_RS12205 () | 2593619..2594443 | - | 825 | WP_014106262.1 | hypothetical protein | VF |
| GLX_RS12210 () | 2594631..2595830 | + | 1200 | WP_158309238.1 | FAD-dependent monooxygenase | - |
| GLX_RS12215 () | 2596216..2597586 | + | 1371 | WP_014106264.1 | hypothetical protein | - |
| GLX_RS18205 () | 2597735..2598717 | + | 983 | Protein_2437 | FAD-dependent monooxygenase | - |
| GLX_RS12225 () | 2598935..2599777 | - | 843 | WP_014106268.1 | hypothetical protein | VF |
| GLX_RS12230 () | 2599791..2600351 | - | 561 | WP_014106269.1 | hypothetical protein | VF |
| GLX_RS12235 () | 2600669..2601022 | + | 354 | WP_041247402.1 | hypothetical protein | - |
| GLX_RS12240 () | 2601047..2601658 | - | 612 | WP_050856130.1 | TetR/AcrR family transcriptional regulator | - |
| GLX_RS12245 () | 2601935..2603092 | + | 1158 | WP_014106272.1 | efflux RND transporter periplasmic adaptor subunit | - |
| GLX_RS12250 () | 2603105..2606224 | + | 3120 | WP_193360690.1 | efflux RND transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|