MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 17386 bp
Accession: NC_015976 Location: 3147318..3164703 Organism: Sphingobium sp. SYK-6 Replicon: chromosome
Accession: NC_015976 Location: 3147318..3164703 Organism: Sphingobium sp. SYK-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLG_RS14360 () | 3143622..3144113 | + | 492 | WP_014077217.1 | hypothetical protein | - |
| SLG_RS14365 () | 3144233..3145309 | + | 1077 | WP_014077218.1 | acyltransferase family protein | - |
| SLG_RS14370 () | 3145573..3146991 | + | 1419 | WP_014077219.1 | DEAD/DEAH box helicase | - |
| SLG_RS14385 () | 3147498..3148730 | + | 1233 | WP_014077220.1 | Prophage integrase IntS ; Integrase | Integrase |
| SLG_RS14390 () | 3148743..3148946 | - | 204 | WP_014077221.1 | AlpA family phage regulatory protein | - |
| SLG_RS14395 () | 3149504..3149866 | + | 363 | WP_014077222.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SLG_RS14400 () | 3149893..3150189 | + | 297 | WP_197535709.1 | XRE family transcriptional regulator | Antitoxin Detail |
| SLG_RS14405 () | 3150180..3150425 | - | 246 | WP_041392071.1 | conjugal transfer protein TraD | - |
| SLG_RS14410 () | 3150463..3150768 | - | 306 | WP_014077225.1 | conjugal transfer protein TraD | - |
| SLG_RS14415 () | 3150943..3153969 | + | 3027 | WP_014077226.1 | Ti-type conjugative transfer relaxase TraA | - |
| SLG_RS14420 () | 3153987..3154745 | + | 759 | WP_014077227.1 | hypothetical protein | - |
| SLG_RS14425 () | 3155100..3156344 | - | 1245 | WP_014077228.1 | TolC family protein | - |
| SLG_RS14430 () | 3156341..3156640 | - | 300 | WP_014077229.1 | DUF3240 family protein | - |
| SLG_RS14435 () | 3156633..3159704 | - | 3072 | WP_014077230.1 | efflux RND transporter permease subunit | - |
| SLG_RS14440 () | 3159712..3160839 | - | 1128 | WP_014077231.1 | efflux RND transporter periplasmic adaptor subunit | - |
| SLG_RS14445 () | 3160889..3161908 | - | 1020 | WP_014077232.1 | Sensor protein BasS | VF |
| SLG_RS14450 () | 3161905..3162579 | - | 675 | WP_014077233.1 | Transcriptional regulatory protein BasR | VF |
| SLG_RS14455 () | 3162728..3163429 | - | 702 | WP_014077234.1 | VIT family protein | - |
| SLG_RS14460 () | 3163476..3164024 | - | 549 | WP_041393436.1 | cytochrome b | - |
| SLG_RS14465 () | 3164933..3165364 | + | 432 | WP_014077236.1 | DUF1810 domain-containing protein | - |
| SLG_RS14470 () | 3165698..3166396 | + | 699 | WP_041392073.1 | hypothetical protein | - |
| SLG_RS14475 () | 3166682..3167773 | + | 1092 | WP_014077238.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|