MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 148801 bp
Accession: NC_015974 Location: 1..148801 Organism: Sphingobium sp. SYK-6 Replicon: plasmid pSLPG
Accession: NC_015974 Location: 1..148801 Organism: Sphingobium sp. SYK-6 Replicon: plasmid pSLPG
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLG_RS19395 () | 76..1164 | + | 1089 | WP_007688083.1 | replication initiation protein | - |
| SLG_RS19400 () | 1360..2562 | + | 1203 | WP_007688084.1 | AAA family ATPase | - |
| SLG_RS19405 () | 2610..3623 | + | 1014 | WP_013849890.1 | ParB/RepB/Spo0J family partition protein | - |
| SLG_RS19410 () | 3688..4038 | + | 351 | WP_007688086.1 | hypothetical protein | - |
| SLG_RS19415 () | 4083..4766 | - | 684 | WP_013041559.1 | RES family NAD+ phosphorylase | - |
| SLG_RS19420 () | 4766..5164 | - | 399 | WP_007686501.1 | MbcA/ParS/Xre antitoxin family protein | - |
| SLG_RS19425 () | 5261..6427 | - | 1167 | WP_007686500.1 | hypothetical protein | - |
| SLG_RS19430 () | 6574..7812 | + | 1239 | WP_014072599.1 | integrase | - |
| SLG_RS19435 () | 8159..8815 | - | 657 | Protein_8 | SDR family NAD(P)-dependent oxidoreductase | - |
| SLG_RS19445 () | 8869..9752 | + | 884 | Protein_9 | IS3 family transposase | - |
| SLG_RS19450 () | 9813..12782 | - | 2970 | WP_014072601.1 | Tn3 family transposase | - |
| SLG_RS19455 () | 12874..14292 | - | 1419 | WP_004213247.1 | mercury(II) reductase | - |
| SLG_RS21130 () | 14330..14659 | - | 330 | WP_004213249.1 | heavy-metal-associated domain-containing protein | - |
| SLG_RS19465 () | 14672..15067 | - | 396 | WP_014072602.1 | mercury transporter MerT | - |
| SLG_RS19470 () | 15144..15566 | + | 423 | WP_014072603.1 | helix-turn-helix domain-containing protein | - |
| SLG_RS19475 () | 15737..16297 | + | 561 | WP_004213255.1 | recombinase family protein | - |
| SLG_RS21575 () | 16359..16502 | - | 144 | Protein_16 | EamA family transporter | - |
| SLG_RS19480 () | 16512..16775 | - | 264 | WP_014072604.1 | hypothetical protein | - |
| SLG_RS19485 () | 16772..17614 | - | 843 | WP_014072605.1 | prolipoprotein diacylglyceryl transferase | - |
| SLG_RS19490 () | 17661..18047 | - | 387 | WP_014072606.1 | rhodanese-like domain-containing protein | - |
| SLG_RS19495 () | 18082..18831 | - | 750 | WP_014072607.1 | MBL fold metallo-hydrolase | - |
| SLG_RS19500 () | 18851..19630 | - | 780 | WP_014072608.1 | sulfite exporter TauE/SafE family protein | - |
| SLG_RS19505 () | 19634..20071 | - | 438 | WP_014072609.1 | membrane protein | - |
| SLG_RS19510 () | 20076..20501 | - | 426 | WP_041393786.1 | YeeE/YedE family protein | - |
| SLG_RS19515 () | 20504..20824 | - | 321 | WP_173385034.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| SLG_RS19520 () | 21072..22541 | + | 1470 | WP_014072612.1 | multicopper oxidase domain-containing protein | - |
| SLG_RS19525 () | 22650..23156 | + | 507 | WP_014072613.1 | DsrE family protein | - |
| SLG_RS19530 () | 23191..23958 | - | 768 | WP_041393782.1 | membrane protein | - |
| SLG_RS21140 () | 24236..25114 | - | 879 | WP_009824028.1 | AAA family ATPase | - |
| SLG_RS19540 () | 25041..26441 | - | 1401 | WP_004212864.1 | DDE-type integrase/transposase/recombinase | - |
| SLG_RS19545 () | 26633..27205 | + | 573 | WP_009824027.1 | recombinase family protein | - |
| SLG_RS19550 () | 27495..28697 | + | 1203 | WP_013039112.1 | aspartyl protease family protein | - |
| SLG_RS19555 () | 28691..29110 | - | 420 | WP_007406847.1 | helix-turn-helix domain-containing protein | - |
| SLG_RS19560 () | 29186..29812 | + | 627 | WP_004212870.1 | cation diffusion facilitator family transporter | - |
| SLG_RS19565 () | 29812..31779 | + | 1968 | WP_004212871.1 | FTR1 family protein | - |
| SLG_RS19570 () | 31853..32149 | + | 297 | WP_007406840.1 | hypothetical protein | - |
| SLG_RS19575 () | 32210..33487 | + | 1278 | WP_013039111.1 | TolC family protein | - |
| SLG_RS19580 () | 33487..34665 | + | 1179 | WP_004212877.1 | efflux RND transporter periplasmic adaptor subunit | - |
| SLG_RS19585 () | 34669..37914 | + | 3246 | WP_004212878.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| SLG_RS19590 () | 37968..38456 | + | 489 | WP_013849881.1 | SRPBCC domain-containing protein | - |
| SLG_RS19595 () | 38453..38830 | + | 378 | WP_009824022.1 | hypothetical protein | - |
| SLG_RS19600 () | 38878..39291 | + | 414 | WP_004212881.1 | hypothetical protein | - |
| SLG_RS19605 () | 39295..39981 | + | 687 | WP_004212882.1 | hypothetical protein | - |
| SLG_RS19610 () | 39978..40586 | + | 609 | WP_004212885.1 | cation diffusion facilitator family transporter | - |
| SLG_RS19615 () | 40583..43084 | + | 2502 | WP_004212886.1 | heavy metal translocating P-type ATPase | - |
| SLG_RS19620 () | 43081..43830 | + | 750 | WP_004212890.1 | HAD-IIB family hydrolase | - |
| SLG_RS19625 () | 44027..46918 | - | 2892 | WP_013849879.1 | Tn3 family transposase | - |
| SLG_RS19630 () | 47044..47664 | + | 621 | WP_008832583.1 | recombinase family protein | - |
| SLG_RS19635 () | 47661..48191 | + | 531 | WP_007686150.1 | GNAT family N-acetyltransferase | - |
| SLG_RS19640 () | 48258..49553 | - | 1296 | WP_013039108.1 | hypothetical protein | - |
| SLG_RS19645 () | 49802..50206 | - | 405 | WP_007406376.1 | copper-binding protein | - |
| SLG_RS19650 () | 50203..53346 | - | 3144 | WP_007406408.1 | efflux RND transporter permease subunit | - |
| SLG_RS19655 () | 53343..54833 | - | 1491 | WP_007406384.1 | efflux RND transporter periplasmic adaptor subunit | - |
| SLG_RS19660 () | 54830..56092 | - | 1263 | WP_013039107.1 | TolC family protein | - |
| SLG_RS19665 () | 56156..56413 | - | 258 | WP_007683334.1 | hypothetical protein | - |
| SLG_RS19670 () | 56491..56853 | - | 363 | WP_007406428.1 | hypothetical protein | - |
| SLG_RS19675 () | 57097..57453 | + | 357 | WP_004212653.1 | hypothetical protein | - |
| SLG_RS19680 () | 57594..58073 | + | 480 | WP_007406417.1 | heavy metal-responsive transcriptional regulator | - |
| SLG_RS19685 () | 58070..58291 | + | 222 | WP_007406426.1 | hypothetical protein | - |
| SLG_RS19690 () | 58351..58671 | + | 321 | WP_007406382.1 | hypothetical protein | - |
| SLG_RS19695 () | 58695..60605 | + | 1911 | WP_013039106.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| SLG_RS19700 () | 60605..61333 | + | 729 | WP_007406424.1 | hypothetical protein | - |
| SLG_RS19705 () | 61330..62052 | + | 723 | WP_007406380.1 | hypothetical protein | - |
| SLG_RS19710 () | 62039..62482 | + | 444 | WP_007683337.1 | DUF1622 domain-containing protein | - |
| SLG_RS19715 () | 62497..62937 | + | 441 | WP_007683338.1 | four-helix bundle copper-binding protein | - |
| SLG_RS19720 () | 63069..63359 | + | 291 | WP_013039105.1 | hypothetical protein | - |
| SLG_RS19725 () | 63900..64094 | + | 195 | WP_013039103.1 | hypothetical protein | - |
| SLG_RS19730 () | 64537..66057 | + | 1521 | WP_007683341.1 | aldehyde dehydrogenase | - |
| SLG_RS19735 () | 66084..67109 | + | 1026 | WP_007683342.1 | alcohol dehydrogenase AdhP | - |
| SLG_RS19740 () | 67135..68841 | + | 1707 | WP_007683343.1 | copper resistance system multicopper oxidase | - |
| SLG_RS19745 () | 68838..69824 | + | 987 | WP_009823975.1 | copper resistance protein B | - |
| SLG_RS19750 () | 69818..71059 | + | 1242 | WP_007683345.1 | MFS transporter | - |
| SLG_RS19755 () | 71139..71576 | + | 438 | WP_007683347.1 | metal-binding protein | - |
| SLG_RS19760 () | 71961..72224 | + | 264 | WP_004212689.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| SLG_RS19765 () | 72211..72492 | + | 282 | WP_004212690.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| SLG_RS19770 () | 72858..73208 | + | 351 | WP_007683352.1 | magnesium transporter | - |
| SLG_RS19775 () | 73271..73678 | - | 408 | WP_007683354.1 | response regulator | - |
| SLG_RS19780 () | 73760..74383 | - | 624 | WP_007683357.1 | response regulator transcription factor | - |
| SLG_RS19785 () | 74373..75908 | - | 1536 | WP_007683359.1 | PAS domain S-box protein | - |
| SLG_RS19790 () | 75967..76440 | - | 474 | WP_007683361.1 | DUF305 domain-containing protein | - |
| SLG_RS19795 () | 76531..77679 | - | 1149 | WP_007683363.1 | copper resistance protein B | - |
| SLG_RS19800 () | 77679..79604 | - | 1926 | WP_007683365.1 | copper resistance system multicopper oxidase | - |
| SLG_RS19805 () | 79671..80237 | - | 567 | WP_007683367.1 | RNA polymerase sigma factor | - |
| SLG_RS19810 () | 80234..80674 | - | 441 | WP_007683368.1 | periplasmic heavy metal sensor | - |
| SLG_RS19815 () | 80674..80946 | - | 273 | WP_007683370.1 | hypothetical protein | - |
| SLG_RS19820 () | 81080..81457 | + | 378 | WP_007683372.1 | copper homeostasis periplasmic binding protein CopC | - |
| SLG_RS19825 () | 81462..82406 | + | 945 | WP_007683373.1 | copper homeostasis membrane protein CopD | - |
| SLG_RS19830 () | 82801..85158 | + | 2358 | WP_007683374.1 | heavy metal translocating P-type ATPase | - |
| SLG_RS19835 () | 85155..85553 | + | 399 | WP_004212744.1 | Cu(I)-responsive transcriptional regulator | - |
| SLG_RS19840 () | 85580..86215 | - | 636 | WP_007683376.1 | response regulator transcription factor | - |
| SLG_RS19845 () | 86778..87686 | - | 909 | WP_007683377.1 | ribose-phosphate pyrophosphokinase | - |
| SLG_RS19850 () | 87683..89221 | - | 1539 | WP_007683378.1 | thymidine phosphorylase family protein | - |
| SLG_RS19855 () | 89218..90666 | - | 1449 | WP_013849921.1 | MBL fold/beta-CASP domain-containing RNA metallo-hydrolase | - |
| SLG_RS19860 () | 90919..91182 | + | 264 | WP_007683380.1 | DUF2933 domain-containing protein | - |
| SLG_RS19865 () | 91179..92033 | + | 855 | WP_007683381.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| SLG_RS21165 () | 91968..92537 | - | 570 | WP_013039076.1 | hypothetical protein | - |
| SLG_RS19875 () | 92759..93520 | + | 762 | WP_007683383.1 | LuxR family transcriptional regulator | - |
| SLG_RS19880 () | 93534..94280 | + | 747 | WP_007683385.1 | LuxR family transcriptional regulator | - |
| SLG_RS19885 () | 94355..94966 | + | 612 | WP_007683387.1 | GNAT family N-acetyltransferase | - |
| SLG_RS19890 () | 94978..95910 | + | 933 | WP_007683389.1 | phytanoyl-CoA dioxygenase family protein | - |
| SLG_RS19895 () | 95974..96312 | + | 339 | WP_009823965.1 | hypothetical protein | - |
| SLG_RS19900 () | 96309..96974 | + | 666 | WP_007683393.1 | lytic transglycosylase domain-containing protein | - |
| SLG_RS19905 () | 96971..97309 | + | 339 | WP_007683396.1 | TrbC/VirB2 family protein | - |
| SLG_RS19910 () | 97306..97656 | + | 351 | WP_007683398.1 | VirB3 family type IV secretion system protein | - |
| SLG_RS19915 () | 97643..100060 | + | 2418 | WP_007683400.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| SLG_RS19920 () | 100064..100777 | + | 714 | WP_007683402.1 | type IV secretion system protein | - |
| SLG_RS21875 () | 100774..100992 | + | 219 | WP_150132838.1 | EexN family lipoprotein | - |
| SLG_RS19925 () | 101014..101958 | + | 945 | WP_007683405.1 | type IV secretion system protein | - |
| SLG_RS19930 () | 102295..102993 | + | 699 | WP_007683408.1 | conjugal transfer protein TraJ | - |
| SLG_RS19935 () | 102990..103847 | + | 858 | WP_007683410.1 | P-type conjugative transfer protein VirB9 | - |
| SLG_RS19940 () | 103851..105068 | + | 1218 | WP_014072617.1 | type IV secretion system protein VirB10 | - |
| SLG_RS19945 () | 105072..106076 | + | 1005 | WP_007683413.1 | P-type DNA transfer ATPase VirB11 | - |
| SLG_RS19950 () | 106060..108024 | + | 1965 | WP_007683415.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SLG_RS21175 () | 108014..108898 | + | 885 | WP_073507149.1 | DNA transfer protein | - |
| SLG_RS19955 () | 108978..111269 | + | 2292 | Protein_114 | class I SAM-dependent DNA methyltransferase | - |
| SLG_RS19960 () | 111397..111780 | + | 384 | WP_041391853.1 | transposase | - |
| SLG_RS19965 () | 111777..112124 | + | 348 | WP_014072621.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| SLG_RS19970 () | 112186..113724 | + | 1539 | WP_014072622.1 | IS66 family transposase | - |
| SLG_RS19975 () | 113752..114936 | + | 1185 | WP_014072623.1 | hypothetical protein | - |
| SLG_RS19980 () | 115028..116281 | + | 1254 | WP_007683419.1 | DNA repair exonuclease | - |
| SLG_RS19985 () | 116284..119724 | + | 3441 | WP_007683421.1 | YhaN family protein | - |
| SLG_RS19990 () | 119884..121950 | + | 2067 | WP_007683423.1 | ATP-dependent endonuclease | - |
| SLG_RS19995 () | 121943..123715 | + | 1773 | WP_014072624.1 | ATP-dependent helicase | - |
| SLG_RS21965 () | 123840..123998 | + | 159 | WP_007683426.1 | hypothetical protein | - |
| SLG_RS20000 () | 124047..124250 | - | 204 | WP_007683427.1 | hypothetical protein | - |
| SLG_RS20005 () | 124514..125563 | - | 1050 | WP_007688041.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| SLG_RS20010 () | 125556..126140 | - | 585 | WP_041393783.1 | hypothetical protein | - |
| SLG_RS20015 () | 126333..127454 | - | 1122 | WP_007688043.1 | relaxase/mobilization nuclease domain-containing protein | - |
| SLG_RS20020 () | 127447..128007 | - | 561 | WP_007688044.1 | plasmid mobilization relaxosome protein MobC | - |
| SLG_RS20025 () | 128214..129161 | - | 948 | WP_007688045.1 | ParB/RepB/Spo0J family partition protein | - |
| SLG_RS20030 () | 129161..129925 | - | 765 | WP_007688046.1 | ParA family protein | - |
| SLG_RS21970 () | 129938..130114 | - | 177 | WP_007688055.1 | hypothetical protein | - |
| SLG_RS20035 () | 130306..130698 | - | 393 | WP_007688057.1 | DUF3768 domain-containing protein | - |
| SLG_RS21975 () | 130958..131308 | + | 351 | WP_066564291.1 | hypothetical protein | - |
| SLG_RS20045 () | 131447..131968 | - | 522 | WP_031295760.1 | hypothetical protein | - |
| SLG_RS20050 () | 132076..132240 | - | 165 | WP_007688065.1 | hypothetical protein | - |
| SLG_RS20055 () | 132546..132980 | + | 435 | WP_007688066.1 | hypothetical protein | - |
| SLG_RS20060 () | 133056..133463 | - | 408 | WP_007688067.1 | single-stranded DNA-binding protein | - |
| SLG_RS20065 () | 133871..134539 | - | 669 | WP_007688068.1 | hypothetical protein | - |
| SLG_RS20070 () | 134652..135593 | - | 942 | WP_007688069.1 | DUF2493 domain-containing protein | - |
| SLG_RS20075 () | 135941..136681 | - | 741 | WP_007688070.1 | arsenical resistance protein ArsH | - |
| SLG_RS20080 () | 136681..137112 | - | 432 | WP_007688071.1 | GNAT family N-acetyltransferase | - |
| SLG_RS20085 () | 137109..138176 | - | 1068 | WP_007688072.1 | ACR3 family arsenite efflux transporter | - |
| SLG_RS20090 () | 138173..138613 | - | 441 | WP_007688073.1 | arsenate reductase (glutaredoxin) | - |
| SLG_RS20095 () | 138610..139146 | - | 537 | WP_007688074.1 | arsenate reductase ArsC | - |
| SLG_RS20100 () | 139159..139497 | - | 339 | WP_013849891.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| SLG_RS20105 () | 139550..140473 | - | 924 | WP_007688077.1 | DUF1738 domain-containing protein | - |
| SLG_RS20110 () | 140566..142578 | - | 2013 | WP_007688079.1 | ParB/RepB/Spo0J family partition protein | - |
| SLG_RS20115 () | 142690..146889 | - | 4200 | WP_013041753.1 | strawberry notch family protein | - |
| SLG_RS20120 () | 146956..147822 | - | 867 | WP_007688081.1 | toprim domain-containing protein | - |
| SLG_RS20125 () | 147884..148210 | - | 327 | WP_007688082.1 | single-stranded DNA-binding protein | - |
| SLG_RS21180 () | 148290..148490 | + | 201 | WP_013041755.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|