MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 154704 bp
Accession: NC_015942 Location: 669683..824386 Organism: Acidithiobacillus ferrivorans SS3 Replicon: chromosome
Accession: NC_015942 Location: 669683..824386 Organism: Acidithiobacillus ferrivorans SS3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIFE_RS03100 () | 665059..665925 | + | 867 | WP_014028122.1 | xanthine dehydrogenase family protein subunit M | - |
| ACIFE_RS03105 () | 665929..666513 | + | 585 | WP_014028123.1 | ureidoglycolate lyase | - |
| ACIFE_RS03110 () | 666532..667623 | + | 1092 | WP_014028124.1 | ring-opening amidohydrolase | - |
| ACIFE_RS03115 () | 667620..668561 | + | 942 | WP_014028125.1 | XdhC family protein | - |
| ACIFE_RS03120 () | 668578..668778 | + | 201 | WP_014028126.1 | DUF4089 domain-containing protein | - |
| ACIFE_RS03125 () | 668775..670172 | + | 1398 | WP_014028127.1 | AtzE family amidohydrolase | - |
| ACIFE_RS03130 () | 670186..670572 | + | 387 | WP_014028128.1 | oxalurate catabolism protein HpxZ | - |
| ACIFE_RS03135 () | 670581..671189 | + | 609 | WP_014028129.1 | nucleotidyltransferase family protein | - |
| ACIFE_RS03140 () | 671186..672805 | + | 1620 | WP_014028130.1 | gamma-glutamyltransferase family protein | - |
| ACIFE_RS03145 () | 672839..673759 | - | 921 | WP_014028131.1 | LysR family transcriptional regulator | - |
| ACIFE_RS03150 () | 674034..676370 | + | 2337 | WP_014028132.1 | TonB-dependent receptor | - |
| ACIFE_RS03155 () | 676548..677921 | + | 1374 | WP_014028133.1 | cytosine permease | - |
| ACIFE_RS03160 () | 677918..678364 | + | 447 | WP_014028134.1 | cytidine deaminase | - |
| ACIFE_RS03165 () | 678741..679751 | + | 1011 | WP_014028135.1 | hypothetical protein | - |
| ACIFE_RS17025 () | 679911..682274 | + | 2364 | WP_014028136.1 | TonB-dependent receptor | - |
| ACIFE_RS03175 () | 682552..682875 | + | 324 | WP_041648467.1 | hypothetical protein | - |
| ACIFE_RS03180 () | 683229..685919 | + | 2691 | WP_190277959.1 | quinoprotein amine dehydrogenase, beta chain-like protein | - |
| ACIFE_RS03185 () | 686101..688215 | + | 2115 | WP_014028139.1 | type I restriction-modification system subunit M | - |
| ACIFE_RS03190 () | 688212..689414 | + | 1203 | WP_014028140.1 | restriction endonuclease subunit S | - |
| ACIFE_RS03195 () | 689489..690967 | + | 1479 | WP_014028141.1 | hypothetical protein | - |
| ACIFE_RS15795 () | 690967..691926 | + | 960 | WP_014028142.1 | AAA family ATPase | - |
| ACIFE_RS17030 () | 691904..692065 | + | 162 | WP_014028143.1 | hypothetical protein | - |
| ACIFE_RS03205 () | 692075..692296 | + | 222 | WP_014028144.1 | hypothetical protein | - |
| ACIFE_RS03210 () | 692379..693389 | + | 1011 | WP_014028145.1 | virulence RhuM family protein | - |
| ACIFE_RS03215 () | 693386..696622 | + | 3237 | WP_014028146.1 | type I restriction endonuclease subunit R | - |
| ACIFE_RS03220 () | 696822..697157 | - | 336 | WP_014028147.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ACIFE_RS03225 () | 697154..697369 | - | 216 | WP_014028148.1 | antitoxin MazE family protein | Antitoxin Detail |
| ACIFE_RS03230 () | 697640..698146 | - | 507 | WP_014028149.1 | hypothetical protein | - |
| ACIFE_RS03235 () | 698146..698478 | - | 333 | WP_014028150.1 | DUF3579 domain-containing protein | - |
| ACIFE_RS03240 () | 698543..699439 | - | 897 | WP_014028151.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| ACIFE_RS03245 () | 699519..700214 | - | 696 | WP_014028152.1 | DUF502 domain-containing protein | - |
| ACIFE_RS03250 () | 700287..701672 | - | 1386 | WP_041648472.1 | Transcriptional regulatory protein GlrR | VF |
| ACIFE_RS03255 () | 701674..702165 | - | 492 | WP_014028154.1 | hypothetical protein | - |
| ACIFE_RS03260 () | 702165..703649 | - | 1485 | WP_014028155.1 | Sensor histidine kinase QseE | VF |
| ACIFE_RS03265 () | 703924..705600 | - | 1677 | WP_014028156.1 | DNA repair protein RecN | VF |
| ACIFE_RS03270 () | 705600..706487 | - | 888 | WP_014028157.1 | NAD(+)/NADH kinase | - |
| ACIFE_RS03275 () | 706555..707292 | - | 738 | WP_014028158.1 | type III pantothenate kinase | - |
| ACIFE_RS03280 () | 707289..708230 | - | 942 | WP_014028159.1 | biotin--[acetyl-CoA-carboxylase] ligase | - |
| ACIFE_RS03285 () | 708211..709467 | - | 1257 | WP_014028160.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ACIFE_RS16105 () | 709685..709852 | - | 168 | WP_202796632.1 | hypothetical protein | - |
| ACIFE_RS03290 () | 709993..710838 | + | 846 | WP_014028161.1 | heteromeric transposase endonuclease subunit TnsA | - |
| ACIFE_RS03295 () | 710842..713049 | + | 2208 | WP_014028162.1 | Transposon Tn7 transposition protein TnsB ; Integrase | Integrase |
| ACIFE_RS03300 () | 713373..714779 | + | 1407 | WP_041648476.1 | glucose-6-phosphate dehydrogenase | - |
| ACIFE_RS03305 () | 715204..717714 | + | 2511 | WP_014028164.1 | heavy metal translocating P-type ATPase | - |
| ACIFE_RS03310 () | 717742..718137 | + | 396 | WP_014028165.1 | DUF302 domain-containing protein | - |
| ACIFE_RS03315 () | 718200..718406 | + | 207 | WP_014028166.1 | heavy-metal-associated domain-containing protein | - |
| ACIFE_RS03320 () | 718427..718672 | + | 246 | WP_014028167.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| ACIFE_RS03325 () | 718888..719745 | + | 858 | WP_014028168.1 | DUF4396 domain-containing protein | - |
| ACIFE_RS03330 () | 719851..720828 | - | 978 | WP_014028169.1 | IS1595 family transposase ISAcif2 | Transposase |
| ACIFE_RS03335 () | 721282..722142 | - | 861 | Protein_664 | MFS transporter | - |
| ACIFE_RS03340 () | 722218..722841 | - | 624 | WP_014028171.1 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| ACIFE_RS03345 () | 722980..726009 | + | 3030 | WP_014028172.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| ACIFE_RS16110 () | 726058..726204 | + | 147 | Protein_667 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| ACIFE_RS03350 () | 726404..726613 | + | 210 | WP_014028173.1 | hypothetical protein | - |
| ACIFE_RS03355 () | 726845..727699 | - | 855 | WP_014028174.1 | S-formylglutathione hydrolase | - |
| ACIFE_RS03360 () | 727699..728808 | - | 1110 | WP_014028175.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| ACIFE_RS03365 () | 728908..729492 | - | 585 | WP_014028176.1 | S-(hydroxymethyl)glutathione synthase | - |
| ACIFE_RS03370 () | 729948..731879 | - | 1932 | WP_041650371.1 | Acetoin catabolism regulatory protein | VF |
| ACIFE_RS03375 () | 732119..732568 | - | 450 | WP_014028178.1 | helix-turn-helix transcriptional regulator | - |
| ACIFE_RS16120 () | 732565..732750 | - | 186 | WP_081463222.1 | DUF4160 domain-containing protein | - |
| ACIFE_RS03380 () | 733190..733780 | - | 591 | WP_014028179.1 | hypothetical protein | - |
| ACIFE_RS03385 () | 733770..734918 | - | 1149 | WP_014028180.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ACIFE_RS03390 () | 734981..735889 | - | 909 | WP_014028181.1 | hypothetical protein | - |
| ACIFE_RS03395 () | 735882..736568 | - | 687 | WP_014028182.1 | hypothetical protein | - |
| ACIFE_RS03400 () | 736595..737152 | - | 558 | WP_014028183.1 | hypothetical protein | - |
| ACIFE_RS15800 () | 738057..739019 | + | 963 | WP_014028184.1 | antA/AntB antirepressor family protein | - |
| ACIFE_RS03410 () | 739160..739609 | + | 450 | WP_014028185.1 | hypothetical protein | - |
| ACIFE_RS03415 () | 739609..741876 | + | 2268 | WP_014028186.1 | Conjugal transfer protein TraG | VF |
| ACIFE_RS03420 () | 741985..743493 | + | 1509 | WP_014028187.1 | type II toxin-antitoxin system HipA family toxin YjjJ | - |
| ACIFE_RS03425 () | 744025..744813 | + | 789 | WP_014028188.1 | hypothetical protein | - |
| ACIFE_RS03430 () | 745359..746204 | - | 846 | WP_014028189.1 | hypothetical protein | - |
| ACIFE_RS03435 () | 746376..747482 | - | 1107 | WP_014028190.1 | J domain-containing protein | - |
| ACIFE_RS03440 () | 747621..748904 | - | 1284 | WP_014028191.1 | Y-family DNA polymerase | - |
| ACIFE_RS03445 () | 748912..749391 | - | 480 | WP_014028192.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ACIFE_RS03450 () | 749381..749620 | - | 240 | WP_014028193.1 | hypothetical protein | - |
| ACIFE_RS03455 () | 749718..750401 | - | 684 | WP_014028194.1 | SOS response-associated peptidase | - |
| ACIFE_RS03460 () | 750491..752674 | + | 2184 | WP_014028195.1 | ATP-dependent RecD-like DNA helicase | - |
| ACIFE_RS03465 () | 753040..753993 | - | 954 | WP_014028196.1 | DUF4238 domain-containing protein | - |
| ACIFE_RS16125 () | 754211..754390 | + | 180 | Protein_693 | HU family DNA-binding protein | - |
| ACIFE_RS03470 () | 754977..755480 | + | 504 | WP_041648482.1 | hypothetical protein | - |
| ACIFE_RS03475 () | 756389..756751 | + | 363 | WP_014028199.1 | roadblock/LC7 domain-containing protein | - |
| ACIFE_RS15805 () | 756918..757466 | + | 549 | WP_014028200.1 | hypothetical protein | - |
| ACIFE_RS03485 () | 757679..760336 | + | 2658 | WP_014028201.1 | putative signaling protein | VF |
| ACIFE_RS03490 () | 760336..760647 | + | 312 | WP_014028202.1 | P-II family nitrogen regulator | - |
| ACIFE_RS03495 () | 760775..761137 | + | 363 | WP_014028203.1 | roadblock/LC7 domain-containing protein | - |
| ACIFE_RS03500 () | 761168..761704 | + | 537 | WP_014028204.1 | hypothetical protein | - |
| ACIFE_RS03505 () | 761991..762710 | - | 720 | WP_041650391.1 | RES family NAD+ phosphorylase | - |
| ACIFE_RS03510 () | 762731..763123 | - | 393 | WP_014028206.1 | MbcA/ParS/Xre antitoxin family protein | - |
| ACIFE_RS03515 () | 763787..764203 | + | 417 | WP_041648486.1 | hypothetical protein | - |
| ACIFE_RS16645 () | 764310..764651 | + | 342 | WP_014028209.1 | hypothetical protein | - |
| ACIFE_RS03525 () | 764769..765632 | + | 864 | Protein_705 | hypothetical protein | - |
| ACIFE_RS03530 () | 765887..766363 | + | 477 | WP_041648493.1 | hypothetical protein | - |
| ACIFE_RS03535 () | 766873..770508 | + | 3636 | WP_202796633.1 | DNA-binding protein | - |
| ACIFE_RS03540 () | 770771..771145 | + | 375 | WP_014028215.1 | hypothetical protein | - |
| ACIFE_RS03545 () | 771099..771701 | + | 603 | WP_143217903.1 | hypothetical protein | - |
| ACIFE_RS03550 () | 772034..772276 | + | 243 | WP_014028217.1 | hypothetical protein | - |
| ACIFE_RS17260 () | 772590..773396 | + | 807 | WP_014028218.1 | hypothetical protein | - |
| ACIFE_RS03560 () | 773499..773774 | + | 276 | WP_014028219.1 | HU family DNA-binding protein | - |
| ACIFE_RS03565 () | 774012..774859 | + | 848 | Protein_713 | heteromeric transposase endonuclease subunit TnsA | - |
| ACIFE_RS03570 () | 775184..775762 | - | 579 | WP_014028223.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| ACIFE_RS15810 () | 775878..776543 | + | 666 | WP_143217803.1 | plasmid pRiA4b ORF-3 family protein | - |
| ACIFE_RS03580 () | 776543..777973 | + | 1431 | WP_014028225.1 | ISKra4 family transposase ISAfe13 | Transposase |
| ACIFE_RS03585 () | 777956..779563 | - | 1608 | WP_143217804.1 | protein-disulfide reductase DsbD | - |
| ACIFE_RS03590 () | 779607..780569 | - | 963 | WP_014028227.1 | AhpC/TSA family protein | - |
| ACIFE_RS03595 () | 780566..781165 | - | 600 | WP_071182352.1 | sigma-70 family RNA polymerase sigma factor | - |
| ACIFE_RS03600 () | 781232..781696 | - | 465 | WP_014028229.1 | DUF302 domain-containing protein | - |
| ACIFE_RS03610 () | 781957..783125 | + | 1169 | WP_087455007.1 | IS3 family transposase ISAfe17 | Transposase |
| ACIFE_RS15815 () | 783183..783686 | - | 504 | WP_014028230.1 | thioredoxin fold domain-containing protein | - |
| ACIFE_RS03620 () | 783808..784185 | - | 378 | WP_014028231.1 | DsrE family protein | - |
| ACIFE_RS03625 () | 784257..784970 | - | 714 | WP_014028232.1 | DNA-binding domain-containing protein | - |
| ACIFE_RS03630 () | 784963..785841 | - | 879 | WP_014028233.1 | DUF692 domain-containing protein | - |
| ACIFE_RS03635 () | 785942..786229 | - | 288 | WP_014028234.1 | DUF2282 domain-containing protein | - |
| ACIFE_RS03640 () | 786318..786806 | - | 489 | WP_014028235.1 | DoxX family protein | - |
| ACIFE_RS03645 () | 786856..787335 | - | 480 | WP_014028236.1 | hypothetical protein | - |
| ACIFE_RS03650 () | 787346..787630 | - | 285 | WP_014028237.1 | DUF2282 domain-containing protein | - |
| ACIFE_RS03655 () | 787808..788509 | - | 702 | WP_014028238.1 | hypothetical protein | - |
| ACIFE_RS03660 () | 788499..788966 | - | 468 | WP_014028239.1 | MerR family transcriptional regulator | - |
| ACIFE_RS03665 () | 788970..789191 | - | 222 | WP_014028240.1 | hypothetical protein | - |
| ACIFE_RS03670 () | 789343..789608 | + | 266 | Protein_733 | DUF1778 domain-containing protein | - |
| ACIFE_RS03675 () | 789593..790114 | + | 522 | Protein_734 | GNAT family N-acetyltransferase | - |
| ACIFE_RS16130 () | 790296..790421 | - | 126 | Protein_735 | pyridine nucleotide-disulfide oxidoreductase | - |
| ACIFE_RS03680 () | 790480..791478 | - | 999 | Protein_736 | VWA domain-containing protein | - |
| ACIFE_RS03685 () | 791920..793374 | - | 1455 | Protein_737 | VWA domain-containing protein | - |
| ACIFE_RS03690 () | 793384..794211 | - | 828 | WP_014028241.1 | AAA family ATPase | - |
| ACIFE_RS03695 () | 794477..794998 | - | 522 | WP_014028243.1 | TlpA family protein disulfide reductase | - |
| ACIFE_RS03700 () | 795049..795642 | - | 594 | WP_014028244.1 | histidine phosphatase family protein | - |
| ACIFE_RS03705 () | 795644..797293 | - | 1650 | WP_014028245.1 | glucose-6-phosphate isomerase | - |
| ACIFE_RS03710 () | 797326..798405 | - | 1080 | WP_014028246.1 | transaldolase | - |
| ACIFE_RS03715 () | 798424..799103 | - | 680 | Protein_743 | glucose-6-phosphate dehydrogenase | - |
| ACIFE_RS03720 () | 799221..800879 | - | 1659 | WP_014028247.1 | mercury(II) reductase | - |
| ACIFE_RS16135 () | 800916..801269 | - | 354 | WP_014028248.1 | cation transporter | - |
| ACIFE_RS03725 () | 801304..801627 | - | 324 | WP_041650440.1 | mercury transporter MerT | - |
| ACIFE_RS17035 () | 801942..802109 | - | 168 | Protein_747 | LysR family transcriptional regulator | - |
| ACIFE_RS03730 () | 802246..802851 | - | 606 | Protein_748 | DUF3417 domain-containing protein | - |
| ACIFE_RS03735 () | 802868..803872 | - | 1005 | WP_014028250.1 | 2-hydroxyacid dehydrogenase | - |
| ACIFE_RS03740 () | 803895..805190 | - | 1296 | WP_014028251.1 | phosphopyruvate hydratase | - |
| ACIFE_RS03745 () | 805202..806626 | - | 1425 | WP_041648509.1 | pyruvate kinase | - |
| ACIFE_RS03750 () | 806626..807546 | - | 921 | WP_014028253.1 | aldolase | - |
| ACIFE_RS03755 () | 807539..808936 | - | 1398 | WP_014028254.1 | FAD-dependent oxidoreductase | - |
| ACIFE_RS03760 () | 808951..811458 | - | 2508 | WP_014028255.1 | plasma-membrane proton-efflux P-type ATPase | - |
| ACIFE_RS03765 () | 811899..813149 | - | 1251 | WP_014028256.1 | 2-oxo acid dehydrogenase subunit E2 | - |
| ACIFE_RS03770 () | 813146..814138 | - | 993 | WP_014028257.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| ACIFE_RS03775 () | 814135..815199 | - | 1065 | WP_014028258.1 | dehydrogenase | - |
| ACIFE_RS03780 () | 815192..815542 | - | 351 | WP_014028259.1 | carboxymuconolactone decarboxylase family protein | - |
| ACIFE_RS03785 () | 815696..816463 | - | 768 | WP_143217800.1 | polyphosphate kinase 2 | - |
| ACIFE_RS03790 () | 816457..817662 | - | 1206 | WP_014028261.1 | phosphoglycerate kinase | - |
| ACIFE_RS03795 () | 817678..818694 | - | 1017 | WP_014028262.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| ACIFE_RS03800 () | 818897..819268 | - | 372 | Protein_762 | phosphoketolase | - |
| ACIFE_RS17040 () | 819447..819614 | + | 168 | WP_156103801.1 | hypothetical protein | - |
| ACIFE_RS03805 () | 819854..821920 | - | 2067 | WP_014028263.1 | Copper-exporting P-type ATPase B | VF |
| ACIFE_RS17045 () | 821936..822166 | - | 231 | WP_010642700.1 | hypothetical protein | - |
| ACIFE_RS16665 () | 822406..822626 | - | 221 | Protein_766 | class I SAM-dependent methyltransferase | - |
| ACIFE_RS03810 () | 822875..823225 | + | 351 | WP_014028333.1 | hypothetical protein | - |
| ACIFE_RS03815 () | 823319..824635 | + | 1317 | WP_014028266.1 | TolC family protein | - |
| ACIFE_RS03820 () | 824632..826068 | + | 1437 | WP_014028267.1 | efflux RND transporter periplasmic adaptor subunit | - |
| ACIFE_RS03825 () | 826061..829171 | + | 3111 | WP_014028268.1 | efflux RND transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|