MGE detailed information
MGE type: Genomic_island MGE length: 45043 bp
Accession: NC_015942 Location: 1898720..1943762 Organism: Acidithiobacillus ferrivorans SS3 Replicon: chromosome
Accession: NC_015942 Location: 1898720..1943762 Organism: Acidithiobacillus ferrivorans SS3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIFE_RS09155 () | 1893759..1893947 | - | 189 | WP_014029284.1 | hypothetical protein | - |
| ACIFE_RS09160 () | 1894294..1895247 | - | 954 | WP_014029285.1 | P-type conjugative transfer ATPase TrbB | - |
| ACIFE_RS09165 () | 1895355..1895801 | - | 447 | WP_014029286.1 | hypothetical protein | - |
| ACIFE_RS09170 () | 1895788..1895994 | - | 207 | WP_041649244.1 | hypothetical protein | - |
| ACIFE_RS09175 () | 1896042..1897892 | - | 1851 | WP_014029288.1 | DNA topoisomerase III | - |
| ACIFE_RS09180 () | 1897971..1898351 | - | 381 | WP_014029289.1 | hypothetical protein | - |
| ACIFE_RS09185 () | 1898720..1900459 | - | 1740 | WP_014029290.1 | DNA-directed RNA polymerase sigma-70 factor | - |
| ACIFE_RS09190 () | 1900973..1901773 | - | 801 | WP_014029291.1 | Fimbrial protein | VF |
| ACIFE_RS09195 () | 1901866..1902156 | - | 291 | WP_014029292.1 | hypothetical protein | - |
| ACIFE_RS09200 () | 1902289..1902600 | - | 312 | WP_014029293.1 | hypothetical protein | - |
| ACIFE_RS09205 () | 1902921..1903277 | - | 357 | WP_014029294.1 | hypothetical protein | - |
| ACIFE_RS09210 () | 1903380..1906070 | - | 2691 | WP_014029295.1 | DNA-directed DNA polymerase | - |
| ACIFE_RS09215 () | 1906311..1909079 | - | 2769 | WP_014029296.1 | DUF3854 domain-containing protein | - |
| ACIFE_RS09220 () | 1909841..1910065 | - | 225 | WP_014029297.1 | hypothetical protein | - |
| ACIFE_RS09225 () | 1910239..1910685 | + | 447 | WP_014029298.1 | hypothetical protein | - |
| ACIFE_RS09230 () | 1911276..1911626 | - | 351 | WP_202796659.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ACIFE_RS09235 () | 1911626..1911895 | - | 270 | WP_014029300.1 | AbrB family transcriptional regulator | Antitoxin Detail |
| ACIFE_RS09240 () | 1912225..1912731 | - | 507 | WP_014029301.1 | hypothetical protein | - |
| ACIFE_RS09245 () | 1912902..1913186 | + | 285 | WP_014029302.1 | hypothetical protein | - |
| ACIFE_RS09250 () | 1913286..1913540 | + | 255 | WP_014029303.1 | hypothetical protein | - |
| ACIFE_RS09255 () | 1913855..1914316 | + | 462 | WP_014029305.1 | hypothetical protein | - |
| ACIFE_RS09260 () | 1914363..1915361 | - | 999 | WP_014029306.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| ACIFE_RS09270 () | 1915628..1917277 | + | 1650 | WP_014029307.1 | relaxase/mobilization nuclease domain-containing protein | - |
| ACIFE_RS09275 () | 1917346..1917723 | + | 378 | WP_014029308.1 | hypothetical protein | - |
| ACIFE_RS09280 () | 1917893..1918186 | + | 294 | WP_014029309.1 | hypothetical protein | - |
| ACIFE_RS09285 () | 1918230..1918595 | + | 366 | WP_014029310.1 | hypothetical protein | - |
| ACIFE_RS17125 () | 1918610..1918771 | + | 162 | WP_014029311.1 | hypothetical protein | - |
| ACIFE_RS09290 () | 1918774..1919244 | + | 471 | WP_014029312.1 | hypothetical protein | - |
| ACIFE_RS09295 () | 1919310..1920626 | + | 1317 | WP_014029313.1 | hypothetical protein | - |
| ACIFE_RS15865 () | 1920693..1923122 | + | 2430 | WP_014029314.1 | DUF1738 domain-containing protein | - |
| ACIFE_RS09305 () | 1923125..1924228 | + | 1104 | WP_014029315.1 | hypothetical protein | - |
| ACIFE_RS09310 () | 1924225..1925775 | + | 1551 | WP_014029316.1 | hypothetical protein | - |
| ACIFE_RS09315 () | 1925874..1926473 | + | 600 | WP_014029317.1 | S26 family signal peptidase | - |
| ACIFE_RS09320 () | 1926470..1927042 | + | 573 | WP_014029318.1 | Type IV secretion system protein virB1 | VF |
| ACIFE_RS09325 () | 1927064..1927618 | + | 555 | WP_041649277.1 | hypothetical protein | - |
| ACIFE_RS09330 () | 1927743..1928126 | + | 384 | WP_014029320.1 | hypothetical protein | - |
| ACIFE_RS09335 () | 1928149..1929345 | + | 1197 | WP_014029321.1 | TraB family protein | - |
| ACIFE_RS09340 () | 1929364..1930158 | - | 795 | WP_014029322.1 | hypothetical protein | - |
| ACIFE_RS09345 () | 1930189..1931313 | - | 1125 | WP_014029323.1 | hypothetical protein | - |
| ACIFE_RS09350 () | 1931310..1934336 | - | 3027 | WP_014029324.1 | DEAD/DEAH box helicase family protein | - |
| ACIFE_RS09355 () | 1934342..1936249 | - | 1908 | WP_014029325.1 | site-specific DNA-methyltransferase | - |
| ACIFE_RS09360 () | 1936331..1937449 | - | 1119 | WP_014029326.1 | SIR2 family protein | - |
| ACIFE_RS16805 () | 1937478..1938242 | - | 765 | WP_014029327.1 | HNH endonuclease | - |
| ACIFE_RS09370 () | 1938260..1938730 | - | 471 | WP_014029328.1 | superinfection immunity protein | - |
| ACIFE_RS09375 () | 1938731..1941658 | - | 2928 | WP_014029329.1 | DEAD/DEAH box helicase | - |
| ACIFE_RS09380 () | 1941691..1942791 | - | 1101 | WP_014029330.1 | 50S ribosome-binding GTPase | - |
| ACIFE_RS09385 () | 1943223..1943762 | - | 540 | WP_014029331.1 | hypothetical protein | - |
| ACIFE_RS09390 () | 1943813..1944100 | - | 288 | WP_014029332.1 | integration host factor subunit alpha | - |
| ACIFE_RS16350 () | 1944201..1944365 | - | 165 | WP_081463253.1 | hypothetical protein | - |
| ACIFE_RS16810 () | 1944903..1945130 | - | 228 | WP_014029334.1 | hypothetical protein | - |
| ACIFE_RS09400 () | 1945279..1945635 | - | 357 | WP_014029335.1 | hypothetical protein | - |
| ACIFE_RS09405 () | 1945647..1945769 | - | 123 | WP_014029336.1 | HU family DNA-binding protein | - |
| ACIFE_RS09410 () | 1945848..1946174 | - | 327 | WP_014029337.1 | integration host factor subunit alpha | - |
| ACIFE_RS16355 () | 1946407..1946583 | - | 177 | WP_202796660.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ACIFE_RS09420 () | 1946623..1946901 | - | 279 | WP_014029338.1 | CopG family ribbon-helix-helix protein | - |
| ACIFE_RS09425 () | 1947258..1948580 | - | 1323 | WP_014029339.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|