MGE detailed information
MGE type: Genomic_island MGE length: 15197 bp
Accession: NC_015850 Location: 1182829..1198025 Organism: Acidithiobacillus caldus SM-1 Replicon: chromosome
Accession: NC_015850 Location: 1182829..1198025 Organism: Acidithiobacillus caldus SM-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATC_RS05850 () | 1178135..1179517 | + | 1383 | WP_041636993.1 | Flp pilus assembly complex ATPase component TadA | - |
| ATC_RS05855 () | 1179517..1180617 | + | 1101 | WP_014002693.1 | type II secretion system F family protein | - |
| ATC_RS05860 () | 1180654..1181130 | + | 477 | WP_014002694.1 | hypothetical protein | - |
| ATC_RS05865 () | 1181139..1182089 | + | 951 | WP_014002695.1 | Flp pilus assembly complex ATPase component TadA | - |
| ATC_RS16355 () | 1182319..1182816 | + | 498 | WP_148262197.1 | type IV pilus biogenesis protein PilM | - |
| ATC_RS15965 () | 1182829..1184343 | + | 1515 | WP_014002697.1 | hypothetical protein | VF |
| ATC_RS05875 () | 1184351..1184719 | - | 369 | WP_014002698.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| ATC_RS05880 () | 1184716..1184976 | - | 261 | WP_041636187.1 | type II toxin-antitoxin system HicA family toxin | - |
| ATC_RS05885 () | 1185481..1185873 | + | 393 | WP_014002699.1 | hypothetical protein | - |
| ATC_RS05890 () | 1185892..1186263 | + | 372 | WP_014002700.1 | VirB3 family type IV secretion system protein | - |
| ATC_RS17325 () | 1186266..1189769 | + | 3504 | WP_014002701.1 | Type IV secretion system protein virB4 | VF |
| ATC_RS05900 () | 1190048..1190242 | + | 195 | WP_014002702.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| ATC_RS05905 () | 1190239..1190640 | + | 402 | WP_004872948.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| ATC_RS05910 () | 1191076..1191909 | + | 834 | WP_004872944.1 | hypothetical protein | - |
| ATC_RS05915 () | 1192358..1192702 | + | 345 | WP_014002703.1 | hypothetical protein | - |
| ATC_RS05920 () | 1192699..1193295 | + | 597 | WP_041636194.1 | hypothetical protein | - |
| ATC_RS05925 () | 1193371..1194522 | + | 1152 | WP_041636196.1 | hypothetical protein | - |
| ATC_RS16360 () | 1194568..1194693 | + | 126 | Protein_1180 | HU family DNA-binding protein | - |
| ATC_RS05930 () | 1195040..1195774 | + | 735 | WP_041636199.1 | conjugal transfer protein TrbJ | - |
| ATC_RS05935 () | 1195784..1197685 | + | 1902 | WP_014002707.1 | P-type conjugative transfer protein TrbL | - |
| ATC_RS05940 () | 1197765..1198025 | + | 261 | WP_014002708.1 | hypothetical protein | - |
| ATC_RS05945 () | 1198177..1200771 | - | 2595 | WP_014002709.1 | DEAD/DEAH box helicase family protein | - |
| ATC_RS05950 () | 1200776..1202491 | - | 1716 | WP_014002710.1 | site-specific DNA-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|