MGE detailed information
MGE type: Prophage MGE length: 58127 bp
Accession: NC_015730 Location: 3671309..3729435 Organism: Roseobacter litoralis Och 149 Replicon: chromosome
Accession: NC_015730 Location: 3671309..3729435 Organism: Roseobacter litoralis Och 149 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RLO149_RS17550 () | 3666461..3667375 | + | 915 | WP_044025723.1 | LysR family transcriptional regulator | - |
| RLO149_RS17555 () | 3667613..3669988 | + | 2376 | WP_148264500.1 | HAMP domain-containing protein | - |
| RLO149_RS17565 () | 3670735..3671908 | + | 1174 | Protein_3457 | IS3 family transposase ISRosp1 | Transposase |
| RLO149_RS17570 () | 3671990..3672295 | + | 306 | WP_013963444.1 | hypothetical protein | - |
| RLO149_RS17575 () | 3672382..3672624 | + | 243 | WP_013963445.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RLO149_RS17580 () | 3672621..3673034 | + | 414 | WP_148264393.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RLO149_RS17585 () | 3673377..3673748 | + | 372 | WP_013963447.1 | GFA family protein | - |
| RLO149_RS17590 () | 3673988..3675346 | - | 1359 | WP_013963448.1 | ISKra4 family transposase ISRli1 | Transposase |
| RLO149_RS22950 () | 3675532..3676164 | - | 633 | WP_013963449.1 | GNAT family N-acetyltransferase | - |
| RLO149_RS17600 () | 3676498..3677520 | + | 1023 | WP_148264501.1 | autoinducer binding domain-containing protein | - |
| RLO149_RS17605 () | 3677732..3677941 | - | 210 | Protein_3465 | IS66 family transposase ISRel8 | Transposase |
| RLO149_RS23825 () | 3678245..3678409 | + | 165 | WP_158308131.1 | hypothetical protein | - |
| RLO149_RS17610 () | 3678399..3680486 | + | 2088 | WP_013963133.1 | Tn3 family transposase ISPsy42 | Transposase |
| RLO149_RS17615 () | 3680466..3681410 | - | 945 | WP_158308166.1 | IS66 family transposase ISRel8 | Transposase |
| RLO149_RS17620 () | 3681679..3681864 | - | 186 | WP_013963452.1 | hypothetical protein | - |
| RLO149_RS17625 () | 3682419..3683798 | - | 1380 | WP_013963453.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| RLO149_RS17640 () | 3684941..3685243 | + | 303 | WP_083825480.1 | helix-turn-helix domain-containing protein | - |
| RLO149_RS17645 () | 3685294..3685574 | + | 281 | Protein_3472 | IS66 family transposase ISPpa5 | Transposase |
| RLO149_RS17650 () | 3685637..3687013 | + | 1377 | Protein_3473 | IS66 family transposase ISPpa5 | Transposase |
| RLO149_RS17655 () | 3687044..3689131 | - | 2088 | WP_013963133.1 | Tn3 family transposase ISPsy42 | Transposase |
| RLO149_RS23830 () | 3689121..3689285 | - | 165 | WP_158308131.1 | hypothetical protein | - |
| RLO149_RS17660 () | 3689601..3689825 | + | 225 | Protein_3476 | IS66 family transposase ISPpa5 | Transposase |
| RLO149_RS17665 () | 3689911..3690401 | - | 491 | Protein_3477 | IS3 family transposase ISCc3 | Transposase |
| RLO149_RS22955 () | 3690648..3693191 | + | 2544 | WP_148264394.1 | hypothetical protein | VF |
| RLO149_RS17675 () | 3693391..3693600 | - | 210 | Protein_3479 | IS66 family transposase ISRel8 | Transposase |
| RLO149_RS23835 () | 3693904..3694068 | + | 165 | WP_158308131.1 | hypothetical protein | - |
| RLO149_RS17680 () | 3694058..3696145 | + | 2088 | WP_013963133.1 | Tn3 family transposase ISPsy42 | Transposase |
| RLO149_RS17685 () | 3696125..3697069 | - | 945 | WP_158308166.1 | IS66 family transposase ISRel8 | Transposase |
| RLO149_RS23275 () | 3697178..3697258 | + | 81 | Protein_3483 | IS200/IS605 family transposase | - |
| RLO149_RS23280 () | 3697332..3698150 | - | 819 | WP_013963460.1 | IS3 family transposase ISGdi11 | Transposase |
| RLO149_RS23635 () | 3698320..3698457 | - | 138 | Protein_3485 | transposase | - |
| RLO149_RS17705 () | 3698650..3699751 | + | 1102 | Protein_3486 | IS3 family transposase ISSisp1 | Transposase |
| RLO149_RS17710 () | 3700175..3701137 | - | 963 | WP_044025415.1 | autoinducer binding domain-containing protein | - |
| RLO149_RS23640 () | 3701473..3701805 | + | 333 | WP_148264395.1 | hypothetical protein | - |
| RLO149_RS23285 () | 3701711..3702472 | + | 762 | Protein_3489 | IS5 family transposase | - |
| RLO149_RS23290 () | 3703299..3703652 | + | 354 | Protein_3490 | transposase | - |
| RLO149_RS23920 () | 3703536..3703820 | - | 285 | WP_013963463.1 | hypothetical protein | - |
| RLO149_RS23645 () | 3703777..3703938 | + | 162 | WP_158308167.1 | hypothetical protein | - |
| RLO149_RS17730 () | 3703920..3705006 | + | 1087 | Protein_3493 | IS110 family transposase ISMdi12 | Transposase |
| RLO149_RS23840 () | 3705817..3705966 | + | 150 | WP_013963464.1 | hypothetical protein | - |
| RLO149_RS23295 () | 3706009..3706311 | - | 303 | WP_083825511.1 | integrase core domain-containing protein | - |
| RLO149_RS17740 () | 3706420..3707549 | + | 1130 | WP_148264396.1 | IS3 family transposase ISMch1 | Transposase |
| RLO149_RS17745 () | 3708703..3709347 | - | 645 | WP_013963469.1 | autoinducer synthetase-like protein | - |
| RLO149_RS17750 () | 3709725..3710864 | + | 1140 | WP_013963470.1 | helix-turn-helix domain-containing protein | - |
| RLO149_RS17755 () | 3711011..3711205 | - | 195 | Protein_3499 | transposase domain-containing protein | - |
| RLO149_RS17760 () | 3711416..3712582 | + | 1167 | WP_083825482.1 | IS66 family transposase ISPpa5 | Transposase |
| RLO149_RS17765 () | 3712576..3713577 | + | 1002 | WP_044025218.1 | Tyrosine recombinase XerC | VF |
| RLO149_RS17770 () | 3713705..3713935 | + | 231 | WP_013963471.1 | hypothetical protein | - |
| RLO149_RS17775 () | 3714047..3714226 | - | 180 | WP_013963472.1 | hypothetical protein | - |
| RLO149_RS17780 () | 3714283..3714468 | - | 186 | WP_013963473.1 | hypothetical protein | - |
| RLO149_RS17785 () | 3714919..3715107 | - | 189 | WP_044025419.1 | hypothetical protein | - |
| RLO149_RS17790 () | 3715194..3715499 | - | 306 | WP_013963475.1 | hypothetical protein | - |
| RLO149_RS17795 () | 3715650..3716258 | + | 609 | WP_083825483.1 | IS91 family transposase ISAzo26 | Transposase |
| RLO149_RS17800 () | 3716331..3717268 | - | 938 | Protein_3508 | Fic family protein | - |
| RLO149_RS23650 () | 3717298..3718339 | + | 1042 | Protein_3509 | IS3 family transposase | - |
| RLO149_RS23655 () | 3718333..3718613 | - | 281 | Protein_3510 | transposase | - |
| RLO149_RS17825 () | 3719789..3720325 | - | 537 | WP_013963479.1 | DnaJ domain-containing protein | - |
| RLO149_RS17830 () | 3720728..3722017 | - | 1290 | WP_013963481.1 | serine hydroxymethyltransferase | - |
| RLO149_RS17835 () | 3722058..3723029 | - | 972 | WP_044025732.1 | D-glycerate dehydrogenase | - |
| RLO149_RS17840 () | 3723029..3723916 | - | 888 | WP_013963483.1 | succinate--CoA ligase subunit alpha | - |
| RLO149_RS17845 () | 3723913..3725112 | - | 1200 | WP_013963484.1 | malate--CoA ligase subunit beta | - |
| RLO149_RS17850 () | 3725146..3726384 | - | 1239 | WP_013963485.1 | alanine--glyoxylate aminotransferase family protein | - |
| RLO149_RS17855 () | 3726633..3727256 | + | 624 | WP_044025733.1 | HTH-type transcriptional regulator MalT | VF |
| RLO149_RS17860 () | 3727337..3728314 | + | 978 | WP_013963487.1 | CoA ester lyase | - |
| RLO149_RS23845 () | 3728283..3728486 | + | 204 | WP_158308168.1 | hypothetical protein | - |
| RLO149_RS17865 () | 3728716..3729435 | + | 720 | WP_013963489.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| RLO149_RS17870 () | 3729432..3730223 | + | 792 | WP_013963490.1 | ABC transporter permease | - |
| RLO149_RS17880 () | 3730615..3732210 | + | 1596 | WP_013963492.1 | HAMP domain-containing histidine kinase | - |
| RLO149_RS17885 () | 3732221..3732901 | + | 681 | WP_013963493.1 | response regulator transcription factor | - |
| RLO149_RS17890 () | 3732998..3733105 | + | 108 | WP_011567425.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| RLO149_RS17895 () | 3733130..3734023 | + | 894 | WP_013963494.1 | pyrroloquinoline quinone biosynthesis protein PqqB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|