MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 111480 bp
Accession: NC_015593 Location: 933235..1044714 Organism: Sphingobium chlorophenolicum L-1 Replicon: chromosome
Accession: NC_015593 Location: 933235..1044714 Organism: Sphingobium chlorophenolicum L-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPHCH_RS04265 () | 928441..929373 | + | 933 | WP_013846803.1 | rod shape-determining protein MreC | - |
| SPHCH_RS04270 () | 929370..929897 | + | 528 | WP_013846804.1 | rod shape-determining protein MreD | - |
| SPHCH_RS04275 () | 929894..931972 | + | 2079 | WP_013846805.1 | penicillin-binding protein 2 | - |
| SPHCH_RS04280 () | 931969..933081 | + | 1113 | WP_013846806.1 | rod shape-determining protein RodA | - |
| SPHCH_RS04290 () | 933568..933783 | - | 216 | WP_013846807.1 | AlpA family phage regulatory protein | - |
| SPHCH_RS21935 () | 934150..934209 | - | 60 | WP_119035242.1 | hypothetical protein | - |
| SPHCH_RS04295 () | 934302..934985 | - | 684 | WP_013846808.1 | CerR family C-terminal domain-containing protein | - |
| SPHCH_RS04300 () | 935089..936087 | + | 999 | WP_013846809.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| SPHCH_RS04305 () | 936084..937883 | + | 1800 | WP_013846810.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| SPHCH_RS04310 () | 937880..939007 | + | 1128 | WP_013846811.1 | ABC transporter permease | - |
| SPHCH_RS04315 () | 939007..940143 | + | 1137 | WP_013846812.1 | ABC transporter permease | - |
| SPHCH_RS04320 () | 940161..941690 | + | 1530 | WP_013846813.1 | Toluene efflux pump outer membrane protein TtgF | VF |
| SPHCH_RS04325 () | 941750..942418 | - | 669 | WP_013846814.1 | MobA/MobL family protein | - |
| SPHCH_RS04330 () | 942465..942881 | - | 417 | WP_013846815.1 | helix-turn-helix domain-containing protein | - |
| SPHCH_RS04335 () | 943352..943636 | + | 285 | WP_126516764.1 | hypothetical protein | - |
| SPHCH_RS04340 () | 943623..944393 | + | 771 | WP_013846817.1 | DsbC family protein | - |
| SPHCH_RS04345 () | 944575..944892 | + | 318 | WP_013846818.1 | hypothetical protein | - |
| SPHCH_RS04350 () | 945029..945295 | + | 267 | WP_013846819.1 | membrane protein | - |
| SPHCH_RS04355 () | 945304..945942 | + | 639 | WP_013846820.1 | sex pilus assembly and synthesis protein | - |
| SPHCH_RS04360 () | 945926..946684 | + | 759 | WP_013846821.1 | type-F conjugative transfer system secretin TraK | - |
| SPHCH_RS04365 () | 946681..947994 | + | 1314 | WP_013846822.1 | TraB/VirB10 family protein | - |
| SPHCH_RS04370 () | 948030..948632 | + | 603 | WP_013846823.1 | TraV family lipoprotein | - |
| SPHCH_RS04375 () | 948629..951145 | + | 2517 | WP_013846824.1 | TraC family protein | - |
| SPHCH_RS04380 () | 951142..951468 | + | 327 | WP_013846825.1 | hypothetical protein | - |
| SPHCH_RS04385 () | 951465..951875 | + | 411 | WP_013846826.1 | hypothetical protein | - |
| SPHCH_RS04390 () | 951872..952381 | + | 510 | WP_147373619.1 | hypothetical protein | - |
| SPHCH_RS04395 () | 952378..952614 | + | 237 | WP_013846828.1 | hypothetical protein | - |
| SPHCH_RS04400 () | 952646..953269 | + | 624 | WP_119035243.1 | conjugal transfer protein TraW | - |
| SPHCH_RS04405 () | 953266..954282 | + | 1017 | WP_013846830.1 | TraU family protein | - |
| SPHCH_RS04410 () | 954602..956545 | + | 1944 | WP_013846831.1 | hypothetical protein | - |
| SPHCH_RS04415 () | 956542..957660 | + | 1119 | WP_013846832.1 | conjugal transfer protein TraN | - |
| SPHCH_RS04420 () | 957632..958513 | + | 882 | WP_013846833.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SPHCH_RS04425 () | 958485..959096 | + | 612 | WP_013846834.1 | S26 family signal peptidase | - |
| SPHCH_RS04430 () | 959093..959965 | + | 873 | WP_013846835.1 | conjugal transfer protein TraF | - |
| SPHCH_RS04435 () | 960001..960546 | + | 546 | WP_119035244.1 | hypothetical protein | - |
| SPHCH_RS04440 () | 960592..962016 | + | 1425 | WP_013846837.1 | conjugal transfer protein TraH | - |
| SPHCH_RS04445 () | 962031..965801 | + | 3771 | WP_013846838.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SPHCH_RS04450 () | 965798..966247 | - | 450 | WP_013846839.1 | hypothetical protein | - |
| SPHCH_RS04455 () | 966845..967198 | + | 354 | WP_013846840.1 | hypothetical protein | - |
| SPHCH_RS04460 () | 967412..968332 | - | 921 | WP_013846841.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| SPHCH_RS04465 () | 968337..969122 | - | 786 | WP_021690794.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| SPHCH_RS04470 () | 969316..970107 | - | 792 | WP_013846843.1 | LuxR family transcriptional regulator | - |
| SPHCH_RS04475 () | 970402..970938 | - | 537 | Protein_885 | ABC transporter permease | - |
| SPHCH_RS04480 () | 971030..972067 | - | 1038 | WP_013846844.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| SPHCH_RS04485 () | 972104..972937 | - | 834 | WP_013846845.1 | universal stress protein | - |
| SPHCH_RS04490 () | 973053..974051 | - | 999 | WP_030090322.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| SPHCH_RS04495 () | 974092..974502 | - | 411 | WP_013846847.1 | group II truncated hemoglobin | - |
| SPHCH_RS04500 () | 974550..974957 | - | 408 | WP_037446387.1 | Transcriptional regulatory protein TdiR | VF |
| SPHCH_RS04505 () | 975044..975658 | - | 615 | WP_013846849.1 | Transcriptional regulatory protein FixJ | VF |
| SPHCH_RS04510 () | 975648..977354 | - | 1707 | WP_081465158.1 | PAS domain S-box protein | - |
| SPHCH_RS04515 () | 978012..978506 | + | 495 | WP_013846851.1 | Spore protein SP21 | VF |
| SPHCH_RS04520 () | 978607..980067 | + | 1461 | WP_119034650.1 | bifunctional aminoglycoside phosphotransferase/ATP-binding protein | - |
| SPHCH_RS04525 () | 980140..980466 | - | 327 | WP_013846853.1 | TraR/DksA family transcriptional regulator | - |
| SPHCH_RS04530 () | 980521..980757 | - | 237 | WP_013846854.1 | hypothetical protein | - |
| SPHCH_RS04535 () | 980869..989280 | - | 8412 | WP_013846855.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| SPHCH_RS21290 () | 989284..990297 | - | 1014 | WP_013846856.1 | universal stress protein | - |
| SPHCH_RS04545 () | 990594..992975 | - | 2382 | WP_013846857.1 | phosphoenolpyruvate synthase | - |
| SPHCH_RS04550 () | 993541..994020 | - | 480 | WP_162849106.1 | hypothetical protein | VF |
| SPHCH_RS04555 () | 994095..994685 | - | 591 | WP_013846859.1 | restriction endonuclease | - |
| SPHCH_RS04560 () | 994695..997688 | - | 2994 | WP_013846860.1 | relaxase domain-containing protein | - |
| SPHCH_RS04565 () | 997685..999835 | - | 2151 | WP_013846861.1 | type IV secretion system DNA-binding domain-containing protein | - |
| SPHCH_RS04570 () | 1000008..1000307 | - | 300 | WP_013846862.1 | ribbon-helix-helix domain-containing protein | - |
| SPHCH_RS04575 () | 1000772..1001095 | + | 324 | WP_013846863.1 | hypothetical protein | - |
| SPHCH_RS04580 () | 1001260..1002285 | - | 1026 | WP_013846864.1 | DUF2493 domain-containing protein | - |
| SPHCH_RS04585 () | 1002369..1002842 | - | 474 | WP_013846865.1 | DUF736 domain-containing protein | - |
| SPHCH_RS21940 () | 1003418..1003654 | - | 237 | WP_062116437.1 | hypothetical protein | - |
| SPHCH_RS04595 () | 1003754..1004149 | + | 396 | WP_013846867.1 | hypothetical protein | - |
| SPHCH_RS22285 () | 1004443..1004592 | + | 150 | WP_013846868.1 | hypothetical protein | - |
| SPHCH_RS04600 () | 1004618..1005070 | - | 453 | WP_013846869.1 | type II toxin-antitoxin system VapC family toxin | - |
| SPHCH_RS04605 () | 1005067..1005381 | - | 315 | WP_013846870.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SPHCH_RS04610 () | 1005469..1006071 | - | 603 | WP_013846871.1 | hypothetical protein | - |
| SPHCH_RS22290 () | 1006306..1006482 | + | 177 | WP_013846872.1 | hypothetical protein | - |
| SPHCH_RS04620 () | 1006594..1007598 | - | 1005 | WP_013846873.1 | hypothetical protein | - |
| SPHCH_RS04630 () | 1008027..1009112 | - | 1086 | WP_013846875.1 | hypothetical protein | - |
| SPHCH_RS04635 () | 1009307..1009708 | - | 402 | WP_030538185.1 | hypothetical protein | - |
| SPHCH_RS04640 () | 1009760..1010029 | - | 270 | WP_143761318.1 | hypothetical protein | - |
| SPHCH_RS04645 () | 1010381..1010803 | - | 423 | WP_013846877.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| SPHCH_RS04650 () | 1010793..1011044 | - | 252 | WP_013846878.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| SPHCH_RS21295 () | 1011250..1011774 | - | 525 | WP_119034652.1 | hypothetical protein | - |
| SPHCH_RS04660 () | 1011897..1012445 | - | 549 | WP_013846880.1 | hypothetical protein | - |
| SPHCH_RS21945 () | 1012442..1012636 | - | 195 | WP_013846881.1 | hypothetical protein | - |
| SPHCH_RS04665 () | 1012665..1012853 | - | 189 | WP_013846882.1 | hypothetical protein | - |
| SPHCH_RS04670 () | 1012921..1013121 | - | 201 | WP_013846883.1 | hypothetical protein | - |
| SPHCH_RS04675 () | 1013118..1013546 | - | 429 | WP_013846884.1 | hypothetical protein | - |
| SPHCH_RS04680 () | 1013631..1014101 | - | 471 | WP_013846885.1 | hypothetical protein | - |
| SPHCH_RS20905 () | 1014104..1014640 | - | 537 | WP_013846886.1 | hypothetical protein | - |
| SPHCH_RS04690 () | 1014684..1015274 | - | 591 | WP_013846887.1 | DUF1419 domain-containing protein | - |
| SPHCH_RS04695 () | 1015349..1017049 | - | 1701 | WP_013846888.1 | ATP-binding protein | - |
| SPHCH_RS04700 () | 1017198..1017638 | - | 441 | WP_013846889.1 | hypothetical protein | - |
| SPHCH_RS22430 () | 1017641..1018159 | - | 519 | WP_013846890.1 | hypothetical protein | - |
| SPHCH_RS04710 () | 1018156..1019637 | - | 1482 | WP_013846891.1 | DUF3560 domain-containing protein | - |
| SPHCH_RS04715 () | 1019769..1019963 | - | 195 | WP_013846892.1 | hypothetical protein | - |
| SPHCH_RS22435 () | 1020131..1020892 | - | 762 | WP_013846893.1 | hypothetical protein | - |
| SPHCH_RS04725 () | 1020936..1021397 | - | 462 | WP_013846894.1 | hypothetical protein | - |
| SPHCH_RS04730 () | 1021409..1022056 | - | 648 | WP_013846895.1 | hypothetical protein | - |
| SPHCH_RS04735 () | 1022132..1022827 | - | 696 | WP_013846896.1 | hypothetical protein | - |
| SPHCH_RS04740 () | 1022969..1023778 | - | 810 | WP_013846897.1 | type I restriction-modification system subunit M | - |
| SPHCH_RS04745 () | 1023945..1025192 | - | 1248 | WP_013846898.1 | hypothetical protein | - |
| SPHCH_RS04750 () | 1025380..1025685 | - | 306 | WP_013846899.1 | hypothetical protein | - |
| SPHCH_RS04755 () | 1025682..1026158 | - | 477 | WP_013846900.1 | hypothetical protein | - |
| SPHCH_RS04760 () | 1026385..1026636 | + | 252 | WP_013846901.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| SPHCH_RS04765 () | 1026626..1026922 | + | 297 | WP_013846902.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SPHCH_RS04770 () | 1026972..1032134 | - | 5163 | WP_013846903.1 | lactate dehydrogenase | - |
| SPHCH_RS04775 () | 1032256..1033494 | - | 1239 | WP_013846904.1 | hypothetical protein | - |
| SPHCH_RS04780 () | 1033516..1033995 | - | 480 | WP_013846905.1 | hypothetical protein | - |
| SPHCH_RS04785 () | 1034056..1034340 | - | 285 | WP_013846906.1 | hypothetical protein | - |
| SPHCH_RS04790 () | 1034337..1034612 | - | 276 | WP_013846907.1 | hypothetical protein | - |
| SPHCH_RS04795 () | 1034725..1035483 | - | 759 | WP_013846908.1 | PRTRC system ThiF family protein | - |
| SPHCH_RS04800 () | 1035378..1036132 | - | 755 | Protein_951 | PRTRC system protein A | - |
| SPHCH_RS04805 () | 1036129..1036959 | - | 831 | WP_013846910.1 | PRTRC system protein B | - |
| SPHCH_RS04810 () | 1036968..1037828 | - | 861 | WP_119035277.1 | hypothetical protein | - |
| SPHCH_RS04815 () | 1038135..1038341 | - | 207 | WP_013846912.1 | hypothetical protein | - |
| SPHCH_RS04820 () | 1038391..1038828 | - | 438 | WP_013846913.1 | PRTRC system protein E | - |
| SPHCH_RS04825 () | 1038866..1040503 | - | 1638 | WP_013846914.1 | PRTRC system ParB family protein | - |
| SPHCH_RS04830 () | 1040540..1041526 | - | 987 | WP_013846915.1 | toprim domain-containing protein | - |
| SPHCH_RS20910 () | 1041711..1042202 | - | 492 | WP_143761319.1 | hypothetical protein | - |
| SPHCH_RS21960 () | 1042300..1042539 | + | 240 | WP_062116442.1 | hypothetical protein | - |
| SPHCH_RS04840 () | 1042609..1042947 | + | 339 | WP_013846917.1 | hypothetical protein | - |
| SPHCH_RS04845 () | 1043115..1044518 | - | 1404 | WP_013846918.1 | hypothetical protein ; Integrase | Integrase |
| SPHCH_RS04855 () | 1044949..1045419 | - | 471 | WP_041390309.1 | Lrp/AsnC family transcriptional regulator | - |
| SPHCH_RS04860 () | 1045578..1045826 | + | 249 | WP_041390310.1 | hypothetical protein | - |
| SPHCH_RS22440 () | 1046924..1047499 | + | 576 | WP_174269612.1 | sugar transferase | - |
| SPHCH_RS04870 () | 1047795..1047992 | + | 198 | WP_013846921.1 | hypothetical protein | - |
| SPHCH_RS04875 () | 1048292..1049467 | + | 1176 | WP_041390749.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|