MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 78881 bp
Accession: NC_015564 Location: 4373673..4452553 Organism: Amycolicicoccus subflavus DQS3-9A1 Replicon: chromosome
Accession: NC_015564 Location: 4373673..4452553 Organism: Amycolicicoccus subflavus DQS3-9A1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS9A_RS20300 () | 4369015..4369668 | + | 654 | WP_013809026.1 | PadR family transcriptional regulator | - |
| AS9A_RS20305 () | 4369775..4370767 | + | 993 | WP_013809027.1 | daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein | - |
| AS9A_RS20310 () | 4370764..4371531 | + | 768 | WP_013809028.1 | ABC transporter permease | - |
| AS9A_RS20315 () | 4371598..4373055 | + | 1458 | WP_013809029.1 | amidase | - |
| AS9A_RS20320 () | 4373745..4379204 | + | 5460 | WP_013809030.1 | ATP-grasp domain-containing protein | - |
| AS9A_RS20325 () | 4379299..4379979 | - | 681 | WP_013809031.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| AS9A_RS20330 () | 4379976..4381388 | - | 1413 | WP_049793803.1 | DUF4118 domain-containing protein | - |
| AS9A_RS20335 () | 4381422..4382711 | - | 1290 | WP_083826716.1 | ATPase | - |
| AS9A_RS20340 () | 4382971..4383825 | - | 855 | WP_013809034.1 | ion transporter | - |
| AS9A_RS20345 () | 4383915..4385333 | + | 1419 | WP_013809035.1 | M20/M25/M40 family metallo-hydrolase | - |
| AS9A_RS20350 () | 4385457..4386794 | + | 1338 | WP_013809036.1 | NCS2 family permease | - |
| AS9A_RS20355 () | 4386795..4386986 | - | 192 | WP_013809037.1 | DUF1918 domain-containing protein | - |
| AS9A_RS20360 () | 4387109..4387678 | + | 570 | WP_083826717.1 | lytic transglycosylase domain-containing protein | - |
| AS9A_RS20365 () | 4387852..4388817 | - | 966 | WP_041452302.1 | L-threonine 3-dehydrogenase | VF |
| AS9A_RS20370 () | 4388845..4392009 | - | 3165 | WP_013809040.1 | type 2 lantipeptide synthetase LanM family protein | - |
| AS9A_RS20375 () | 4392084..4392377 | - | 294 | WP_013809041.1 | NHLP leader peptide family RiPP precursor | - |
| AS9A_RS20380 () | 4392457..4392771 | - | 315 | WP_013809042.1 | NHLP leader peptide family RiPP precursor | - |
| AS9A_RS20385 () | 4392814..4395345 | - | 2532 | WP_013809043.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AS9A_RS20390 () | 4395338..4396960 | - | 1623 | WP_158307391.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AS9A_RS20395 () | 4397076..4398711 | + | 1636 | Protein_4080 | peptidoglycan DD-metalloendopeptidase family protein | - |
| AS9A_RS20400 () | 4398768..4399271 | + | 504 | WP_041451256.1 | hypothetical protein | - |
| AS9A_RS20405 () | 4399305..4401035 | + | 1731 | WP_013809047.1 | type IV secretory system conjugative DNA transfer family protein | - |
| AS9A_RS20410 () | 4401032..4401538 | + | 507 | WP_013809048.1 | DUF4913 domain-containing protein | - |
| AS9A_RS20415 () | 4401535..4402227 | + | 693 | WP_013809049.1 | hypothetical protein | - |
| AS9A_RS20420 () | 4402224..4402961 | + | 738 | WP_013809050.1 | hypothetical protein | - |
| AS9A_RS20425 () | 4402991..4406551 | - | 3561 | WP_148262519.1 | conjugative relaxase TrwC/TraI family protein | - |
| AS9A_RS20430 () | 4406788..4407156 | + | 369 | WP_013809052.1 | hypothetical protein | - |
| AS9A_RS20435 () | 4407318..4407704 | + | 387 | WP_148262644.1 | hypothetical protein | - |
| AS9A_RS20440 () | 4407794..4408102 | - | 309 | WP_013809054.1 | hypothetical protein | - |
| AS9A_RS20445 () | 4408118..4408420 | - | 303 | WP_013809055.1 | hypothetical protein | - |
| AS9A_RS20450 () | 4408618..4409415 | + | 798 | WP_041452308.1 | hypothetical protein | - |
| AS9A_RS20455 () | 4409408..4410520 | + | 1113 | WP_013809057.1 | XRE family transcriptional regulator | - |
| AS9A_RS20460 () | 4410588..4413338 | + | 2751 | WP_013809058.1 | AAA family ATPase | - |
| AS9A_RS20465 () | 4413424..4413681 | + | 258 | WP_013809059.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| AS9A_RS20470 () | 4413683..4413940 | + | 258 | WP_013809060.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AS9A_RS23460 () | 4414085..4414195 | + | 111 | Protein_4096 | Lsr2 family protein | - |
| AS9A_RS20475 () | 4414196..4415401 | - | 1206 | WP_013798052.1 | IS30 family transposase ISBlo4 | Transposase |
| AS9A_RS20480 () | 4415367..4415684 | + | 318 | WP_148262520.1 | Lsr2 family protein | - |
| AS9A_RS20485 () | 4416088..4416726 | - | 639 | WP_013809063.1 | TetR/AcrR family transcriptional regulator | - |
| AS9A_RS20490 () | 4417034..4417558 | + | 525 | WP_013809064.1 | PaaI family thioesterase | - |
| AS9A_RS20495 () | 4417711..4418712 | - | 1002 | WP_013809066.1 | hypothetical protein | VF |
| AS9A_RS20500 () | 4418831..4419151 | + | 321 | WP_013809067.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| AS9A_RS20505 () | 4419223..4420563 | + | 1341 | WP_049793806.1 | cytochrome P450 | - |
| AS9A_RS20510 () | 4420560..4421786 | + | 1227 | WP_013809069.1 | FAD-dependent oxidoreductase | - |
| AS9A_RS20515 () | 4422000..4423061 | + | 1062 | WP_013809070.1 | BtrH N-terminal domain-containing protein | - |
| AS9A_RS20520 () | 4423236..4423925 | - | 690 | WP_041451258.1 | TetR/AcrR family transcriptional regulator; helix-turn-helix transcriptional regulator | - |
| AS9A_RS20525 () | 4424044..4425316 | + | 1273 | Protein_4107 | MFS transporter | - |
| AS9A_RS20530 () | 4425360..4426718 | - | 1359 | WP_013809073.1 | IS256 family transposase ISMgi5 | Transposase |
| AS9A_RS20535 () | 4427392..4428197 | + | 806 | Protein_4109 | Potassium-transporting ATPase ATP-binding subunit | VF |
| AS9A_RS22925 () | 4428503..4428970 | - | 468 | WP_013809077.1 | hypothetical protein | - |
| AS9A_RS20545 () | 4429056..4430357 | + | 1302 | WP_083826620.1 | cytochrome P450 | - |
| AS9A_RS20550 () | 4430618..4431223 | + | 606 | WP_202798232.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| AS9A_RS22930 () | 4431861..4432763 | + | 903 | WP_013809080.1 | hypothetical protein | - |
| AS9A_RS20560 () | 4432912..4434675 | + | 1764 | WP_013809081.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| AS9A_RS20565 () | 4434672..4435766 | + | 1095 | WP_013809082.1 | restriction endonuclease | - |
| AS9A_RS20570 () | 4435926..4436633 | + | 708 | WP_013809083.1 | SOS response-associated peptidase | - |
| AS9A_RS20575 () | 4436659..4436979 | - | 321 | WP_148262521.1 | hypothetical protein | VF |
| AS9A_RS20580 () | 4437036..4437791 | - | 756 | WP_158307392.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| AS9A_RS20585 () | 4437953..4440700 | + | 2748 | WP_013809086.1 | helix-turn-helix transcriptional regulator | - |
| AS9A_RS20590 () | 4440818..4441129 | + | 312 | WP_013809087.1 | hypothetical protein | - |
| AS9A_RS20595 () | 4441289..4442581 | + | 1293 | WP_013809089.1 | NDMA-dependent methanol dehydrogenase | - |
| AS9A_RS20600 () | 4442652..4443788 | + | 1137 | WP_013809090.1 | MoxR family ATPase | - |
| AS9A_RS20605 () | 4443796..4445292 | + | 1497 | WP_013809091.1 | VWA domain-containing protein | - |
| AS9A_RS20610 () | 4445292..4446206 | + | 915 | WP_013809092.1 | class I SAM-dependent methyltransferase | - |
| AS9A_RS20615 () | 4446275..4447135 | - | 861 | WP_192808209.1 | Fatty acid oxidation complex subunit alpha | VF |
| AS9A_RS20620 () | 4447250..4448410 | - | 1161 | WP_013809094.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| AS9A_RS20625 () | 4448500..4449180 | - | 681 | WP_041452314.1 | hypothetical protein | VF |
| AS9A_RS20630 () | 4449317..4450801 | - | 1485 | WP_013809096.1 | NCS1 family nucleobase:cation symporter-1 | - |
| AS9A_RS20635 () | 4451016..4452467 | + | 1452 | WP_013809097.1 | YfcC family protein | - |
| AS9A_RS20640 () | 4452399..4454210 | - | 1812 | WP_083826621.1 | AMP-binding protein | - |
| AS9A_RS20645 () | 4454252..4455865 | - | 1614 | WP_049793807.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| AS9A_RS20650 () | 4456044..4457189 | + | 1146 | WP_013809099.1 | acyl-CoA dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|