MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 148204 bp
Accession: NC_015458 Location: 243482..391685 Organism: Pusillimonas sp. T7-7 Replicon: chromosome
Accession: NC_015458 Location: 243482..391685 Organism: Pusillimonas sp. T7-7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT7_RS01040 () | 239226..239876 | + | 651 | WP_013741301.1 | DNA-3-methyladenine glycosylase | - |
| PT7_RS01045 () | 239912..240874 | + | 963 | WP_013741302.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| PT7_RS01050 () | 240912..241940 | + | 1029 | WP_013741303.1 | tRNA lysidine(34) synthetase TilS | - |
| PT7_RS01055 () | 242034..243296 | + | 1263 | WP_013741304.1 | aspartate kinase | - |
| PT7_RS01065 () | 243674..244864 | + | 1191 | WP_013741305.1 | hypothetical protein ; Integrase | Integrase |
| PT7_RS01070 () | 245199..246467 | - | 1269 | WP_013741306.1 | DUF1173 domain-containing protein | - |
| PT7_RS01075 () | 246544..246876 | - | 333 | WP_041682488.1 | hypothetical protein | VF |
| PT7_RS18985 () | 246933..247115 | - | 183 | WP_148255863.1 | hypothetical protein | - |
| PT7_RS01080 () | 247228..247560 | - | 333 | WP_041682489.1 | hypothetical protein | - |
| PT7_RS18390 () | 248285..248725 | - | 441 | WP_049790246.1 | hypothetical protein | - |
| PT7_RS18645 () | 248810..249109 | + | 300 | WP_083812389.1 | helix-turn-helix domain-containing protein | - |
| PT7_RS01090 () | 249133..249897 | + | 765 | WP_013741310.1 | ParA family protein | - |
| PT7_RS01095 () | 249894..250820 | + | 927 | WP_013741311.1 | ParB/RepB/Spo0J family partition protein | - |
| PT7_RS01100 () | 250858..251298 | + | 441 | WP_013741312.1 | hypothetical protein | - |
| PT7_RS01110 () | 251618..252067 | + | 450 | WP_049790247.1 | hypothetical protein | VF |
| PT7_RS01115 () | 252096..252905 | + | 810 | WP_041682491.1 | hypothetical protein | - |
| PT7_RS18395 () | 253088..254086 | + | 999 | WP_013741316.1 | hypothetical protein | VF |
| PT7_RS18650 () | 254228..259018 | + | 4791 | WP_013741317.1 | autotransporter domain-containing protein | - |
| PT7_RS01130 () | 259869..260411 | + | 543 | WP_013741319.1 | DNA repair protein RadC | - |
| PT7_RS01135 () | 260983..261261 | + | 279 | WP_041682492.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PT7_RS01140 () | 261271..261567 | + | 297 | WP_013741321.1 | HigA family addiction module antidote protein | - |
| PT7_RS01145 () | 262043..263290 | + | 1248 | WP_041682493.1 | hypothetical protein | - |
| PT7_RS01150 () | 263598..264020 | + | 423 | WP_013741324.1 | antirestriction protein | - |
| PT7_RS01155 () | 264250..264882 | - | 633 | WP_013741325.1 | hypothetical protein | - |
| PT7_RS01160 () | 265629..265823 | + | 195 | WP_148255974.1 | hypothetical protein | - |
| PT7_RS01165 () | 265845..266228 | + | 384 | WP_013741327.1 | hypothetical protein | - |
| PT7_RS19300 () | 266303..266458 | + | 156 | WP_013741328.1 | hypothetical protein | - |
| PT7_RS01170 () | 266478..268415 | + | 1938 | WP_013741329.1 | ParB/RepB/Spo0J family partition protein | - |
| PT7_RS01175 () | 268474..268776 | + | 303 | WP_013741330.1 | stable inheritance protein KleA | - |
| PT7_RS01180 () | 269116..269559 | + | 444 | WP_049790248.1 | hypothetical protein | - |
| PT7_RS01185 () | 269559..269852 | + | 294 | WP_013741332.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| PT7_RS01190 () | 270091..270348 | + | 258 | WP_013741333.1 | plasmid stability protein stbC | Antitoxin Detail |
| PT7_RS01195 () | 270345..270770 | + | 426 | WP_013741334.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PT7_RS01200 () | 271114..271749 | + | 636 | WP_041682494.1 | DNA methyltransferase | - |
| PT7_RS01205 () | 271753..272007 | + | 255 | WP_013741336.1 | hypothetical protein | - |
| PT7_RS19275 () | 272457..272930 | + | 474 | WP_013741337.1 | hypothetical protein | - |
| PT7_RS18655 () | 272954..273277 | - | 324 | Protein_241 | relaxase domain-containing protein | - |
| PT7_RS01215 () | 273366..274127 | + | 762 | WP_083812486.1 | hypothetical protein | - |
| PT7_RS19180 () | 274599..274754 | - | 156 | WP_158306411.1 | hypothetical protein | - |
| PT7_RS01220 () | 274827..275192 | - | 366 | WP_013741340.1 | hypothetical protein | - |
| PT7_RS01225 () | 275737..277317 | + | 1581 | WP_193383945.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| PT7_RS01230 () | 277360..279324 | + | 1965 | WP_013741343.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PT7_RS01235 () | 279337..279756 | + | 420 | WP_013741344.1 | biopolymer transporter ExbD | - |
| PT7_RS01240 () | 279991..280584 | + | 594 | WP_148255976.1 | TonB family protein | - |
| PT7_RS01245 () | 280699..282405 | + | 1707 | WP_083812487.1 | putative porin | - |
| PT7_RS01250 () | 282778..283347 | + | 570 | WP_193383946.1 | DNA repair protein | - |
| PT7_RS01255 () | 283407..283949 | + | 543 | WP_013741348.1 | YbjN domain-containing protein | - |
| PT7_RS01260 () | 283962..284984 | + | 1023 | WP_013741349.1 | Chaperone SurA | VF |
| PT7_RS18400 () | 284991..285401 | + | 411 | WP_013741350.1 | MbcA/ParS/Xre antitoxin family protein | - |
| PT7_RS01270 () | 285401..285901 | + | 501 | WP_013741351.1 | RES domain-containing protein | - |
| PT7_RS01275 () | 285940..286683 | + | 744 | WP_148255864.1 | serine protease | - |
| PT7_RS01280 () | 286770..287264 | + | 495 | WP_013741353.1 | hypothetical protein | - |
| PT7_RS18405 () | 287389..288096 | + | 708 | WP_013741354.1 | hypothetical protein | VF |
| PT7_RS01290 () | 288093..288611 | + | 519 | WP_013741355.1 | sigma-70 family RNA polymerase sigma factor | - |
| PT7_RS01295 () | 288709..289692 | + | 984 | WP_013741356.1 | FecR domain-containing protein | - |
| PT7_RS01300 () | 289848..302495 | + | 12648 | WP_083812392.1 | filamentous haemagglutinin family protein | - |
| PT7_RS18410 () | 302715..303392 | + | 678 | WP_148255865.1 | STN domain-containing protein | - |
| PT7_RS01310 () | 303389..303922 | + | 534 | WP_013741359.1 | sigma-70 family RNA polymerase sigma factor | - |
| PT7_RS01315 () | 304017..305006 | + | 990 | WP_013741360.1 | DUF4880 domain-containing protein | - |
| PT7_RS01320 () | 305197..318078 | + | 12882 | WP_013741361.1 | hypothetical protein | VF |
| PT7_RS01325 () | 318131..319510 | - | 1380 | WP_148255978.1 | hypothetical protein | VF |
| PT7_RS01330 () | 319599..320048 | - | 450 | WP_013741363.1 | hypothetical protein | - |
| PT7_RS01335 () | 320197..320568 | - | 372 | WP_148255867.1 | hypothetical protein | - |
| PT7_RS01340 () | 320923..322023 | + | 1101 | WP_041682496.1 | hypothetical protein | - |
| PT7_RS01345 () | 322113..322802 | + | 690 | WP_041682497.1 | STN domain-containing protein | - |
| PT7_RS01350 () | 322799..323308 | + | 510 | WP_013741368.1 | sigma-70 family RNA polymerase sigma factor | - |
| PT7_RS01355 () | 323438..324418 | + | 981 | WP_013741369.1 | FecR domain-containing protein | - |
| PT7_RS18415 () | 324611..325273 | + | 663 | WP_013741371.1 | STN domain-containing protein | - |
| PT7_RS01365 () | 325270..325788 | + | 519 | WP_013741372.1 | sigma-70 family RNA polymerase sigma factor | - |
| PT7_RS01370 () | 325891..326871 | + | 981 | WP_013741374.1 | FecR domain-containing protein | - |
| PT7_RS01375 () | 327009..339527 | + | 12519 | WP_013741375.1 | hypothetical protein | VF |
| PT7_RS19280 () | 339683..351679 | + | 11997 | WP_013741376.1 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| PT7_RS19360 () | 351708..352214 | + | 507 | WP_013741377.1 | filamentous haemagglutinin family protein | - |
| PT7_RS18665 () | 352204..352383 | + | 180 | WP_148255868.1 | LysR family transcriptional regulator | - |
| PT7_RS19000 () | 354122..354358 | - | 237 | WP_158306412.1 | hypothetical protein | - |
| PT7_RS01390 () | 354425..354694 | - | 270 | WP_083812398.1 | recombinase family protein | - |
| PT7_RS01395 () | 354736..355895 | + | 1160 | Protein_281 | IS30 family transposase ISHar4 | Transposase |
| PT7_RS01400 () | 355988..356281 | - | 294 | WP_013741383.1 | hypothetical protein | - |
| PT7_RS01405 () | 356281..359178 | - | 2898 | WP_013741384.1 | relaxase domain-containing protein | - |
| PT7_RS01410 () | 359147..360826 | - | 1680 | WP_013741385.1 | type IV secretion system DNA-binding domain-containing protein | - |
| PT7_RS01415 () | 360877..361275 | - | 399 | WP_041682499.1 | hypothetical protein | - |
| PT7_RS01420 () | 361283..361990 | - | 708 | WP_013741387.1 | hypothetical protein | - |
| PT7_RS01425 () | 363098..363565 | - | 468 | WP_041682500.1 | RES family NAD+ phosphorylase | - |
| PT7_RS01430 () | 363565..363939 | - | 375 | WP_193383947.1 | DUF2384 domain-containing protein | - |
| PT7_RS01435 () | 364419..365498 | - | 1080 | WP_148255870.1 | replication initiator protein A | - |
| PT7_RS01440 () | 365656..365913 | - | 258 | WP_013741393.1 | hypothetical protein | - |
| PT7_RS01445 () | 365943..366992 | - | 1050 | WP_013741394.1 | hypothetical protein | VF |
| PT7_RS01450 () | 367223..368422 | - | 1200 | WP_013741395.1 | hypothetical protein | VF |
| PT7_RS01455 () | 368419..369222 | - | 804 | WP_158306413.1 | hypothetical protein | VF |
| PT7_RS01460 () | 369231..369806 | - | 576 | WP_193383942.1 | hypothetical protein | - |
| PT7_RS01465 () | 369814..370071 | - | 258 | WP_013741398.1 | hypothetical protein | - |
| PT7_RS01470 () | 370068..370754 | - | 687 | WP_013741399.1 | hypothetical protein | VF |
| PT7_RS01475 () | 371136..371564 | - | 429 | WP_202796188.1 | type II toxin-antitoxin system VapC family toxin | - |
| PT7_RS01480 () | 371561..371815 | - | 255 | WP_041682502.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PT7_RS01485 () | 372150..372494 | - | 345 | WP_013741402.1 | hypothetical protein | - |
| PT7_RS01490 () | 372481..372804 | - | 324 | WP_013741403.1 | hypothetical protein | - |
| PT7_RS01495 () | 372903..373787 | - | 885 | WP_013741404.1 | type IV secretion system protein | - |
| PT7_RS01500 () | 373827..374177 | - | 351 | WP_148255871.1 | hypothetical protein | - |
| PT7_RS01505 () | 374182..374895 | - | 714 | WP_013741406.1 | hypothetical protein | VF |
| PT7_RS01510 () | 374911..377331 | - | 2421 | WP_041682503.1 | hypothetical protein | VF |
| PT7_RS01515 () | 377338..377718 | - | 381 | WP_049790249.1 | hypothetical protein | VF |
| PT7_RS19185 () | 377715..378026 | - | 312 | WP_013741409.1 | hypothetical protein | VF |
| PT7_RS01525 () | 378166..378852 | - | 687 | WP_013741410.1 | hypothetical protein | VF |
| PT7_RS18680 () | 378865..379494 | - | 630 | WP_041682504.1 | hypothetical protein | - |
| PT7_RS01535 () | 379657..381126 | - | 1470 | WP_013741412.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| PT7_RS01540 () | 381158..382126 | - | 969 | WP_013741413.1 | Flp pilus assembly complex ATPase component TadA | - |
| PT7_RS18425 () | 382126..382626 | - | 501 | WP_049790250.1 | hypothetical protein | VF |
| PT7_RS01550 () | 382634..383746 | - | 1113 | WP_013741415.1 | type II secretion system F family protein | - |
| PT7_RS01555 () | 383743..385485 | - | 1743 | WP_148255875.1 | hypothetical protein | VF |
| PT7_RS01560 () | 385421..385924 | - | 504 | WP_013741417.1 | hypothetical protein | - |
| PT7_RS01565 () | 385914..387260 | - | 1347 | WP_013741418.1 | type 4b pilus protein PilO2 | - |
| PT7_RS01570 () | 387299..387736 | - | 438 | WP_013741419.1 | type IV pilus biogenesis protein PilM | - |
| PT7_RS01575 () | 387739..389466 | - | 1728 | WP_013741420.1 | hypothetical protein | VF |
| PT7_RS01580 () | 389463..390527 | - | 1065 | WP_013741421.1 | TcpQ domain-containing protein | - |
| PT7_RS01590 () | 391785..394073 | - | 2289 | WP_013741423.1 | heavy metal translocating P-type ATPase | - |
| PT7_RS01595 () | 394207..394611 | - | 405 | WP_193383948.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|