MGE detailed information
MGE type: Prophage MGE length: 43267 bp
Accession: NC_015224 Location: 2078778..2122044 Organism: Yersinia enterocolitica subsp. palearctica 105.5R(r) Replicon: chromosome
Accession: NC_015224 Location: 2078778..2122044 Organism: Yersinia enterocolitica subsp. palearctica 105.5R(r) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YE105_RS09330 () | 2074107..2074331 | - | 225 | WP_005160184.1 | DUF2594 family protein | - |
| YE105_RS09335 () | 2075025..2075681 | + | 657 | WP_005160181.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| YE105_RS09340 () | 2075674..2077506 | + | 1833 | WP_005160178.1 | excinuclease ABC subunit UvrC | - |
| YE105_RS09345 () | 2077565..2078113 | + | 549 | WP_005160174.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| YE105_RS09365 () | 2078778..2078993 | - | 216 | WP_013649733.1 | ogr/Delta-like zinc finger family protein | - |
| YE105_RS09370 () | 2079303..2080322 | + | 1020 | WP_032904244.1 | IS110 family transposase ISYen1 | Transposase |
| YE105_RS09375 () | 2080701..2081723 | - | 1023 | Protein_1790 | phage late control D family protein | - |
| YE105_RS09380 () | 2081695..2084326 | - | 2632 | Protein_1791 | phage tail tape measure protein | - |
| YE105_RS09385 () | 2084319..2084438 | - | 120 | WP_004705491.1 | GpE family phage tail protein | - |
| YE105_RS09390 () | 2084453..2084731 | - | 279 | WP_080366163.1 | phage tail assembly protein | - |
| YE105_RS09395 () | 2084877..2085392 | - | 516 | WP_013649736.1 | phage major tail tube protein | - |
| YE105_RS09400 () | 2085404..2086579 | - | 1176 | WP_013649737.1 | phage tail sheath protein | - |
| YE105_RS09405 () | 2086889..2087074 | - | 186 | WP_013649738.1 | hypothetical protein | - |
| YE105_RS22400 () | 2087208..2087346 | - | 139 | Protein_1797 | ash family protein | - |
| YE105_RS09410 () | 2087638..2088522 | - | 885 | WP_072077075.1 | Recombination-promoting nuclease RpnA | VF |
| YE105_RS23140 () | 2088728..2088904 | - | 177 | WP_013649740.1 | hypothetical protein | VF |
| YE105_RS09415 () | 2089346..2089666 | - | 321 | WP_013649741.1 | hypothetical protein | - |
| YE105_RS09420 () | 2089656..2089862 | - | 207 | WP_013649742.1 | hypothetical protein | - |
| YE105_RS23145 () | 2090004..2090171 | + | 168 | WP_005161469.1 | hypothetical protein | - |
| YE105_RS09430 () | 2090243..2090503 | + | 261 | WP_005161466.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| YE105_RS09435 () | 2090510..2090788 | + | 279 | WP_013649743.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| YE105_RS21545 () | 2090841..2091453 | - | 613 | Protein_1805 | tail fiber assembly protein | - |
| YE105_RS09450 () | 2091453..2092745 | - | 1293 | WP_013649744.1 | phage tail protein | - |
| YE105_RS23080 () | 2092718..2092999 | - | 282 | WP_013649745.1 | phage tail protein | - |
| YE105_RS09460 () | 2092992..2093537 | - | 546 | WP_013649746.1 | phage tail protein I | - |
| YE105_RS09465 () | 2093530..2094438 | - | 909 | WP_013649747.1 | baseplate assembly protein | - |
| YE105_RS09470 () | 2094438..2094794 | - | 357 | WP_005161449.1 | GPW/gp25 family protein | - |
| YE105_RS09475 () | 2094791..2095426 | - | 636 | WP_013649748.1 | phage baseplate assembly protein V | - |
| YE105_RS09480 () | 2095563..2095835 | + | 273 | WP_005161438.1 | BrnT family toxin | - |
| YE105_RS09485 () | 2095816..2096106 | + | 291 | WP_005161435.1 | BrnA antitoxin family protein | - |
| YE105_RS09490 () | 2096172..2097233 | + | 1062 | WP_005161434.1 | toll/interleukin-1 receptor domain-containing protein | - |
| YE105_RS09495 () | 2097272..2097718 | - | 447 | WP_005161432.1 | phage virion morphogenesis protein | - |
| YE105_RS09500 () | 2097715..2098182 | - | 468 | WP_013649749.1 | phage tail protein | - |
| YE105_RS09505 () | 2098284..2098709 | - | 426 | WP_013649750.1 | Rz-like lysis system protein LysB | - |
| YE105_RS09510 () | 2098713..2099108 | - | 396 | WP_013649751.1 | M15 family metallopeptidase | - |
| YE105_RS09515 () | 2099095..2099274 | - | 180 | WP_013649752.1 | holin | - |
| YE105_RS21550 () | 2099259..2099570 | - | 312 | WP_071822708.1 | P2 family phage major capsid protein | - |
| YE105_RS22700 () | 2099549..2100212 | - | 664 | Protein_1821 | IS3 family transposase IS1400 | Transposase |
| YE105_RS21555 () | 2100399..2100498 | - | 100 | Protein_1822 | integrase | - |
| YE105_RS09530 () | 2100497..2101222 | - | 726 | Protein_1823 | MFS transporter | - |
| YE105_RS09535 () | 2101256..2102458 | - | 1203 | WP_005176946.1 | IS256 family transposase ISSod4 | Transposase |
| YE105_RS09540 () | 2102514..2103011 | - | 498 | Protein_1825 | MFS transporter | - |
| YE105_RS09545 () | 2103114..2104031 | + | 918 | WP_005161398.1 | LysR family transcriptional regulator | - |
| YE105_RS09550 () | 2104633..2105052 | - | 420 | WP_013649756.1 | helix-turn-helix domain-containing protein | - |
| YE105_RS09555 () | 2105453..2106097 | + | 645 | WP_005161394.1 | Chloramphenicol acetyltransferase | VF |
| YE105_RS09570 () | 2106842..2107261 | + | 420 | WP_013649757.1 | antitermination protein Q | - |
| YE105_RS09575 () | 2107438..2107614 | - | 177 | WP_005161372.1 | GhoT/OrtT family toxin | - |
| YE105_RS09580 () | 2107841..2108017 | + | 177 | WP_005161370.1 | phage holin family protein | - |
| YE105_RS09585 () | 2108019..2108501 | + | 483 | WP_032904719.1 | lysozyme | - |
| YE105_RS09590 () | 2108874..2109758 | + | 885 | WP_005161363.1 | triacylglycerol lipase | - |
| YE105_RS09595 () | 2110060..2110716 | + | 657 | WP_005161358.1 | DUF533 domain-containing protein | - |
| YE105_RS09600 () | 2110823..2111707 | - | 885 | WP_013649759.1 | LysR family transcriptional regulator AmpR | - |
| YE105_RS09605 () | 2111842..2113008 | + | 1167 | WP_013649760.1 | class C beta-lactamase | - |
| YE105_RS09610 () | 2113155..2114246 | - | 1092 | WP_013649761.1 | Ribosome-binding ATPase YchF | VF |
| YE105_RS09615 () | 2114514..2114972 | + | 459 | WP_005161346.1 | hypothetical protein | - |
| YE105_RS09620 () | 2115027..2115620 | - | 594 | WP_013649762.1 | aminoacyl-tRNA hydrolase | - |
| YE105_RS09625 () | 2115952..2116224 | + | 273 | WP_005161340.1 | stress-induced protein YchH | - |
| YE105_RS09635 () | 2116711..2117658 | - | 948 | WP_004390739.1 | ribose-phosphate diphosphokinase | - |
| YE105_RS09640 () | 2117856..2118737 | - | 882 | WP_013649763.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| YE105_RS09645 () | 2118739..2119362 | - | 624 | WP_013649764.1 | lipoprotein insertase outer membrane protein LolB | - |
| YE105_RS09650 () | 2119668..2120930 | + | 1263 | WP_013649765.1 | glutamyl-tRNA reductase | - |
| YE105_RS09655 () | 2120962..2122044 | + | 1083 | WP_005161322.1 | peptide chain release factor 1 | - |
| YE105_RS09660 () | 2122044..2122898 | + | 855 | WP_005161319.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| YE105_RS09665 () | 2122916..2123317 | + | 402 | WP_013649766.1 | SirB2 family protein | - |
| YE105_RS09670 () | 2123314..2124123 | + | 810 | WP_005161315.1 | invasion regulator SirB1 | - |
| YE105_RS09675 () | 2124268..2125122 | + | 855 | WP_005161312.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| YE105_RS09680 () | 2125196..2126896 | - | 1701 | WP_013649767.1 | C4-dicarboxylic acid transporter DauA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|