MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 85110 bp
Accession: NC_014910 Location: 4147817..4232926 Organism: Alicycliphilus denitrificans BC Replicon: chromosome
Accession: NC_014910 Location: 4147817..4232926 Organism: Alicycliphilus denitrificans BC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ALIDE_RS19725 () | 4143230..4143595 | - | 366 | WP_013520740.1 | 50S ribosomal protein L18 | - |
| ALIDE_RS19730 () | 4143607..4144140 | - | 534 | WP_013520741.1 | 50S ribosomal protein L6 | - |
| ALIDE_RS19735 () | 4144165..4144560 | - | 396 | WP_013520742.1 | 30S ribosomal protein S8 | - |
| ALIDE_RS19740 () | 4144582..4144887 | - | 306 | WP_011803856.1 | 30S ribosomal protein S14 | - |
| ALIDE_RS19745 () | 4144897..4145436 | - | 540 | WP_013520743.1 | 50S ribosomal protein L5 | - |
| ALIDE_RS19750 () | 4145446..4145766 | - | 321 | WP_013520744.1 | 50S ribosomal protein L24 | - |
| ALIDE_RS19755 () | 4145777..4146145 | - | 369 | WP_013520745.1 | 50S ribosomal protein L14 | - |
| ALIDE_RS19760 () | 4146353..4147951 | - | 1599 | WP_013520746.1 | glycerol-3-phosphate dehydrogenase/oxidase | - |
| ALIDE_RS19765 () | 4148074..4148835 | + | 762 | WP_013520747.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ALIDE_RS19770 () | 4148858..4150363 | + | 1506 | WP_013520748.1 | glycerol kinase GlpK | - |
| ALIDE_RS19775 () | 4150520..4151359 | + | 840 | WP_013520749.1 | pyrroline-5-carboxylate reductase | - |
| ALIDE_RS19780 () | 4151459..4153243 | + | 1785 | WP_013520750.1 | CotH kinase family protein | - |
| ALIDE_RS19785 () | 4153322..4154194 | - | 873 | WP_013520751.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| ALIDE_RS19790 () | 4154282..4154806 | - | 525 | WP_013520752.1 | DNA starvation/stationary phase protection protein | - |
| ALIDE_RS19795 () | 4154945..4155910 | - | 966 | WP_013520753.1 | LysR family transcriptional regulator | - |
| ALIDE_RS19800 () | 4155956..4158073 | - | 2118 | WP_013520754.1 | ATP-dependent DNA helicase RecG | - |
| ALIDE_RS19805 () | 4158250..4159515 | + | 1266 | WP_013520755.1 | HD-GYP domain-containing protein | - |
| ALIDE_RS19810 () | 4159604..4160707 | + | 1104 | WP_013520756.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| ALIDE_RS19815 () | 4160855..4161736 | + | 882 | WP_013520757.1 | DMT family transporter | - |
| ALIDE_RS19820 () | 4161795..4163402 | - | 1608 | WP_013520758.1 | gamma-glutamyltransferase family protein | - |
| ALIDE_RS19825 () | 4163408..4164370 | - | 963 | WP_013520759.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| ALIDE_RS19830 () | 4164497..4165402 | + | 906 | WP_013520760.1 | LysR family transcriptional regulator | - |
| ALIDE_RS19835 () | 4165411..4166127 | - | 717 | WP_013520761.1 | uracil-DNA glycosylase | - |
| ALIDE_RS19840 () | 4166188..4166988 | - | 801 | WP_013520762.1 | indole-3-glycerol phosphate synthase TrpC | - |
| ALIDE_RS24635 () | 4166995..4167147 | - | 153 | WP_013520763.1 | hypothetical protein | - |
| ALIDE_RS19845 () | 4167144..4168175 | - | 1032 | WP_013520764.1 | anthranilate phosphoribosyltransferase | - |
| ALIDE_RS19850 () | 4168175..4168744 | - | 570 | WP_013520765.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| ALIDE_RS19855 () | 4169867..4170613 | + | 747 | WP_003050429.1 | hypothetical protein | - |
| ALIDE_RS19860 () | 4170733..4170945 | + | 213 | WP_003050427.1 | AlpA family transcriptional regulator | - |
| ALIDE_RS19865 () | 4170988..4171863 | + | 876 | WP_003050424.1 | Sporulation initiation inhibitor protein Soj | VF |
| ALIDE_RS19870 () | 4171847..4172116 | + | 270 | WP_013520766.1 | hypothetical protein | - |
| ALIDE_RS19875 () | 4172109..4173782 | + | 1674 | WP_013520767.1 | ParB family protein | - |
| ALIDE_RS19880 () | 4173797..4174357 | + | 561 | WP_003050401.1 | DUF2857 domain-containing protein | - |
| ALIDE_RS19885 () | 4174361..4175593 | + | 1233 | WP_003050398.1 | hypothetical protein | - |
| ALIDE_RS19890 () | 4176013..4176807 | + | 795 | WP_003050396.1 | TIGR03761 family integrating conjugative element protein | - |
| ALIDE_RS19895 () | 4176804..4177331 | + | 528 | WP_003050393.1 | DUF3158 family protein | - |
| ALIDE_RS19900 () | 4177405..4177857 | + | 453 | WP_003050391.1 | single-stranded DNA-binding protein | - |
| ALIDE_RS19905 () | 4178134..4179243 | + | 1110 | Protein_3990 | DNA topoisomerase III | - |
| ALIDE_RS19910 () | 4179316..4180119 | - | 804 | WP_013516261.1 | IS21 family transposase ISAlde2 | Transposase |
| ALIDE_RS19915 () | 4180109..4181635 | - | 1527 | WP_013516260.1 | IS21 family transposase ISAlde2 | Transposase |
| ALIDE_RS19920 () | 4181744..4182091 | + | 348 | Protein_3993 | hypothetical protein | - |
| ALIDE_RS19925 () | 4182156..4183265 | + | 1110 | WP_013520770.1 | O-methyltransferase | - |
| ALIDE_RS19930 () | 4183315..4183635 | + | 321 | WP_003050315.1 | hypothetical protein | - |
| ALIDE_RS19935 () | 4183725..4184030 | + | 306 | WP_013520771.1 | hypothetical protein | - |
| ALIDE_RS19940 () | 4184163..4186442 | + | 2280 | WP_013520772.1 | DEAD/DEAH box helicase | - |
| ALIDE_RS19945 () | 4186580..4187179 | + | 600 | WP_013520773.1 | hypothetical protein | VF |
| ALIDE_RS19950 () | 4187176..4187820 | + | 645 | WP_013520774.1 | hypothetical protein | - |
| ALIDE_RS19955 () | 4187835..4188560 | + | 726 | WP_013520775.1 | TIGR03759 family integrating conjugative element protein | - |
| ALIDE_RS19960 () | 4188542..4189144 | + | 603 | WP_013520776.1 | hypothetical protein | VF |
| ALIDE_RS19965 () | 4189141..4189689 | + | 549 | WP_013520777.1 | integrating conjugative element protein | - |
| ALIDE_RS19970 () | 4189694..4191886 | + | 2193 | WP_013520778.1 | type IV conjugative transfer system coupling protein TraD | - |
| ALIDE_RS19975 () | 4191883..4192644 | + | 762 | WP_013520779.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| ALIDE_RS19980 () | 4192743..4193126 | + | 384 | WP_013520780.1 | RAQPRD family integrative conjugative element protein | - |
| ALIDE_RS19985 () | 4193123..4193356 | + | 234 | WP_013520781.1 | TIGR03758 family integrating conjugative element protein | - |
| ALIDE_RS19990 () | 4193373..4193732 | + | 360 | WP_013520782.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| ALIDE_RS19995 () | 4193744..4194154 | + | 411 | WP_013520783.1 | TIGR03750 family conjugal transfer protein | - |
| ALIDE_RS20000 () | 4194151..4194843 | + | 693 | WP_013520784.1 | TIGR03746 family integrating conjugative element protein | - |
| ALIDE_RS20005 () | 4194840..4195754 | + | 915 | WP_013520785.1 | TIGR03749 family integrating conjugative element protein | - |
| ALIDE_RS20010 () | 4195744..4197162 | + | 1419 | WP_013520786.1 | TIGR03752 family integrating conjugative element protein | - |
| ALIDE_RS20015 () | 4197143..4197592 | + | 450 | WP_003050109.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| ALIDE_RS20020 () | 4197592..4200474 | + | 2883 | WP_003050106.1 | conjugative transfer ATPase | - |
| ALIDE_RS20025 () | 4200499..4201263 | + | 765 | WP_003050104.1 | DsbA family protein | - |
| ALIDE_RS20030 () | 4201440..4201934 | + | 495 | WP_003050103.1 | DNA repair protein RadC | - |
| ALIDE_RS20035 () | 4202098..4202544 | + | 447 | WP_013520787.1 | TIGR03757 family integrating conjugative element protein | - |
| ALIDE_RS20040 () | 4202541..4203488 | + | 948 | WP_003050097.1 | TIGR03756 family integrating conjugative element protein | - |
| ALIDE_RS20045 () | 4203499..4204893 | + | 1395 | WP_003050095.1 | integrating conjugative element protein | - |
| ALIDE_RS20050 () | 4204890..4205237 | + | 348 | WP_003050094.1 | hypothetical protein | - |
| ALIDE_RS20055 () | 4205253..4206776 | + | 1524 | WP_003050092.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| ALIDE_RS20060 () | 4206783..4207142 | - | 360 | WP_013520788.1 | DUF3742 family protein | - |
| ALIDE_RS20065 () | 4207227..4207859 | - | 633 | WP_003050087.1 | RES family NAD+ phosphorylase | - |
| ALIDE_RS20070 () | 4207872..4208498 | - | 627 | WP_003050085.1 | hypothetical protein | - |
| ALIDE_RS20075 () | 4208814..4210676 | + | 1863 | WP_003050081.1 | TraI domain-containing protein | - |
| ALIDE_RS20080 () | 4210727..4211209 | - | 483 | WP_013520789.1 | AAA family ATPase | - |
| ALIDE_RS20085 () | 4211257..4211526 | - | 270 | WP_003050070.1 | hypothetical protein | - |
| ALIDE_RS23910 () | 4211553..4211690 | - | 138 | Protein_4027 | IS66 family transposase ISPsy43 | Transposase |
| ALIDE_RS20090 () | 4211785..4213725 | - | 1941 | WP_013520790.1 | alpha/beta fold hydrolase | - |
| ALIDE_RS20095 () | 4213722..4214756 | - | 1035 | WP_013520791.1 | DUF4105 domain-containing protein | - |
| ALIDE_RS23635 () | 4214765..4214923 | - | 159 | Protein_4030 | TetR family transcriptional regulator | - |
| ALIDE_RS20100 () | 4215033..4216559 | + | 1527 | WP_013516260.1 | IS21 family transposase ISAlde2 | Transposase |
| ALIDE_RS20105 () | 4216549..4217352 | + | 804 | WP_013516261.1 | IS21 family transposase ISAlde2 | Transposase |
| ALIDE_RS24640 () | 4217362..4217520 | - | 159 | WP_193352856.1 | transposase | - |
| ALIDE_RS23645 () | 4217734..4218048 | + | 315 | WP_081462206.1 | hypothetical protein | - |
| ALIDE_RS20115 () | 4218240..4219187 | - | 948 | WP_013520793.1 | hypothetical protein | - |
| ALIDE_RS20120 () | 4219175..4219723 | - | 549 | WP_013520794.1 | RES family NAD+ phosphorylase | Toxin Detail |
| ALIDE_RS20125 () | 4219720..4220091 | - | 372 | WP_013520795.1 | MbcA/ParS/Xre antitoxin family protein | Antitoxin Detail |
| ALIDE_RS20130 () | 4220406..4220735 | - | 330 | WP_013520796.1 | chorismate mutase | - |
| ALIDE_RS20135 () | 4220732..4222231 | - | 1500 | WP_013520797.1 | Anthranilate synthase component 1 | VF |
| ALIDE_RS20140 () | 4222574..4224334 | + | 1761 | WP_013520798.1 | Methyl-accepting chemotaxis protein I | VF |
| ALIDE_RS20145 () | 4224497..4227262 | + | 2766 | WP_013520799.1 | putative signaling protein | VF |
| ALIDE_RS20150 () | 4227201..4227953 | - | 753 | WP_041716198.1 | phosphoglycolate phosphatase | - |
| ALIDE_RS20155 () | 4228142..4228516 | + | 375 | WP_013520801.1 | hypothetical protein | - |
| ALIDE_RS20160 () | 4228535..4229215 | - | 681 | WP_013520802.1 | Ribulose-phosphate 3-epimerase | VF |
| ALIDE_RS20165 () | 4229264..4229671 | + | 408 | WP_013520803.1 | Co2+/Mg2+ efflux protein ApaG | - |
| ALIDE_RS20170 () | 4229668..4231656 | + | 1989 | WP_013520804.1 | site-specific recombinase | - |
| ALIDE_RS20175 () | 4231826..4233091 | + | 1266 | WP_013520805.1 | cation:proton antiporter | - |
| ALIDE_RS20180 () | 4233081..4234205 | + | 1125 | WP_013520806.1 | glutamate--cysteine ligase | - |
| ALIDE_RS20185 () | 4234208..4235191 | + | 984 | WP_013520807.1 | thiamine-phosphate kinase | - |
| ALIDE_RS20190 () | 4235179..4235868 | - | 690 | WP_013520808.1 | TetR/AcrR family transcriptional regulator | - |
| ALIDE_RS20195 () | 4236027..4237769 | + | 1743 | WP_013520809.1 | alpha/beta fold hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|