MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 119718 bp
Accession: NC_014908 Location: 1..119718 Organism: Alicycliphilus denitrificans BC Replicon: plasmid pALIDE01
Accession: NC_014908 Location: 1..119718 Organism: Alicycliphilus denitrificans BC Replicon: plasmid pALIDE01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ALIDE_RS21995 () | 187..1257 | - | 1071 | WP_013516226.1 | ParB/RepB/Spo0J family partition protein | - |
| ALIDE_RS22000 () | 1265..1969 | - | 705 | WP_013516227.1 | ParA family protein | - |
| ALIDE_RS23675 () | 3068..3346 | + | 279 | WP_013516228.1 | hypothetical protein | - |
| ALIDE_RS22005 () | 4303..4593 | + | 291 | WP_013516230.1 | H-NS histone family protein | - |
| ALIDE_RS22010 () | 4606..4926 | + | 321 | WP_013516231.1 | H-NS histone family protein | - |
| ALIDE_RS22015 () | 5025..5441 | + | 417 | WP_013516232.1 | hypothetical protein | - |
| ALIDE_RS22020 () | 5438..7261 | + | 1824 | WP_013516233.1 | conjugative transfer system coupling protein TraD | - |
| ALIDE_RS22025 () | 7271..7879 | + | 609 | WP_013516234.1 | DUF4400 domain-containing protein | - |
| ALIDE_RS22030 () | 7843..8619 | + | 777 | WP_013516235.1 | EAL domain protein | - |
| ALIDE_RS22035 () | 8616..9077 | - | 462 | WP_013516236.1 | hypothetical protein | - |
| ALIDE_RS23685 () | 9315..9821 | + | 507 | WP_013516237.1 | lytic transglycosylase domain-containing protein | - |
| ALIDE_RS24290 () | 9825..13577 | + | 3753 | WP_148238028.1 | hypothetical protein | - |
| ALIDE_RS24295 () | 13692..14285 | + | 594 | WP_148238029.1 | hypothetical protein | - |
| ALIDE_RS22050 () | 14282..14560 | + | 279 | WP_013516240.1 | type IV conjugative transfer system protein TraL | - |
| ALIDE_RS22055 () | 14557..15333 | + | 777 | WP_013516241.1 | hypothetical protein | - |
| ALIDE_RS22060 () | 15342..16475 | + | 1134 | WP_013516242.1 | type-F conjugative transfer system secretin TraK | - |
| ALIDE_RS22065 () | 16526..17902 | + | 1377 | WP_148238048.1 | TraB/VirB10 family protein | - |
| ALIDE_RS23690 () | 17908..18417 | + | 510 | WP_158306341.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ALIDE_RS22075 () | 18453..18788 | + | 336 | WP_013516245.1 | hypothetical protein | - |
| ALIDE_RS22080 () | 18799..21243 | + | 2445 | WP_013516246.1 | type IV secretion system protein TraC | - |
| ALIDE_RS22085 () | 21251..21745 | + | 495 | WP_013516247.1 | hypothetical protein | - |
| ALIDE_RS22090 () | 21967..22407 | + | 441 | WP_148238049.1 | signal peptidase I | - |
| ALIDE_RS22095 () | 22370..23554 | + | 1185 | WP_148238030.1 | conjugal transfer protein TrbC | - |
| ALIDE_RS22100 () | 23554..24708 | + | 1155 | WP_013516250.1 | TraU family protein | - |
| ALIDE_RS23695 () | 24771..28715 | + | 3945 | WP_148238050.1 | conjugal transfer protein TraN | - |
| ALIDE_RS22110 () | 29218..30111 | + | 894 | WP_158306342.1 | hypothetical protein | - |
| ALIDE_RS22115 () | 30099..31079 | + | 981 | WP_013516253.1 | conjugal transfer protein TraF | - |
| ALIDE_RS23700 () | 31082..32590 | + | 1509 | WP_013516254.1 | conjugal transfer protein TraH | - |
| ALIDE_RS24495 () | 32599..38373 | + | 5775 | WP_013516255.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| ALIDE_RS23710 () | 38484..39299 | + | 816 | WP_013516256.1 | sel1 repeat family protein | - |
| ALIDE_RS23715 () | 39372..40256 | + | 885 | WP_013516257.1 | fibronectin type III domain-containing protein | - |
| ALIDE_RS22135 () | 40306..41127 | - | 822 | WP_013516258.1 | IS21-like element helper ATPase IstB | - |
| ALIDE_RS22140 () | 41124..42635 | - | 1512 | WP_013516259.1 | IS21 family transposase | - |
| ALIDE_RS22145 () | 42752..43462 | + | 711 | WP_049787131.1 | DNA cytosine methyltransferase | - |
| ALIDE_RS22150 () | 43639..45165 | + | 1527 | WP_013516260.1 | IS21 family transposase | - |
| ALIDE_RS22155 () | 45155..45958 | + | 804 | WP_013516261.1 | IS21-like element ISThsp10 family helper ATPase IstB | - |
| ALIDE_RS22160 () | 46273..47208 | + | 936 | WP_013516262.1 | hypothetical protein | - |
| ALIDE_RS22170 () | 47767..48147 | + | 381 | WP_013516265.1 | hypothetical protein | - |
| ALIDE_RS22175 () | 48419..49102 | + | 684 | WP_013516266.1 | hypothetical protein | - |
| ALIDE_RS23720 () | 49184..50155 | + | 972 | WP_013516267.1 | hypothetical protein | - |
| ALIDE_RS22190 () | 50331..51050 | + | 720 | WP_013516268.1 | hypothetical protein | - |
| ALIDE_RS22195 () | 51131..51385 | + | 255 | WP_013516269.1 | hypothetical protein | - |
| ALIDE_RS22200 () | 51382..51564 | + | 183 | WP_013516270.1 | hypothetical protein | - |
| ALIDE_RS22205 () | 51781..52095 | + | 315 | WP_013516271.1 | hypothetical protein | - |
| ALIDE_RS22210 () | 52105..52425 | + | 321 | WP_013516272.1 | hypothetical protein | - |
| ALIDE_RS22215 () | 52504..52965 | + | 462 | WP_013516273.1 | hypothetical protein | - |
| ALIDE_RS22220 () | 53214..53597 | + | 384 | WP_013516274.1 | hypothetical protein | - |
| ALIDE_RS23725 () | 53594..53842 | + | 249 | WP_013516275.1 | hypothetical protein | - |
| ALIDE_RS23730 () | 53915..54676 | + | 762 | WP_013516276.1 | hypothetical protein | - |
| ALIDE_RS23735 () | 54843..55154 | + | 312 | WP_013516277.1 | hypothetical protein | - |
| ALIDE_RS22230 () | 55151..55882 | + | 732 | WP_013516278.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ALIDE_RS23740 () | 55886..56215 | + | 330 | WP_013516279.1 | hypothetical protein | - |
| ALIDE_RS22235 () | 56208..56780 | + | 573 | WP_013516280.1 | hypothetical protein | - |
| ALIDE_RS22240 () | 56800..57459 | + | 660 | WP_013516281.1 | site-specific integrase | - |
| ALIDE_RS22245 () | 57456..57671 | + | 216 | WP_148238033.1 | helix-turn-helix domain-containing protein | - |
| ALIDE_RS24500 () | 57783..57953 | + | 171 | WP_158306343.1 | hypothetical protein | - |
| ALIDE_RS24315 () | 58297..58575 | + | 279 | WP_148238034.1 | hypothetical protein | - |
| ALIDE_RS22255 () | 58591..58983 | + | 393 | WP_013516284.1 | hypothetical protein | - |
| ALIDE_RS22260 () | 58998..59384 | + | 387 | WP_013516285.1 | hypothetical protein | - |
| ALIDE_RS24320 () | 59395..59661 | + | 267 | WP_148238035.1 | hypothetical protein | - |
| ALIDE_RS23745 () | 59673..59894 | + | 222 | WP_013516286.1 | hypothetical protein | - |
| ALIDE_RS22265 () | 59911..60132 | + | 222 | WP_013516287.1 | hypothetical protein | - |
| ALIDE_RS24325 () | 60142..60399 | + | 258 | WP_148238036.1 | hypothetical protein | - |
| ALIDE_RS22270 () | 60423..61022 | + | 600 | WP_013516288.1 | hypothetical protein | - |
| ALIDE_RS22275 () | 61061..61258 | + | 198 | WP_041716384.1 | hypothetical protein | - |
| ALIDE_RS22280 () | 61314..61682 | + | 369 | WP_013516290.1 | hypothetical protein | - |
| ALIDE_RS23750 () | 61700..61897 | + | 198 | WP_013516291.1 | hypothetical protein | - |
| ALIDE_RS22285 () | 62125..62394 | + | 270 | WP_148238037.1 | hypothetical protein | - |
| ALIDE_RS23755 () | 62409..62705 | + | 297 | WP_013516293.1 | hypothetical protein | - |
| ALIDE_RS24330 () | 62715..62978 | + | 264 | WP_148238038.1 | hypothetical protein | - |
| ALIDE_RS24505 () | 63071..63235 | + | 165 | WP_013516294.1 | hypothetical protein | - |
| ALIDE_RS22295 () | 63248..63625 | + | 378 | WP_013516295.1 | hypothetical protein | - |
| ALIDE_RS22300 () | 63637..63891 | + | 255 | WP_013516296.1 | hypothetical protein | - |
| ALIDE_RS24335 () | 63905..64270 | + | 366 | WP_148238039.1 | hypothetical protein | - |
| ALIDE_RS22305 () | 64281..64520 | + | 240 | WP_013516297.1 | hypothetical protein | - |
| ALIDE_RS22310 () | 64537..64806 | + | 270 | WP_148238040.1 | hypothetical protein | - |
| ALIDE_RS23760 () | 64822..65058 | + | 237 | WP_013516298.1 | DUF3331 domain-containing protein | - |
| ALIDE_RS24510 () | 65154..65318 | + | 165 | WP_013516294.1 | hypothetical protein | - |
| ALIDE_RS22315 () | 66153..67667 | - | 1515 | WP_013516299.1 | IS66 family transposase | - |
| ALIDE_RS22320 () | 67750..68082 | - | 333 | WP_013516300.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| ALIDE_RS22325 () | 68079..68507 | - | 429 | WP_013516301.1 | IS66 family insertion sequence hypothetical protein | - |
| ALIDE_RS23765 () | 68540..69163 | + | 624 | WP_148238041.1 | phospholipase D family protein | - |
| ALIDE_RS23770 () | 69216..69581 | + | 366 | WP_013516303.1 | hypothetical protein | - |
| ALIDE_RS22330 () | 69620..70567 | + | 948 | WP_013516304.1 | S49 family peptidase | - |
| ALIDE_RS22335 () | 70657..70860 | + | 204 | WP_158306344.1 | hypothetical protein | - |
| ALIDE_RS22340 () | 70956..71171 | - | 216 | WP_013516306.1 | hypothetical protein | - |
| ALIDE_RS23775 () | 71289..71621 | - | 333 | WP_013516307.1 | hypothetical protein | - |
| ALIDE_RS22350 () | 71767..72951 | - | 1185 | Protein_87 | Tn3-like element IS1071 family transposase | - |
| ALIDE_RS22355 () | 72984..76013 | - | 3030 | WP_012077404.1 | Tn3 family transposase | - |
| ALIDE_RS22360 () | 76010..76602 | - | 593 | Protein_89 | recombinase family protein | - |
| ALIDE_RS22365 () | 76841..77119 | + | 279 | WP_011342941.1 | hypothetical protein | - |
| ALIDE_RS22370 () | 77116..77400 | + | 285 | WP_011342942.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| ALIDE_RS22375 () | 77807..78367 | + | 561 | WP_011514928.1 | chlorite dismutase family protein | - |
| ALIDE_RS23780 () | 78501..78857 | + | 357 | WP_012435589.1 | cupin domain-containing protein | - |
| ALIDE_RS22380 () | 79354..80313 | + | 960 | WP_013516309.1 | HPP family protein | - |
| ALIDE_RS24515 () | 80412..80564 | + | 153 | WP_158306345.1 | hypothetical protein | - |
| ALIDE_RS22385 () | 80638..81177 | - | 540 | WP_013516310.1 | molybdopterin-guanine dinucleotide biosynthesis protein B | - |
| ALIDE_RS23785 () | 81247..81564 | - | 318 | WP_013516311.1 | c-type cytochrome | - |
| ALIDE_RS22395 () | 81691..82410 | - | 720 | WP_013516312.1 | hypothetical protein | - |
| ALIDE_RS22400 () | 82407..82988 | - | 582 | WP_013516313.1 | molecular chaperone TorD family protein | - |
| ALIDE_RS22405 () | 82985..83971 | - | 987 | WP_013516314.1 | respiratory nitrate reductase subunit beta | - |
| ALIDE_RS22410 () | 83982..86726 | - | 2745 | WP_013516315.1 | molybdopterin-dependent oxidoreductase | - |
| ALIDE_RS22415 () | 87131..87904 | + | 774 | WP_148238051.1 | chlorite dismutase family protein | - |
| ALIDE_RS22420 () | 88041..88328 | + | 288 | WP_013516317.1 | pentapeptide MXKDX repeat protein | - |
| ALIDE_RS23790 () | 88334..88576 | + | 243 | Protein_104 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| ALIDE_RS23795 () | 88688..89044 | + | 357 | WP_081462207.1 | cupin domain-containing protein | - |
| ALIDE_RS22425 () | 89415..90386 | + | 972 | WP_013516319.1 | tyrosine-type recombinase/integrase | - |
| ALIDE_RS22430 () | 90406..91161 | - | 756 | WP_013516320.1 | IS21-like element ISIde2 family helper ATPase IstB | - |
| ALIDE_RS22435 () | 91181..92719 | - | 1539 | WP_013516321.1 | IS21-like element ISIde2 family transposase | - |
| ALIDE_RS22440 () | 93068..93919 | - | 852 | Protein_109 | DUF4158 domain-containing protein | - |
| ALIDE_RS22445 () | 94428..94760 | + | 333 | WP_148238043.1 | hypothetical protein | - |
| ALIDE_RS22450 () | 94890..96803 | - | 1914 | WP_013516323.1 | tyrosine-type recombinase/integrase | - |
| ALIDE_RS24345 () | 96879..97109 | - | 231 | WP_148238044.1 | hypothetical protein | - |
| ALIDE_RS22455 () | 97121..97396 | - | 276 | WP_049787134.1 | hypothetical protein | - |
| ALIDE_RS22460 () | 97530..100262 | - | 2733 | WP_148238052.1 | DEAD/DEAH box helicase family protein | - |
| ALIDE_RS22465 () | 100286..102214 | - | 1929 | WP_013516326.1 | site-specific DNA-methyltransferase | - |
| ALIDE_RS22470 () | 102214..102537 | - | 324 | WP_013516327.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ALIDE_RS23800 () | 102534..102755 | - | 222 | WP_013516328.1 | antitoxin MazE family protein | Antitoxin Detail |
| ALIDE_RS22475 () | 102831..103667 | + | 837 | WP_013516329.1 | restriction endonuclease | - |
| ALIDE_RS22480 () | 103685..104056 | - | 372 | WP_013516330.1 | HU family DNA-binding protein | - |
| ALIDE_RS22485 () | 104214..104666 | + | 453 | WP_013516331.1 | helix-turn-helix domain-containing protein | - |
| ALIDE_RS22490 () | 104677..105234 | - | 558 | WP_013516332.1 | hypothetical protein | - |
| ALIDE_RS22495 () | 105502..107238 | + | 1737 | Protein_122 | Tn3-like element IS1071 family transposase | - |
| ALIDE_RS23805 () | 107675..108031 | - | 357 | WP_012435589.1 | cupin domain-containing protein | - |
| ALIDE_RS23810 () | 108165..108726 | - | 562 | Protein_124 | chlorite dismutase family protein | - |
| ALIDE_RS22500 () | 109133..109417 | - | 285 | WP_011342942.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| ALIDE_RS22505 () | 109414..109692 | - | 279 | WP_011342941.1 | hypothetical protein | - |
| ALIDE_RS22510 () | 109931..110524 | + | 594 | WP_012435588.1 | recombinase family protein | - |
| ALIDE_RS22515 () | 110521..113551 | + | 3031 | Protein_128 | Tn3 family transposase | - |
| ALIDE_RS23815 () | 113600..114016 | + | 417 | WP_081462208.1 | site-specific integrase | - |
| ALIDE_RS22525 () | 114257..114895 | - | 639 | Protein_130 | DUF4158 domain-containing protein | - |
| ALIDE_RS22530 () | 116314..116775 | + | 462 | WP_148238046.1 | hypothetical protein | - |
| ALIDE_RS22535 () | 117039..117539 | + | 501 | WP_013516338.1 | hypothetical protein | - |
| ALIDE_RS22540 () | 117756..119066 | - | 1311 | WP_148238047.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|