MGE detailed information
MGE type: Prophage MGE length: 15400 bp
Accession: NC_014837 Location: 1578339..1593738 Organism: Pantoea sp. At-9b Replicon: chromosome
Accession: NC_014837 Location: 1578339..1593738 Organism: Pantoea sp. At-9b Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAT9B_RS07130 () | 1573377..1573988 | + | 612 | WP_041525755.1 | autoinducer synthase | - |
| PAT9B_RS07135 () | 1574022..1574246 | - | 225 | WP_013508585.1 | DUF2594 family protein | - |
| PAT9B_RS07140 () | 1574675..1575334 | + | 660 | WP_013508586.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PAT9B_RS07145 () | 1575327..1577159 | + | 1833 | WP_013508587.1 | excinuclease ABC subunit UvrC | - |
| PAT9B_RS07150 () | 1577228..1577776 | + | 549 | WP_013508588.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PAT9B_RS07170 () | 1578339..1578650 | - | 312 | Protein_1387 | hypothetical protein ; Integrase | Integrase |
| PAT9B_RS07175 () | 1578670..1578970 | + | 301 | Protein_1388 | hypothetical protein | - |
| PAT9B_RS07180 () | 1579035..1579223 | + | 189 | WP_013508589.1 | hypothetical protein | - |
| PAT9B_RS07185 () | 1579269..1579927 | + | 659 | Protein_1390 | DNA-binding protein | - |
| PAT9B_RS07190 () | 1580217..1580666 | + | 450 | WP_013508590.1 | hypothetical protein | - |
| PAT9B_RS07195 () | 1580712..1582379 | + | 1668 | WP_190274644.1 | M48 family metalloprotease | - |
| PAT9B_RS07200 () | 1582951..1583430 | + | 480 | WP_013508592.1 | hypothetical protein | - |
| PAT9B_RS07205 () | 1583563..1583883 | + | 321 | WP_013508593.1 | hypothetical protein | - |
| PAT9B_RS07215 () | 1584532..1584883 | + | 352 | Protein_1395 | HNH endonuclease | - |
| PAT9B_RS07220 () | 1585044..1585517 | + | 474 | WP_013508594.1 | phage terminase small subunit P27 family | - |
| PAT9B_RS07225 () | 1585521..1586336 | + | 816 | Protein_1397 | terminase large subunit | - |
| PAT9B_RS07230 () | 1586864..1587268 | - | 405 | WP_013508596.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PAT9B_RS29625 () | 1587373..1587549 | - | 177 | WP_013508597.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PAT9B_RS07235 () | 1588155..1588421 | + | 267 | WP_013508598.1 | hypothetical protein | - |
| PAT9B_RS07240 () | 1588528..1588713 | - | 186 | WP_013508599.1 | hypothetical protein | - |
| PAT9B_RS07245 () | 1588988..1590307 | - | 1320 | WP_013508600.1 | TolC family protein | - |
| PAT9B_RS07250 () | 1590312..1591544 | - | 1233 | WP_013508601.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PAT9B_RS07255 () | 1591537..1593738 | - | 2202 | WP_013508602.1 | type I secretion system permease/ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|