MGE detailed information
MGE type: Genomic_island MGE length: 21952 bp
Accession: NC_014830 Location: 3861137..3883088 Organism: Intrasporangium calvum DSM 43043 Replicon: chromosome
Accession: NC_014830 Location: 3861137..3883088 Organism: Intrasporangium calvum DSM 43043 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INTCA_RS17560 () | 3856681..3857736 | + | 1056 | WP_013494272.1 | patatin-like phospholipase family protein | - |
| INTCA_RS17565 () | 3857861..3858670 | - | 810 | WP_013494273.1 | LLM class flavin-dependent oxidoreductase | - |
| INTCA_RS17570 () | 3858684..3859127 | - | 444 | WP_013494274.1 | VOC family protein | - |
| INTCA_RS17575 () | 3859227..3859766 | + | 540 | WP_013494275.1 | ASCH domain-containing protein | - |
| INTCA_RS19285 () | 3859795..3860208 | + | 414 | WP_148236901.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| INTCA_RS17580 () | 3860273..3860638 | - | 366 | WP_013494276.1 | hypothetical protein | - |
| INTCA_RS17585 () | 3861137..3861994 | - | 858 | WP_013494278.1 | hypothetical protein | VF |
| INTCA_RS17590 () | 3862062..3862511 | - | 450 | WP_013494279.1 | VOC family protein | - |
| INTCA_RS19690 () | 3862958..3863460 | - | 503 | Protein_3474 | GNAT family N-acetyltransferase | - |
| INTCA_RS17595 () | 3863664..3863990 | - | 327 | WP_169312935.1 | cupin domain-containing protein | - |
| INTCA_RS19295 () | 3864428..3865346 | + | 919 | Protein_3476 | IS5 family transposase ISMt1 | Transposase |
| INTCA_RS17610 () | 3865420..3867051 | - | 1632 | WP_013494282.1 | hypothetical protein | - |
| INTCA_RS17615 () | 3867301..3868443 | + | 1143 | WP_013494283.1 | zinc-binding dehydrogenase | - |
| INTCA_RS17620 () | 3868720..3869058 | - | 339 | WP_013494284.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| INTCA_RS17625 () | 3869042..3869239 | - | 198 | WP_013494285.1 | hypothetical protein | - |
| INTCA_RS17630 () | 3869431..3869919 | + | 489 | WP_148236665.1 | hypothetical protein | - |
| INTCA_RS17635 () | 3870250..3871545 | + | 1296 | WP_013494287.1 | IS110 family transposase IS1547 | Transposase |
| INTCA_RS18825 () | 3871615..3872079 | - | 465 | WP_052338053.1 | cupin domain-containing protein | - |
| INTCA_RS19300 () | 3872217..3872495 | - | 279 | WP_013494289.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| INTCA_RS17645 () | 3872492..3872758 | - | 267 | WP_013494290.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| INTCA_RS17650 () | 3872929..3873615 | - | 687 | WP_148236667.1 | IS91 family transposase ISAzo26 | Transposase |
| INTCA_RS17655 () | 3873670..3875007 | - | 1338 | Protein_3487 | hypothetical protein ; Integrase | Integrase |
| INTCA_RS17670 () | 3876794..3877117 | - | 324 | WP_013491643.1 | helix-turn-helix transcriptional regulator | - |
| INTCA_RS17675 () | 3877122..3878222 | - | 1101 | WP_013491644.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| INTCA_RS17680 () | 3878312..3878635 | - | 324 | WP_041307934.1 | hypothetical protein | - |
| INTCA_RS19305 () | 3878840..3879244 | + | 405 | WP_013494293.1 | NUDIX domain-containing protein | - |
| INTCA_RS17690 () | 3879346..3880056 | - | 711 | WP_148236669.1 | DUF429 domain-containing protein | - |
| INTCA_RS17695 () | 3880423..3880647 | - | 225 | WP_013494295.1 | hypothetical protein | - |
| INTCA_RS17700 () | 3880823..3881446 | + | 624 | WP_013494296.1 | GNAT family N-acetyltransferase | - |
| INTCA_RS19940 () | 3881606..3881779 | - | 174 | WP_169312936.1 | hypothetical protein | - |
| INTCA_RS17705 () | 3882069..3883088 | + | 1020 | WP_013494298.1 | hypothetical protein | - |
| INTCA_RS17710 () | 3883253..3883789 | - | 537 | WP_013494299.1 | GNAT family N-acetyltransferase | - |
| INTCA_RS17715 () | 3883909..3885171 | - | 1263 | WP_013491425.1 | ISL3 family transposase | - |
| INTCA_RS17720 () | 3885303..3885545 | - | 243 | WP_013494300.1 | hypothetical protein | - |
| INTCA_RS17725 () | 3885542..3885790 | - | 249 | WP_041307937.1 | ribbon-helix-helix protein, CopG family | - |
| INTCA_RS17730 () | 3885998..3886631 | + | 634 | Protein_3502 | HAD hydrolase-like protein | - |
| INTCA_RS17735 () | 3886807..3887430 | - | 624 | WP_041309029.1 | isopentenyl-diphosphate Delta-isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|