MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 211864 bp
Accession: NC_014811        Location: 1..211864         Organism: Mycobacterium gilvum Spyr1       Replicon: plasmid pMSPYR101


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MSPYR1_RS28575 () 286..1494 - 1209 WP_006247693.1 hypothetical protein -
MSPYR1_RS26240 () 2520..2846 - 327 WP_006247692.1 helix-turn-helix transcriptional regulator -
MSPYR1_RS26245 () 2843..3868 - 1026 WP_168440091.1 tyrosine-type recombinase/integrase -
MSPYR1_RS26250 () 4555..5277 + 723 WP_006246608.1 helix-turn-helix domain-containing protein -
MSPYR1_RS26255 () 5271..5975 + 705 WP_006246607.1 RES domain-containing protein -
MSPYR1_RS26260 () 6192..6788 - 597 WP_006246606.1 hypothetical protein -
MSPYR1_RS26265 () 6785..7756 - 972 WP_006246605.1 Sporulation initiation inhibitor protein Soj VF
MSPYR1_RS26270 () 9219..9815 - 597 WP_006246603.1 hypothetical protein -
MSPYR1_RS26280 () 10332..12287 - 1956 WP_006246601.1 hypothetical protein -
MSPYR1_RS27445 () 13014..13838 + 825 WP_099962966.1 hypothetical protein -
MSPYR1_RS28580 () 13868..14050 + 183 WP_048469548.1 hypothetical protein -
MSPYR1_RS26295 () 15619..16284 - 666 WP_006246598.1 hypothetical protein -
MSPYR1_RS26300 () 16306..16602 - 297 WP_006246597.1 WhiB family transcriptional regulator -
MSPYR1_RS26305 () 16770..17546 + 777 WP_013470138.1 helix-turn-helix domain-containing protein -
MSPYR1_RS28040 () 17606..17923 + 318 WP_006246595.1 thermonuclease family protein -
MSPYR1_RS26310 () 18039..18668 - 630 WP_006246594.1 class I SAM-dependent methyltransferase -
MSPYR1_RS26315 () 18695..19306 - 612 WP_006246593.1 isoprenylcysteine carboxylmethyltransferase family protein -
MSPYR1_RS26320 () 19386..20048 - 663 WP_006246592.1 thioredoxin -
MSPYR1_RS26325 () 20049..20693 - 645 WP_006246591.1 class I SAM-dependent methyltransferase -
MSPYR1_RS26330 () 20690..21394 - 705 WP_006246590.1 YHS domain-containing protein -
MSPYR1_RS26335 () 21369..22007 - 639 WP_006246589.1 isoprenylcysteine carboxylmethyltransferase family protein -
MSPYR1_RS26340 () 22124..22495 + 372 WP_013470139.1 metalloregulator ArsR/SmtB family transcription factor -
MSPYR1_RS26345 () 22492..24471 + 1980 WP_006246587.1 cadmium-translocating P-type ATPase -
MSPYR1_RS26350 () 24778..25245 - 468 WP_006246586.1 low molecular weight phosphatase family protein -
MSPYR1_RS26355 () 25276..25944 - 669 WP_013470140.1 arsenate reductase ArsC -
MSPYR1_RS26360 () 25941..27059 - 1119 WP_003887764.1 ACR3 family arsenite efflux transporter -
MSPYR1_RS26365 () 27056..27430 - 375 WP_003887763.1 metalloregulator ArsR/SmtB family transcription factor -
MSPYR1_RS26370 () 27474..27986 - 513 WP_013470141.1 DinB family protein -
MSPYR1_RS26375 () 28044..28520 - 477 WP_013470142.1 VOC family protein -
MSPYR1_RS26380 () 28622..28981 + 360 WP_003887760.1 metalloregulator ArsR/SmtB family transcription factor -
MSPYR1_RS26385 () 29013..30992 - 1980 WP_099962892.1 tyrosine-type recombinase/integrase -
MSPYR1_RS26390 () 31391..32614 - 1224 WP_013470144.1 tyrosine-type recombinase/integrase -
MSPYR1_RS26395 () 32957..34087 + 1131 WP_013470145.1 lytic transglycosylase -
MSPYR1_RS26400 () 34508..35911 + 1404 WP_013470146.1 IS1380 family transposase ISMav8 Transposase
MSPYR1_RS26405 () 36996..37274 - 279 WP_011767909.1 response regulator -
MSPYR1_RS26410 () 37635..39044 - 1410 WP_013470148.1 Peptidoglycan endopeptidase RipA VF
MSPYR1_RS26415 () 39425..39790 + 366 WP_011767911.1 BlaI/MecI/CopY family transcriptional regulator -
MSPYR1_RS26420 () 39787..40707 + 921 WP_011767912.1 M56 family metallopeptidase -
MSPYR1_RS28060 () 41137..41829 + 693 WP_011767913.1 response regulator transcription factor -
MSPYR1_RS26430 () 41893..42666 - 774 WP_011767914.1 Peptidoglycan endopeptidase RipB VF
MSPYR1_RS26435 () 43189..44412 - 1224 WP_011767915.1 L,D-transpeptidase family protein -
MSPYR1_RS26440 () 44751..45722 - 972 WP_011767916.1 sterol desaturase family protein -
MSPYR1_RS26445 () 45880..46737 - 858 WP_011767917.1 hypothetical protein -
MSPYR1_RS26450 () 47339..47800 + 462 WP_011767919.1 DUF2384 domain-containing protein -
MSPYR1_RS26455 () 47874..48662 + 789 WP_011767920.1 hypothetical protein -
MSPYR1_RS28800 () 48669..49058 - 390 WP_173362772.1 Sensor histidine kinase ResE VF
MSPYR1_RS26465 () 49721..49933 - 213 Protein_46 IS3 family transposase ISMsm7 Transposase
MSPYR1_RS26470 () 49986..50285 - 300 WP_013470151.1 hypothetical protein -
MSPYR1_RS26475 () 50282..52195 - 1914 WP_013470152.1 tyrosine-type recombinase/integrase -
MSPYR1_RS26480 () 52356..53903 + 1548 WP_011892097.1 IS1182 family transposase ISMgi3 Transposase
MSPYR1_RS26485 () 54061..55017 - 957 Protein_50 Tyrosine recombinase XerD VF
MSPYR1_RS26490 () 55101..55493 - 393 WP_173362769.1 IS3 family transposase ISMsm7 Transposase
MSPYR1_RS26495 () 55730..55888 - 159 Protein_52 IS21 family transposase ISMt2 Transposase
MSPYR1_RS26500 () 56028..57095 + 1068 WP_011777792.1 site-specific integrase -
MSPYR1_RS26505 () 57092..57406 + 315 WP_011777793.1 helix-turn-helix transcriptional regulator -
MSPYR1_RS26510 () 57431..59074 + 1644 WP_013470153.1 site-specific integrase -
MSPYR1_RS28805 () 59136..59459 - 324 Protein_56 IS21 family transposase ISAzo12 Transposase
MSPYR1_RS26515 () 59551..60732 + 1182 WP_013470154.1 tyrosine-type recombinase/integrase -
MSPYR1_RS26520 () 60729..62904 + 2176 Protein_58 tyrosine-type recombinase/integrase -
MSPYR1_RS26525 () 62901..63344 + 444 WP_013470155.1 transposase -
MSPYR1_RS26530 () 63390..63740 - 351 Protein_60 IS21 family transposase ISMt2 Transposase
MSPYR1_RS26535 () 63737..65365 - 1629 WP_013470157.1 IS21 family transposase ISMt2 Transposase
MSPYR1_RS28600 () 65807..65926 - 120 Protein_62 IS3 family transposase ISAar24 Transposase
MSPYR1_RS26545 () 66501..67316 - 816 WP_011767780.1 hypothetical protein VF
MSPYR1_RS26550 () 67313..68773 - 1461 WP_013470158.1 IS481 family transposase ISGur11 Transposase
MSPYR1_RS26555 () 68864..69484 - 621 WP_011767782.1 helix-turn-helix domain-containing protein -
MSPYR1_RS26565 () 70085..70639 + 555 Protein_66 ATP-binding protein -
MSPYR1_RS26570 () 71331..72350 - 1020 WP_013470159.1 L,D-transpeptidase -
MSPYR1_RS26575 () 72575..73792 - 1218 Protein_68 YHS domain-containing protein -
MSPYR1_RS26580 () 73773..74621 - 849 WP_013470161.1 glycoside hydrolase -
MSPYR1_RS26585 () 74707..75927 - 1221 WP_013470162.1 L,D-transpeptidase family protein -
MSPYR1_RS26590 () 76596..77801 + 1206 WP_013470163.1 hypothetical protein -
MSPYR1_RS26595 () 78399..79115 + 717 WP_013470164.1 Peptidoglycan endopeptidase RipB VF
MSPYR1_RS26600 () 79527..80543 + 1017 WP_013470165.1 putative endopeptidase VF
MSPYR1_RS26605 () 80552..81346 - 795 WP_013470166.1 alpha/beta hydrolase -
MSPYR1_RS26610 () 81703..82368 + 666 WP_013470167.1 DUF305 domain-containing protein -
MSPYR1_RS26615 () 82585..83544 + 960 WP_013470168.1 amidohydrolase family protein -
MSPYR1_RS26620 () 83583..84740 - 1158 WP_013470169.1 Signal transduction histidine-protein kinase BaeS VF
MSPYR1_RS26625 () 84740..85495 - 756 WP_013470170.1 Sensory transduction protein regX3 VF
MSPYR1_RS26630 () 85838..87352 + 1515 WP_041789258.1 multicopper oxidase family protein -
MSPYR1_RS26635 () 87442..88863 - 1422 WP_013470172.1 Peptidoglycan endopeptidase RipA VF
MSPYR1_RS26640 () 89464..89958 + 495 WP_013470174.1 hypothetical protein -
MSPYR1_RS26645 () 89961..90584 + 624 WP_013470175.1 TlpA family protein disulfide reductase -
MSPYR1_RS26650 () 90581..91006 + 426 WP_013470176.1 BlaI/MecI/CopY family transcriptional regulator -
MSPYR1_RS26655 () 91015..91905 + 891 WP_013470177.1 M56 family metallopeptidase -
MSPYR1_RS28090 () 91987..92301 + 315 Protein_85 hypothetical protein -
MSPYR1_RS28605 () 92430..92582 + 153 WP_013470179.1 hypothetical protein -
MSPYR1_RS26665 () 93285..94067 + 783 WP_081460777.1 L,D-transpeptidase -
MSPYR1_RS26670 () 94226..94615 + 390 WP_013470182.1 BlaI/MecI/CopY family transcriptional regulator -
MSPYR1_RS26675 () 94612..95556 + 945 WP_013470183.1 M56 family metallopeptidase -
MSPYR1_RS26680 () 95684..96661 - 978 WP_173362773.1 Diacylglycerol acyltransferase/mycolyltransferase Ag85B VF
MSPYR1_RS26685 () 96938..97942 + 1005 WP_013470186.1 M23 family metallopeptidase -
MSPYR1_RS28610 () 98142..98402 + 261 Protein_92 hypothetical protein -
MSPYR1_RS26695 () 98365..100098 - 1734 WP_173362770.1 apolipoprotein N-acyltransferase -
MSPYR1_RS26700 () 100561..101295 + 735 WP_013470190.1 Transcriptional regulatory protein WalR VF
MSPYR1_RS26705 () 101374..101835 - 462 WP_013470191.1 transglycosylase family protein -
MSPYR1_RS26710 () 102192..102629 + 438 WP_013470192.1 cupin domain-containing protein -
MSPYR1_RS26715 () 102726..103187 - 462 WP_013470193.1 DUF2752 domain-containing protein -
MSPYR1_RS26720 () 103467..104342 + 876 WP_013470194.1 Peptidoglycan-N-acetylglucosamine deacetylase VF
MSPYR1_RS26725 () 104933..105379 + 447 WP_013470195.1 hypothetical protein -
MSPYR1_RS26730 () 105500..106609 + 1110 WP_013470196.1 PLP-dependent cysteine synthase family protein -
MSPYR1_RS26735 () 106609..107868 + 1260 WP_013470197.1 MFS transporter -
MSPYR1_RS26740 () 108294..108593 + 300 WP_013470198.1 hypothetical protein -
MSPYR1_RS26745 () 109126..109581 + 456 WP_013470199.1 rhodanese-like domain-containing protein -
MSPYR1_RS28100 () 109671..109874 - 204 WP_060937726.1 hypothetical protein -
MSPYR1_RS26750 () 110285..110692 + 408 WP_013470200.1 four-helix bundle copper-binding protein -
MSPYR1_RS26755 () 110707..110976 - 270 WP_173362771.1 metal-sensitive transcriptional regulator -
MSPYR1_RS26760 () 111385..112788 - 1404 WP_013470146.1 IS1380 family transposase ISMav8 Transposase
MSPYR1_RS26765 () 112917..113627 + 711 Protein_108 putative copper-transporting ATPase PacS VF
MSPYR1_RS26770 () 114238..114678 + 441 Protein_109 Copper-exporting P-type ATPase VF
MSPYR1_RS26775 () 114730..115545 + 816 WP_013470202.1 DUF305 domain-containing protein -
MSPYR1_RS26780 () 116257..116520 + 264 WP_041789276.1 SHOCT domain-containing protein -
MSPYR1_RS26785 () 116986..117825 + 840 WP_013470204.1 sulfurtransferase -
MSPYR1_RS26790 () 118051..118683 + 633 WP_013470205.1 phosphatase PAP2 family protein -
MSPYR1_RS26795 () 118768..121182 + 2415 WP_013470206.1 hypothetical protein VF
MSPYR1_RS28105 () 121599..123054 + 1456 Protein_115 MFS transporter -
MSPYR1_RS26815 () 123071..125545 + 2475 WP_013470210.1 heavy metal translocating P-type ATPase -
MSPYR1_RS26820 () 125649..128063 + 2415 WP_013470211.1 phosphoketolase family protein -
MSPYR1_RS26825 () 128149..128643 + 495 WP_013470212.1 hypothetical protein -
MSPYR1_RS26830 () 128759..130057 + 1299 WP_013470213.1 cyclopropane-fatty-acyl-phospholipid synthase family protein -
MSPYR1_RS26835 () 130203..131537 + 1335 Protein_120 amino acid permease -
MSPYR1_RS26840 () 131751..132154 - 404 Protein_121 VOC family protein -
MSPYR1_RS26845 () 132956..133423 + 468 WP_013470216.1 heme-binding protein -
MSPYR1_RS26850 () 133496..133696 + 201 WP_041789281.1 IS1182 family transposase ISMgi2 Transposase
MSPYR1_RS26855 () 133808..135886 + 2079 WP_109788875.1 NUDIX domain-containing protein -
MSPYR1_RS26860 () 136011..137339 - 1329 Protein_125 AarF/ABC1/UbiB kinase family protein -
MSPYR1_RS26865 () 137473..138876 - 1404 WP_013470146.1 IS1380 family transposase ISMav8 Transposase
MSPYR1_RS26870 () 138995..139312 - 318 Protein_127 AarF/ABC1/UbiB kinase family protein -
MSPYR1_RS26875 () 139316..139978 - 663 Protein_128 family 65 glycosyl hydrolase -
MSPYR1_RS26880 () 140014..140640 + 627 WP_085978092.1 hypothetical protein -
MSPYR1_RS28615 () 140980..141333 + 354 WP_162097012.1 hypothetical protein -
MSPYR1_RS26885 () 141255..141563 + 309 WP_162097013.1 acyl-CoA dehydrogenase family protein -
MSPYR1_RS26890 () 141784..142005 + 222 WP_041789318.1 SHOCT domain-containing protein -
MSPYR1_RS26895 () 142002..143483 + 1482 WP_013470219.1 multicopper oxidase family protein -
MSPYR1_RS26900 () 143824..144315 + 492 WP_158022684.1 hemophore-related protein -
MSPYR1_RS26905 () 144586..145767 + 1182 WP_158022688.1 hypothetical protein -
MSPYR1_RS28110 () 145835..146492 + 658 Protein_136 class I SAM-dependent methyltransferase -
MSPYR1_RS26915 () 146785..147363 - 579 WP_013470223.1 helix-turn-helix domain-containing protein -
MSPYR1_RS28115 () 148005..148478 + 474 WP_013470224.1 sulfurtransferase -
MSPYR1_RS28620 () 149336..149497 + 162 WP_158022685.1 hypothetical protein -
MSPYR1_RS26920 () 150255..151424 + 1170 Protein_140 type IV secretory system conjugative DNA transfer family protein -
MSPYR1_RS28125 () 151420..151734 - 315 Protein_141 DUF1942 domain-containing protein -
MSPYR1_RS26925 () 151830..154670 - 2841 WP_013470225.1 Multifunctional conjugation protein TraI Relaxase
MSPYR1_RS26940 () 156683..157069 - 387 WP_013470226.1 hypothetical protein -
MSPYR1_RS26945 () 157315..158520 + 1206 Protein_145 IS110 family transposase ISMysp1 Transposase
MSPYR1_RS26950 () 158655..158942 - 288 WP_013470227.1 hypothetical protein -
MSPYR1_RS26955 () 159340..160290 - 951 WP_013470228.1 DUF4192 domain-containing protein -
MSPYR1_RS26960 () 160672..161133 - 462 WP_013470229.1 hypothetical protein -
MSPYR1_RS26965 () 161159..161452 - 294 WP_006247759.1 hypothetical protein -
MSPYR1_RS28130 () 161835..162147 - 313 Protein_150 hypothetical protein -
MSPYR1_RS26970 () 162555..163097 - 543 WP_011767735.1 hypothetical protein -
MSPYR1_RS26975 () 163345..164550 + 1206 Protein_152 IS110 family transposase ISMysp1 Transposase
MSPYR1_RS26980 () 164641..165006 - 366 WP_011767736.1 hypothetical protein -
MSPYR1_RS26985 () 165396..165647 - 252 WP_013470231.1 hypothetical protein -
MSPYR1_RS26990 () 166036..166392 - 357 WP_006247669.1 helix-turn-helix domain-containing protein -
MSPYR1_RS26995 () 166389..166778 - 390 WP_006247670.1 hypothetical protein -
MSPYR1_RS27000 () 166941..167216 - 276 WP_011767738.1 hypothetical protein -
MSPYR1_RS27005 () 167463..168668 + 1206 Protein_158 IS110 family transposase ISMysp1 Transposase
MSPYR1_RS27010 () 168746..169204 - 459 WP_011767739.1 hypothetical protein -
MSPYR1_RS27015 () 169585..170244 - 660 WP_013470232.1 hypothetical protein -
MSPYR1_RS27020 () 170632..171117 - 486 WP_013470233.1 hypothetical protein -
MSPYR1_RS27025 () 171197..171772 - 576 WP_013470234.1 hypothetical protein -
MSPYR1_RS27030 () 172148..172435 - 288 WP_006247564.1 hypothetical protein -
MSPYR1_RS27035 () 172513..173052 - 540 WP_013470235.1 hypothetical protein -
MSPYR1_RS27040 () 173595..174270 - 676 Protein_165 hypothetical protein -
MSPYR1_RS27045 () 174350..174541 - 192 WP_006247565.1 hypothetical protein -
MSPYR1_RS27050 () 174541..175161 - 621 WP_013470237.1 hypothetical protein -
MSPYR1_RS28625 () 175158..175796 - 639 WP_013470238.1 hypothetical protein -
MSPYR1_RS27060 () 175826..176071 - 246 WP_006247568.1 glutaredoxin-like protein NrdH -
MSPYR1_RS27065 () 176670..178310 - 1641 WP_013470239.1 ParB N-terminal domain-containing protein -
MSPYR1_RS27070 () 178754..179788 - 1035 WP_013470240.1 DUF945 domain-containing protein -
MSPYR1_RS28810 () 180128..180295 + 168 WP_013470241.1 hypothetical protein -
MSPYR1_RS27075 () 180318..181529 - 1212 WP_013470242.1 hypothetical protein -
MSPYR1_RS27080 () 181891..182346 + 456 WP_013470243.1 hypothetical protein -
MSPYR1_RS28135 () 182362..183318 + 957 WP_013470244.1 hypothetical protein -
MSPYR1_RS27090 () 183514..185463 + 1950 WP_013470245.1 hypothetical protein -
MSPYR1_RS27095 () 185636..186622 + 987 WP_013470246.1 non-homologous end-joining DNA ligase -
MSPYR1_RS27100 () 186623..188182 - 1560 WP_013470247.1 Serine/threonine-protein kinase PknJ VF
MSPYR1_RS27105 () 188229..188639 - 411 WP_041789295.1 ribonuclease Toxin Detail
MSPYR1_RS27110 () 188630..188857 - 228 WP_013470249.1 hypothetical protein Antitoxin Detail
MSPYR1_RS27115 () 189003..189959 + 957 WP_013470250.1 DUF4226 domain-containing protein -
MSPYR1_RS28140 () 189991..190416 - 426 WP_081460779.1 hypothetical protein -
MSPYR1_RS27125 () 190343..190717 + 375 WP_158022686.1 hypothetical protein -
MSPYR1_RS27130 () 190796..191500 - 705 WP_013470253.1 hypothetical protein -
MSPYR1_RS27135 () 191957..193156 + 1200 WP_013470254.1 helix-turn-helix transcriptional regulator -
MSPYR1_RS27140 () 193162..194091 + 930 WP_013470255.1 hypothetical protein -
MSPYR1_RS27145 () 194199..194507 + 309 WP_013470256.1 hypothetical protein -
MSPYR1_RS27150 () 195025..195537 - 513 WP_006247297.1 hypothetical protein -
MSPYR1_RS27155 () 195626..196210 + 585 WP_006247296.1 MPT63 family protein -
MSPYR1_RS27160 () 196393..196770 + 378 WP_006247295.1 BlaI/MecI/CopY family transcriptional regulator -
MSPYR1_RS27165 () 196767..197723 + 957 WP_006247294.1 M56 family metallopeptidase -
MSPYR1_RS27170 () 197857..198543 - 687 WP_006247293.1 YHS domain-containing protein -
MSPYR1_RS27175 () 198619..199245 - 627 WP_013470258.1 class I SAM-dependent methyltransferase -
MSPYR1_RS27180 () 199411..200556 - 1146 WP_006247291.1 NAD(P)/FAD-dependent oxidoreductase -
MSPYR1_RS27185 () 201165..201434 + 270 WP_006247290.1 metal-sensitive transcriptional regulator -
MSPYR1_RS27190 () 201536..202309 + 774 WP_027332155.1 sulfite exporter TauE/SafE family protein -
MSPYR1_RS27195 () 202412..203785 + 1374 WP_006247288.1 MBL fold metallo-hydrolase -
MSPYR1_RS27200 () 203977..204390 + 414 WP_027332154.1 metalloregulator ArsR/SmtB family transcription factor -
MSPYR1_RS27205 () 204387..206354 + 1968 WP_006247286.1 cadmium-translocating P-type ATPase -
MSPYR1_RS27210 () 206351..206857 + 507 WP_006247285.1 Lipoprotein signal peptidase VF
MSPYR1_RS27215 () 206854..207456 + 603 WP_006247284.1 cadmium resistance transporter -
MSPYR1_RS27220 () 207517..208110 + 594 WP_006247283.1 TlpA family protein disulfide reductase -
MSPYR1_RS27225 () 208181..208498 - 318 WP_006247282.1 MerR family transcriptional regulator -
MSPYR1_RS27230 () 208620..209576 + 957 WP_158022687.1 alpha/beta fold hydrolase -
MSPYR1_RS27235 () 209687..210355 - 669 WP_006247280.1 peroxiredoxin -
MSPYR1_RS27240 () 210934..211701 + 768 WP_006247278.1 cytochrome c biogenesis CcdA family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance