MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66057 bp
Accession: NC_014555 Location: 1496741..1562797 Organism: Helicobacter pylori PeCan4 Replicon: chromosome
Accession: NC_014555 Location: 1496741..1562797 Organism: Helicobacter pylori PeCan4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPPC_RS07205 () | 1491764..1493635 | - | 1872 | WP_001158374.1 | ATP-dependent DNA helicase RecG | - |
| HPPC_RS07210 () | 1493717..1494064 | + | 348 | WP_000837055.1 | hypothetical protein | - |
| HPPC_RS07215 () | 1494068..1494703 | + | 636 | WP_000765633.1 | outer membrane protein | - |
| HPPC_RS07220 () | 1494700..1495452 | - | 753 | WP_000767491.1 | exodeoxyribonuclease III | - |
| HPPC_RS07230 () | 1495630..1497072 | - | 1443 | WP_000751640.1 | hypothetical protein | - |
| HPPC_RS07240 () | 1497301..1498668 | - | 1368 | WP_000380575.1 | IS21 family transposase IS643 | Transposase |
| HPPC_RS07245 () | 1498820..1499356 | + | 537 | WP_000922944.1 | purine-nucleoside phosphorylase | - |
| HPPC_RS07250 () | 1499403..1499642 | + | 240 | WP_000461849.1 | DUF2443 family protein | - |
| HPPC_RS07255 () | 1499643..1501436 | + | 1794 | WP_000334363.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| HPPC_RS07260 () | 1501460..1502086 | + | 627 | WP_000451936.1 | FAD-dependent thymidylate synthase | - |
| HPPC_RS07265 () | 1502416..1503615 | - | 1200 | WP_000937091.1 | restriction endonuclease subunit S | - |
| HPPC_RS07270 () | 1503603..1504379 | - | 777 | WP_000418238.1 | hypothetical protein | - |
| HPPC_RS07275 () | 1504467..1506929 | - | 2463 | WP_000985409.1 | type I restriction-modification system subunit M | - |
| HPPC_RS07280 () | 1506999..1509974 | + | 2976 | WP_000846152.1 | type I restriction endonuclease subunit R | - |
| HPPC_RS07285 () | 1509974..1510681 | + | 708 | WP_000995276.1 | M48 family metallopeptidase | - |
| HPPC_RS07290 () | 1510771..1513296 | - | 2526 | WP_000549194.1 | TonB-dependent receptor family protein | - |
| HPPC_RS07295 () | 1513816..1514784 | - | 969 | WP_000604426.1 | arginase | - |
| HPPC_RS07300 () | 1514797..1516224 | - | 1428 | WP_000654568.1 | amino acid permease | - |
| HPPC_RS07305 () | 1516418..1517560 | + | 1143 | WP_000152063.1 | alanine dehydrogenase | - |
| HPPC_RS07310 () | 1517683..1519364 | + | 1682 | Protein_1406 | DUF262 domain-containing protein | - |
| HPPC_RS07315 () | 1519375..1520103 | - | 729 | WP_000713173.1 | hypothetical protein | VF |
| HPPC_RS07320 () | 1520287..1521141 | + | 855 | WP_013356254.1 | NAD(+)/NADH kinase | - |
| HPPC_RS07325 () | 1521154..1522728 | + | 1575 | WP_001204505.1 | DNA repair protein RecN | - |
| HPPC_RS07330 () | 1522725..1524032 | + | 1308 | WP_000667867.1 | DUF814 domain-containing protein | - |
| HPPC_RS07335 () | 1524051..1524347 | + | 297 | WP_000539103.1 | hypothetical protein | - |
| HPPC_RS07340 () | 1524651..1524938 | + | 288 | WP_000692616.1 | hypothetical protein | - |
| HPPC_RS08435 () | 1525044..1525184 | + | 141 | WP_013356255.1 | hypothetical protein | - |
| HPPC_RS07345 () | 1525210..1526073 | - | 864 | WP_013356256.1 | 3'-5' exonuclease | - |
| HPPC_RS07350 () | 1526051..1526704 | - | 654 | WP_000861445.1 | Ribulose-phosphate 3-epimerase | VF |
| HPPC_RS07355 () | 1526775..1527647 | + | 873 | WP_000384761.1 | class 1 fructose-bisphosphatase | - |
| HPPC_RS07360 () | 1527647..1527850 | + | 204 | WP_012443457.1 | hypothetical protein | - |
| HPPC_RS07365 () | 1527863..1528759 | + | 897 | WP_000254491.1 | hypothetical protein | - |
| HPPC_RS07370 () | 1528752..1529483 | + | 732 | WP_000891115.1 | hypothetical protein | - |
| HPPC_RS08325 () | 1529698..1530024 | - | 327 | WP_000465883.1 | hypothetical protein | - |
| HPPC_RS07380 () | 1530930..1532985 | + | 2056 | Protein_1421 | relaxase/mobilization nuclease domain-containing protein | - |
| HPPC_RS07385 () | 1534128..1535195 | + | 1068 | WP_000933806.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| HPPC_RS07390 () | 1535579..1536286 | - | 708 | WP_001106879.1 | Fic family protein | - |
| HPPC_RS07395 () | 1536409..1536837 | - | 429 | Protein_1424 | CAAX protease | - |
| HPPC_RS07400 () | 1537141..1537920 | + | 780 | WP_001209224.1 | hypothetical protein | - |
| HPPC_RS07405 () | 1537940..1538233 | + | 294 | WP_001160307.1 | hypothetical protein | - |
| HPPC_RS07410 () | 1538240..1539766 | + | 1527 | WP_000323321.1 | hypothetical protein | - |
| HPPC_RS07415 () | 1539763..1540065 | + | 303 | WP_001964151.1 | hypothetical protein | - |
| HPPC_RS07420 () | 1540066..1540332 | + | 267 | WP_001173701.1 | hypothetical protein | - |
| HPPC_RS07425 () | 1540325..1542748 | + | 2424 | WP_041199537.1 | Type IV secretion system protein PtlC | VF |
| HPPC_RS07430 () | 1542751..1544784 | + | 2034 | WP_000655390.1 | type IA DNA topoisomerase | - |
| HPPC_RS07435 () | 1544901..1546070 | + | 1170 | WP_000044722.1 | hypothetical protein | VF |
| HPPC_RS07440 () | 1546070..1547587 | + | 1518 | WP_000714765.1 | hypothetical protein | VF |
| HPPC_RS07445 () | 1547587..1548852 | + | 1266 | WP_000505567.1 | Type IV secretion system protein virB10 | VF |
| HPPC_RS07450 () | 1548922..1549215 | + | 294 | WP_000395561.1 | hypothetical protein | - |
| HPPC_RS07455 () | 1549208..1549471 | + | 264 | WP_000564638.1 | hypothetical protein | - |
| HPPC_RS07460 () | 1549468..1549767 | + | 300 | WP_000660147.1 | hypothetical protein | - |
| HPPC_RS07465 () | 1549767..1550708 | + | 942 | WP_000625143.1 | Type IV secretion system protein VirB11 | VF |
| HPPC_RS07470 () | 1550705..1551160 | + | 456 | WP_000795446.1 | hypothetical protein | - |
| HPPC_RS07475 () | 1551157..1551447 | + | 291 | WP_000159813.1 | hypothetical protein | - |
| HPPC_RS07480 () | 1551448..1552005 | + | 558 | WP_001167795.1 | hypothetical protein | - |
| HPPC_RS07485 () | 1552006..1553754 | + | 1749 | WP_000570348.1 | Conjugal transfer protein TraG | VF |
| HPPC_RS07490 () | 1554266..1554547 | - | 282 | WP_000921939.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| HPPC_RS07495 () | 1554540..1554854 | - | 315 | WP_000073113.1 | hypothetical protein | Antitoxin Detail |
| HPPC_RS07500 () | 1555149..1557059 | + | 1911 | WP_001162721.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HPPC_RS07505 () | 1557084..1558256 | - | 1173 | WP_000753635.1 | hypothetical protein | - |
| HPPC_RS07510 () | 1558300..1558584 | - | 285 | WP_000394659.1 | hypothetical protein ; Integrase | Integrase |
| HPPC_RS07515 () | 1558663..1559319 | - | 657 | WP_000587383.1 | ParA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|