MGE detailed information
MGE type: Genomic_island MGE length: 12220 bp
Accession: NC_014364 Location: 727333..739552 Organism: Spirochaeta smaragdinae DSM 11293 Replicon: chromosome
Accession: NC_014364 Location: 727333..739552 Organism: Spirochaeta smaragdinae DSM 11293 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPIRS_RS03485 () | 722467..722709 | - | 243 | WP_013253291.1 | tail fiber protein | - |
| SPIRS_RS03490 () | 723050..724726 | + | 1677 | WP_013253292.1 | phosphatidylinositol-specific phospholipase C domain-containing protein | - |
| SPIRS_RS03495 () | 724712..725761 | - | 1050 | WP_013253293.1 | IS3 family transposase | - |
| SPIRS_RS03500 () | 725785..726265 | - | 481 | Protein_686 | transposase | - |
| SPIRS_RS03505 () | 726326..726994 | + | 669 | WP_013253294.1 | RICIN domain-containing protein | - |
| SPIRS_RS03510 () | 727108..727332 | - | 225 | WP_013253295.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SPIRS_RS03515 () | 727333..727725 | - | 393 | WP_013253296.1 | type II toxin-antitoxin system VapC family toxin | - |
| SPIRS_RS22070 () | 727710..727952 | - | 243 | WP_083771448.1 | transposase | - |
| SPIRS_RS03520 () | 728069..728305 | - | 237 | WP_049784581.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| SPIRS_RS03525 () | 728309..728587 | - | 279 | WP_013253297.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SPIRS_RS03535 () | 728890..729198 | + | 309 | WP_013253298.1 | nucleotidyltransferase domain-containing protein | - |
| SPIRS_RS03540 () | 729373..729615 | + | 243 | WP_013253299.1 | hypothetical protein | - |
| SPIRS_RS22080 () | 729612..729824 | + | 213 | WP_049784582.1 | hypothetical protein | - |
| SPIRS_RS03550 () | 730021..730443 | - | 423 | WP_013253300.1 | PIN domain-containing protein | - |
| SPIRS_RS03555 () | 730622..730945 | - | 324 | WP_171814800.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| SPIRS_RS03560 () | 730939..731187 | - | 249 | WP_013253302.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SPIRS_RS03565 () | 731245..732255 | - | 1011 | WP_013253303.1 | LacI family DNA-binding transcriptional regulator | - |
| SPIRS_RS03570 () | 732490..733497 | + | 1008 | WP_013253304.1 | substrate-binding domain-containing protein | - |
| SPIRS_RS03575 () | 733586..735088 | + | 1503 | WP_013253305.1 | Ribose import ATP-binding protein RbsA | VF |
| SPIRS_RS03580 () | 735085..736062 | + | 978 | WP_013253306.1 | ABC transporter permease | - |
| SPIRS_RS03585 () | 736073..737146 | + | 1074 | WP_013253307.1 | Gfo/Idh/MocA family oxidoreductase | - |
| SPIRS_RS03590 () | 737159..738148 | + | 990 | WP_013253308.1 | sugar phosphate isomerase/epimerase | - |
| SPIRS_RS03595 () | 738500..739552 | + | 1053 | WP_013253309.1 | acyltransferase family protein | - |
| SPIRS_RS03600 () | 739549..740586 | + | 1038 | WP_013253310.1 | glycosyltransferase | - |
| SPIRS_RS03605 () | 740595..741875 | + | 1281 | WP_013253311.1 | hypothetical protein | - |
| SPIRS_RS03610 () | 741875..742639 | + | 765 | WP_013253312.1 | glycosyltransferase | - |
| SPIRS_RS03615 () | 742636..743328 | + | 693 | WP_013253313.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|