MGE detailed information
MGE type: Genomic_island MGE length: 15750 bp
Accession: NC_014228 Location: 4072526..4088275 Organism: Xenorhabdus nematophila ATCC 19061 Replicon: chromosome
Accession: NC_014228 Location: 4072526..4088275 Organism: Xenorhabdus nematophila ATCC 19061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XNC1_RS17870 (XNC1_4221) | 4068052..4068585 | + | 534 | WP_013185541.1 | hypothetical protein | - |
| XNC1_RS17875 (XNC1_4222) | 4068578..4069498 | + | 921 | WP_013185542.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XNC1_RS17880 (XNC1_4223) | 4069778..4070662 | + | 885 | WP_013184177.1 | IS982 family transposase | - |
| XNC1_RS17885 (XNC1_4225) | 4071091..4072038 | + | 948 | WP_010847716.1 | hypothetical protein | - |
| XNC1_RS23040 | 4072442..4072952 | - | 511 | Protein_3545 | N-acetyltransferase | - |
| XNC1_RS23375 (XNC1_4227) | 4072936..4073109 | - | 174 | WP_013185544.1 | hypothetical protein | - |
| XNC1_RS17895 (XNC1_4228) | 4073153..4073845 | - | 693 | WP_013185545.1 | amino acid racemase | - |
| XNC1_RS17900 (XNC1_4229) | 4073974..4074864 | + | 891 | WP_013185546.1 | LysR family transcriptional regulator | - |
| XNC1_RS17905 (XNC1_4230) | 4075019..4076299 | - | 1281 | WP_013185547.1 | dicarboxylate/amino acid:cation symporter | - |
| XNC1_RS17910 (XNC1_4231) | 4076692..4077990 | - | 1299 | WP_013185548.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| XNC1_RS17915 (XNC1_4232) | 4077991..4078242 | - | 252 | WP_010847709.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| XNC1_RS17920 (XNC1_4233) | 4078346..4079083 | + | 738 | Protein_3552 | IS630 family transposase ISCARN25 | Transposase |
| XNC1_RS17925 (XNC1_4234) | 4079223..4080263 | - | 1041 | WP_013185550.1 | IS630 family transposase ISPlu16 | Transposase |
| XNC1_RS17935 (XNC1_4236) | 4080959..4081720 | + | 762 | WP_013183573.1 | IS5 family transposase ISSod6 | Transposase |
| XNC1_RS17940 (XNC1_4237) | 4081686..4082969 | - | 1284 | WP_013185552.1 | serine hydroxymethyltransferase | - |
| XNC1_RS17945 (XNC1_4238) | 4083098..4084291 | - | 1194 | WP_013185553.1 | MFS transporter | - |
| XNC1_RS17950 (XNC1_4239) | 4084296..4084901 | - | 606 | WP_013185554.1 | phosphoribosylglycinamide formyltransferase | - |
| XNC1_RS17955 (XNC1_4240) | 4084901..4086187 | - | 1287 | WP_050986650.1 | amidohydrolase family protein | - |
| XNC1_RS17960 (XNC1_4241) | 4086177..4086857 | - | 681 | WP_013185556.1 | HAD family hydrolase | - |
| XNC1_RS17965 (XNC1_4242) | 4086850..4087407 | - | 558 | WP_013185557.1 | DUF84 family protein | - |
| XNC1_RS23830 (XNC1_4243) | 4087397..4087759 | - | 363 | WP_197541247.1 | hypothetical protein | - |
| XNC1_RS23835 | 4087769..4088095 | - | 327 | WP_197541264.1 | hypothetical protein | - |
| XNC1_RS23840 (XNC1_4245) | 4088108..4088275 | - | 168 | WP_013185559.1 | hypothetical protein | - |
| XNC1_RS17975 (XNC1_4247) | 4089049..4090073 | - | 1025 | Protein_3564 | hypothetical protein | - |
| XNC1_RS17980 (XNC1_4248) | 4090077..4090271 | - | 195 | WP_013185560.1 | hypothetical protein | - |
| XNC1_RS17985 (XNC1_4249) | 4090495..4090674 | + | 180 | WP_013185561.1 | hypothetical protein | - |
| XNC1_RS17990 (XNC1_4250) | 4090848..4091057 | - | 210 | WP_013185562.1 | AlpA family transcriptional regulator | - |
| XNC1_RS17995 (XNC1_4251) | 4091211..4092467 | - | 1257 | WP_013185563.1 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xenorhabdus nematophila AN6/1 | Genomic island | TA285559 | NZ_LN681227 | 4072040..4087789 | 0 |